RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 C8orf37Q96NL8 207 aa20.13■□□□□ 0.81
SNF8-212ENST00000514089 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
SNF8-212ENST00000514089 NLRP6P59044 892 aa20.12■□□□□ 0.81
SNF8-212ENST00000514089 NLRP13Q86W25 1043 aa20.12■□□□□ 0.81
SNF8-212ENST00000514089 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
SNF8-212ENST00000514089 NINLQ9Y2I6 1382 aa20.11■□□□□ 0.81
SNF8-212ENST00000514089 BRD4O60885 1362 aaPredicted RBP20.1■□□□□ 0.81
SNF8-212ENST00000514089 NHSL1Q5SYE7 1610 aa20.1■□□□□ 0.81
SNF8-212ENST00000514089 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
SNF8-212ENST00000514089 USP6P35125 1406 aa20.08■□□□□ 0.8
SNF8-212ENST00000514089 TTC21AQ8NDW8 1320 aa20.06■□□□□ 0.8
SNF8-212ENST00000514089 ZBTB7CA1YPR0 619 aa20.05■□□□□ 0.8
SNF8-212ENST00000514089 RGPD8O14715 1765 aaPredicted RBP20.05■□□□□ 0.8
SNF8-212ENST00000514089 CPSF1Q10570 1443 aaKnown RBP20.04■□□□□ 0.8
SNF8-212ENST00000514089 C11orf95C9JLR9 678 aaPredicted RBP20.04■□□□□ 0.8
SNF8-212ENST00000514089 ZNF772Q68DY9 489 aaPredicted RBP20.04■□□□□ 0.8
SNF8-212ENST00000514089 ITSN1Q15811 1721 aa20.04■□□□□ 0.8
SNF8-212ENST00000514089 SOX12O15370 315 aa20.03■□□□□ 0.8
SNF8-212ENST00000514089 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
SNF8-212ENST00000514089 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
SNF8-212ENST00000514089 NME9Q86XW9 330 aa20.02■□□□□ 0.8
SNF8-212ENST00000514089 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
SNF8-212ENST00000514089 AFF2P51816 1311 aa20.02■□□□□ 0.79
SNF8-212ENST00000514089 GCP02774 474 aa20.01■□□□□ 0.79
SNF8-212ENST00000514089 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
SNF8-212ENST00000514089 PANK3Q9H999 370 aa20.01■□□□□ 0.79
SNF8-212ENST00000514089 PRDM11Q9NQV5 511 aa20.01■□□□□ 0.79
SNF8-212ENST00000514089 USP21Q9UK80 565 aa20.01■□□□□ 0.79
SNF8-212ENST00000514089 COG3Q96JB2 828 aa20■□□□□ 0.79
SNF8-212ENST00000514089 KIF7Q2M1P5 1343 aa20■□□□□ 0.79
SNF8-212ENST00000514089 EDC4Q6P2E9 1401 aaKnown RBP19.99■□□□□ 0.79
SNF8-212ENST00000514089 MED1Q15648 1581 aaPredicted RBP19.99■□□□□ 0.79
SNF8-212ENST00000514089 LRP6O75581 1613 aa19.98■□□□□ 0.79
SNF8-212ENST00000514089 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
SNF8-212ENST00000514089 FAM83GA6ND36 823 aa19.98■□□□□ 0.79
SNF8-212ENST00000514089 ZRANB1Q9UGI0 708 aa19.98■□□□□ 0.79
SNF8-212ENST00000514089 TOPAZ1Q8N9V7 1692 aa19.97■□□□□ 0.79
SNF8-212ENST00000514089 SSH2Q76I76 1423 aa19.97■□□□□ 0.79
SNF8-212ENST00000514089 CCDC9Q9Y3X0 531 aaKnown RBP19.97■□□□□ 0.79
SNF8-212ENST00000514089 EVA1CP58658 441 aa19.96■□□□□ 0.79
SNF8-212ENST00000514089 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
SNF8-212ENST00000514089 QTRT2Q9H974 415 aaKnown RBP19.96■□□□□ 0.79
SNF8-212ENST00000514089 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
SNF8-212ENST00000514089 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
SNF8-212ENST00000514089 FNBP4Q8N3X1 1017 aaPredicted RBP19.95■□□□□ 0.78
SNF8-212ENST00000514089 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
SNF8-212ENST00000514089 KNSTRNQ9Y448 316 aa19.95■□□□□ 0.78
SNF8-212ENST00000514089 BTG4Q9NY30 223 aa19.94■□□□□ 0.78
SNF8-212ENST00000514089 RGS17Q9UGC6 210 aaPredicted RBP19.94■□□□□ 0.78
SNF8-212ENST00000514089 USP19O94966 1318 aa19.94■□□□□ 0.78
SNF8-212ENST00000514089 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
SNF8-212ENST00000514089 KIAA0232Q92628 1395 aa19.94■□□□□ 0.78
SNF8-212ENST00000514089 FYB1O15117 783 aa19.93■□□□□ 0.78
SNF8-212ENST00000514089 UNC5CLQ8IV45 518 aa19.93■□□□□ 0.78
SNF8-212ENST00000514089 TRPC5Q9UL62 973 aaPredicted RBP19.93■□□□□ 0.78
SNF8-212ENST00000514089 RXRBP28702 533 aa19.92■□□□□ 0.78
SNF8-212ENST00000514089 WASHC2AQ641Q2 1341 aa19.92■□□□□ 0.78
SNF8-212ENST00000514089 CCDC7Q96M83 1385 aa19.92■□□□□ 0.78
SNF8-212ENST00000514089 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
SNF8-212ENST00000514089 STRN4Q9NRL3 753 aa19.91■□□□□ 0.78
SNF8-212ENST00000514089 NSD3Q9BZ95 1437 aa19.91■□□□□ 0.78
SNF8-212ENST00000514089 USP31Q70CQ4 1352 aa19.9■□□□□ 0.78
SNF8-212ENST00000514089 COL22A1Q8NFW1 1626 aaPredicted RBP19.9■□□□□ 0.78
SNF8-212ENST00000514089 TRPM3Q9HCF6 1732 aaPredicted RBP19.89■□□□□ 0.77
SNF8-212ENST00000514089 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
SNF8-212ENST00000514089 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
SNF8-212ENST00000514089 AMPHP49418 695 aa19.86■□□□□ 0.77
SNF8-212ENST00000514089 RBM6P78332 1123 aaKnown RBP19.86■□□□□ 0.77
SNF8-212ENST00000514089 ARHGEF25Q86VW2 580 aa19.86■□□□□ 0.77
SNF8-212ENST00000514089 CPDO75976 1380 aa19.85■□□□□ 0.77
SNF8-212ENST00000514089 TNNT2P45379 298 aaPredicted RBP19.85■□□□□ 0.77
SNF8-212ENST00000514089 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
SNF8-212ENST00000514089 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
SNF8-212ENST00000514089 A0A0G2JS52 829 aa19.84■□□□□ 0.77
SNF8-212ENST00000514089 MYT1Q01538 1121 aa19.84■□□□□ 0.77
SNF8-212ENST00000514089 GJD4Q96KN9 370 aaPredicted RBP19.84■□□□□ 0.77
SNF8-212ENST00000514089 PPM1GO15355 546 aaPredicted RBP19.83■□□□□ 0.77
SNF8-212ENST00000514089 VPS72Q15906 364 aa19.83■□□□□ 0.77
SNF8-212ENST00000514089 FBLN1P23142 703 aa19.82■□□□□ 0.76
SNF8-212ENST00000514089 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
SNF8-212ENST00000514089 AATKQ6ZMQ8 1374 aa19.82■□□□□ 0.76
SNF8-212ENST00000514089 BCL9LQ86UU0 1499 aa19.81■□□□□ 0.76
SNF8-212ENST00000514089 RRS1Q15050 365 aaKnown RBP19.8■□□□□ 0.76
SNF8-212ENST00000514089 CC2D1BQ5T0F9 858 aaKnown RBP19.8■□□□□ 0.76
SNF8-212ENST00000514089 TOM1L2Q6ZVM7 507 aa19.8■□□□□ 0.76
SNF8-212ENST00000514089 AKAP12Q02952 1782 aa19.8■□□□□ 0.76
SNF8-212ENST00000514089 ILDR2Q71H61 639 aa19.79■□□□□ 0.76
SNF8-212ENST00000514089 LTV1Q96GA3 475 aaPredicted RBP19.79■□□□□ 0.76
SNF8-212ENST00000514089 AXIN2Q9Y2T1 843 aa19.79■□□□□ 0.76
SNF8-212ENST00000514089 SLIT2O94813 1529 aa19.79■□□□□ 0.76
SNF8-212ENST00000514089 OVOS2A0A0J9YW53 1432 aa19.78■□□□□ 0.76
SNF8-212ENST00000514089 OVOS2Q6IE36 1432 aa19.78■□□□□ 0.76
SNF8-212ENST00000514089 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
SNF8-212ENST00000514089 LARP1Q6PKG0 1096 aaKnown RBP19.78■□□□□ 0.76
SNF8-212ENST00000514089 SLIT3O75094 1523 aa19.77■□□□□ 0.76
SNF8-212ENST00000514089 MON2Q7Z3U7 1717 aa19.77■□□□□ 0.76
SNF8-212ENST00000514089 IP6K1Q92551 441 aa19.77■□□□□ 0.76
SNF8-212ENST00000514089 PIK3C2AO00443 1686 aa19.77■□□□□ 0.76
SNF8-212ENST00000514089 MAP3K19Q56UN5 1328 aa19.76■□□□□ 0.75
SNF8-212ENST00000514089 NSD2O96028 1365 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms