RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
COPB2-212ENST00000514508 ABCA3Q99758 1704 aa17.4■□□□□ 0.38
COPB2-212ENST00000514508 USP6P35125 1406 aa17.39■□□□□ 0.38
COPB2-212ENST00000514508 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
COPB2-212ENST00000514508 NGLY1Q96IV0 654 aa17.38■□□□□ 0.37
COPB2-212ENST00000514508 AFF2P51816 1311 aa17.38■□□□□ 0.37
COPB2-212ENST00000514508 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
COPB2-212ENST00000514508 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
COPB2-212ENST00000514508 CABLES1Q8TDN4 633 aa17.37■□□□□ 0.37
COPB2-212ENST00000514508 CPSF1Q10570 1443 aaKnown RBP17.37■□□□□ 0.37
COPB2-212ENST00000514508 CRYBG1Q9Y4K1 1723 aa17.36■□□□□ 0.37
COPB2-212ENST00000514508 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
COPB2-212ENST00000514508 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
COPB2-212ENST00000514508 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
COPB2-212ENST00000514508 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
COPB2-212ENST00000514508 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
COPB2-212ENST00000514508 PLEKHG5O94827 1062 aa17.35■□□□□ 0.37
COPB2-212ENST00000514508 POTEAQ6S8J7 498 aa17.35■□□□□ 0.37
COPB2-212ENST00000514508 SSH2Q76I76 1423 aa17.35■□□□□ 0.37
COPB2-212ENST00000514508 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
COPB2-212ENST00000514508 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
COPB2-212ENST00000514508 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
COPB2-212ENST00000514508 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
COPB2-212ENST00000514508 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
COPB2-212ENST00000514508 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
COPB2-212ENST00000514508 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
COPB2-212ENST00000514508 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
COPB2-212ENST00000514508 TTC21BQ7Z4L5 1316 aa17.32■□□□□ 0.36
COPB2-212ENST00000514508 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
COPB2-212ENST00000514508 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
COPB2-212ENST00000514508 USP21Q9UK80 565 aa17.32■□□□□ 0.36
COPB2-212ENST00000514508 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
COPB2-212ENST00000514508 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
COPB2-212ENST00000514508 PIK3C2AO00443 1686 aa17.3■□□□□ 0.36
COPB2-212ENST00000514508 SLIT2O94813 1529 aa17.3■□□□□ 0.36
COPB2-212ENST00000514508 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
COPB2-212ENST00000514508 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
COPB2-212ENST00000514508 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
COPB2-212ENST00000514508 USP19O94966 1318 aa17.29■□□□□ 0.36
COPB2-212ENST00000514508 NLRP6P59044 892 aa17.29■□□□□ 0.36
COPB2-212ENST00000514508 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
COPB2-212ENST00000514508 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
COPB2-212ENST00000514508 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
COPB2-212ENST00000514508 QTRT2Q9H974 415 aaKnown RBP17.28■□□□□ 0.36
COPB2-212ENST00000514508 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
COPB2-212ENST00000514508 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
COPB2-212ENST00000514508 RXRBP28702 533 aa17.27■□□□□ 0.36
COPB2-212ENST00000514508 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
COPB2-212ENST00000514508 EDC4Q6P2E9 1401 aaKnown RBP17.27■□□□□ 0.35
COPB2-212ENST00000514508 ANKRD36BQ8N2N9 1353 aa17.27■□□□□ 0.35
COPB2-212ENST00000514508 PRDM11Q9NQV5 511 aa17.26■□□□□ 0.35
COPB2-212ENST00000514508 SLIT3O75094 1523 aa17.26■□□□□ 0.35
COPB2-212ENST00000514508 ATRNO75882 1429 aa17.25■□□□□ 0.35
COPB2-212ENST00000514508 GCP02774 474 aa17.25■□□□□ 0.35
COPB2-212ENST00000514508 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
COPB2-212ENST00000514508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
COPB2-212ENST00000514508 MYOM1P52179 1685 aa17.25■□□□□ 0.35
COPB2-212ENST00000514508 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
COPB2-212ENST00000514508 USP54Q70EL1 1684 aa17.24■□□□□ 0.35
COPB2-212ENST00000514508 CPDO75976 1380 aa17.24■□□□□ 0.35
COPB2-212ENST00000514508 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
COPB2-212ENST00000514508 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
COPB2-212ENST00000514508 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
COPB2-212ENST00000514508 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
COPB2-212ENST00000514508 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
COPB2-212ENST00000514508 BTG4Q9NY30 223 aa17.22■□□□□ 0.35
COPB2-212ENST00000514508 NME9Q86XW9 330 aa17.21■□□□□ 0.35
COPB2-212ENST00000514508 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
COPB2-212ENST00000514508 VPS72Q15906 364 aa17.2■□□□□ 0.34
COPB2-212ENST00000514508 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
COPB2-212ENST00000514508 SOCS7O14512 581 aa17.19■□□□□ 0.34
COPB2-212ENST00000514508 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
COPB2-212ENST00000514508 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
COPB2-212ENST00000514508 LMO7Q8WWI1 1683 aa17.17■□□□□ 0.34
COPB2-212ENST00000514508 NFAT5O94916 1531 aa17.16■□□□□ 0.34
COPB2-212ENST00000514508 GLI3P10071 1580 aa17.16■□□□□ 0.34
COPB2-212ENST00000514508 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
COPB2-212ENST00000514508 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
COPB2-212ENST00000514508 C11orf95C9JLR9 678 aaPredicted RBP17.16■□□□□ 0.34
COPB2-212ENST00000514508 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
COPB2-212ENST00000514508 KIF20BQ96Q89 1820 aa17.16■□□□□ 0.34
COPB2-212ENST00000514508 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 RGS12O14924 1447 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 SOX12O15370 315 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 COG3Q96JB2 828 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 COL18A1P39060 1754 aa17.15■□□□□ 0.34
COPB2-212ENST00000514508 EVA1CP58658 441 aa17.14■□□□□ 0.33
COPB2-212ENST00000514508 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
COPB2-212ENST00000514508 LTN1O94822 1766 aa17.13■□□□□ 0.33
COPB2-212ENST00000514508 FYB1O15117 783 aa17.13■□□□□ 0.33
COPB2-212ENST00000514508 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
COPB2-212ENST00000514508 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
COPB2-212ENST00000514508 ABCC6O95255 1503 aa17.12■□□□□ 0.33
COPB2-212ENST00000514508 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
COPB2-212ENST00000514508 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
COPB2-212ENST00000514508 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
COPB2-212ENST00000514508 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms