RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	KIAA2012	Q0VF49	1180 aa		13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	CHAMP1	Q96JM3	812 aa		13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	LNPK	Q9C0E8	428 aa		13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	ADCY10	Q96PN6	1610 aa		13.72	□□□□□ -0.21
PDCD6-210	ENST00000513582	SLC12A5	Q9H2X9	1139 aa		13.72	□□□□□ -0.21
PDCD6-210	ENST00000513582	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.72	□□□□□ -0.21
PDCD6-210	ENST00000513582	CEP170	Q5SW79	1584 aa		13.72	□□□□□ -0.21
PDCD6-210	ENST00000513582	ATP10B	O94823	1461 aa		13.72	□□□□□ -0.21
PDCD6-210	ENST00000513582	PKP1	Q13835	747 aa		13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	IPO4	Q8TEX9	1081 aa	Known RBP	13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	ZMYM3	Q14202	1370 aa		13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	ITPRIP	Q8IWB1	547 aa		13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
PDCD6-210	ENST00000513582	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.71	□□□□□ -0.22
PDCD6-210	ENST00000513582	CROCC2	H7BZ55	1655 aa		13.71	□□□□□ -0.22
PDCD6-210	ENST00000513582	MCM5	P33992	734 aa		13.7	□□□□□ -0.22
PDCD6-210	ENST00000513582	MVP	Q14764	893 aa	Known RBP	13.7	□□□□□ -0.22
PDCD6-210	ENST00000513582	KIF2C	Q99661	725 aa		13.7	□□□□□ -0.22
PDCD6-210	ENST00000513582	MAGI2	Q86UL8	1455 aa		13.7	□□□□□ -0.22
PDCD6-210	ENST00000513582	CFAP53	Q96M91	514 aa		13.7	□□□□□ -0.22
PDCD6-210	ENST00000513582	LMBRD1	Q9NUN5	540 aa		13.7	□□□□□ -0.22
PDCD6-210	ENST00000513582	U2AF2	P26368	475 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PDCD6-210	ENST00000513582	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.69	□□□□□ -0.22
PDCD6-210	ENST00000513582	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PDCD6-210	ENST00000513582	NUP160	Q12769	1436 aa		13.69	□□□□□ -0.22
PDCD6-210	ENST00000513582	PRAG1	Q86YV5	1406 aa		13.69	□□□□□ -0.22
PDCD6-210	ENST00000513582	PDCL2	Q8N4E4	241 aa		13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	KIF3A	Q9Y496	699 aa		13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	CCDC141	Q6ZP82	1450 aa		13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	GPT2	Q8TD30	523 aa		13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	ABCC10	Q5T3U5	1492 aa		13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	DZIP1L	Q8IYY4	767 aa	Known RBP	13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	TSR2	Q969E8	191 aa	Known RBP	13.68	□□□□□ -0.22
PDCD6-210	ENST00000513582	SMC4	Q9NTJ3	1288 aa		13.67	□□□□□ -0.22
PDCD6-210	ENST00000513582	AK9	Q5TCS8	1911 aa		13.67	□□□□□ -0.22
PDCD6-210	ENST00000513582	BCL2L12	Q9HB09	334 aa		13.67	□□□□□ -0.22
PDCD6-210	ENST00000513582	TMEM63C	Q9P1W3	806 aa		13.67	□□□□□ -0.22
PDCD6-210	ENST00000513582	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.67	□□□□□ -0.22
PDCD6-210	ENST00000513582	ARHGAP5	Q13017	1502 aa		13.66	□□□□□ -0.22
PDCD6-210	ENST00000513582	GGNBP2	Q9H3C7	697 aa		13.66	□□□□□ -0.22
PDCD6-210	ENST00000513582	ZKSCAN2	Q63HK3	967 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	LRSAM1	Q6UWE0	723 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	CABP2	Q9NPB3	220 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	KDM5D	Q9BY66	1539 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	MTHFS	P49914	203 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	TRPM1	Q7Z4N2	1603 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	TTC12	Q9H892	705 aa	Predicted RBP	13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	KIF16B	Q96L93	1317 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	HMGN5	P82970	282 aa	Known RBP	13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	TAF7L	Q5H9L4	462 aa		13.65	□□□□□ -0.22
PDCD6-210	ENST00000513582	CDC42BPA	Q5VT25	1732 aa		13.65	□□□□□ -0.23
PDCD6-210	ENST00000513582	ABCA8	O94911	1581 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	FBLN1	P23142	703 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.64	□□□□□ -0.23	6e-11	■□□□□ 10
PDCD6-210	ENST00000513582	PRIMPOL	Q96LW4	560 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	FAM135A	Q9P2D6	1515 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	CHMP4A	Q9BY43	222 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	CLASP1	Q7Z460	1538 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	TCP11L2	Q8N4U5	519 aa		13.64	□□□□□ -0.23
PDCD6-210	ENST00000513582	SCAPER	Q9BY12	1400 aa		13.63	□□□□□ -0.23
PDCD6-210	ENST00000513582	KCNJ4	P48050	445 aa		13.63	□□□□□ -0.23
PDCD6-210	ENST00000513582	RAPGEF3	O95398	923 aa		13.63	□□□□□ -0.23
PDCD6-210	ENST00000513582	ARHGEF5	Q12774	1597 aa		13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	NUCB2	P80303	420 aa		13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	PLCB2	Q00722	1185 aa		13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	CLEC17A	Q6ZS10	378 aa		13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	ESF1	Q9H501	851 aa	Known RBP	13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	TBC1D9	Q6ZT07	1266 aa		13.62	□□□□□ -0.23
PDCD6-210	ENST00000513582	ZGPAT	Q8N5A5	531 aa	Known RBP	13.61	□□□□□ -0.23
PDCD6-210	ENST00000513582	ANKRD45	Q5TZF3	282 aa		13.61	□□□□□ -0.23
PDCD6-210	ENST00000513582	KANK1	Q14678	1352 aa		13.61	□□□□□ -0.23
PDCD6-210	ENST00000513582	WDR7	Q9Y4E6	1490 aa		13.61	□□□□□ -0.23
PDCD6-210	ENST00000513582	HDAC1	Q13547	482 aa	Predicted RBP	13.61	□□□□□ -0.23
PDCD6-210	ENST00000513582	PIK3C2G	O75747	1445 aa		13.61	□□□□□ -0.23
PDCD6-210	ENST00000513582	TRIM27	P14373	513 aa		13.6	□□□□□ -0.23
PDCD6-210	ENST00000513582	TAF3	Q5VWG9	929 aa		13.6	□□□□□ -0.23
PDCD6-210	ENST00000513582	PIBF1	Q8WXW3	757 aa		13.6	□□□□□ -0.23
PDCD6-210	ENST00000513582	ADGRF5	Q8IZF2	1346 aa		13.6	□□□□□ -0.23
PDCD6-210	ENST00000513582	CYB5RL	Q6IPT4	315 aa		13.6	□□□□□ -0.23
PDCD6-210	ENST00000513582	CHD1L	Q86WJ1	897 aa		13.6	□□□□□ -0.23
PDCD6-210	ENST00000513582	USP25	Q9UHP3	1055 aa		13.59	□□□□□ -0.23
PDCD6-210	ENST00000513582	HMOX1	P09601	288 aa		13.59	□□□□□ -0.23
PDCD6-210	ENST00000513582	IRX5	P78411	483 aa	Predicted RBP	13.59	□□□□□ -0.23
PDCD6-210	ENST00000513582	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	4e-8	■■■■□ 22.3
PDCD6-210	ENST00000513582	C14orf37	Q86TY3	774 aa		13.59	□□□□□ -0.23
PDCD6-210	ENST00000513582	TSPY26P	Q9H489	355 aa		13.59	□□□□□ -0.23
PDCD6-210	ENST00000513582	GPRASP1	Q5JY77	1395 aa		13.58	□□□□□ -0.23
PDCD6-210	ENST00000513582	NUCB1	Q02818	461 aa		13.58	□□□□□ -0.24
PDCD6-210	ENST00000513582	C1orf115	Q9H7X2	142 aa		13.58	□□□□□ -0.24
PDCD6-210	ENST00000513582	DDX19B	Q9UMR2	479 aa		13.58	□□□□□ -0.24
PDCD6-210	ENST00000513582	ABCC2	Q92887	1545 aa		13.58	□□□□□ -0.24
PDCD6-210	ENST00000513582	RIOK3	O14730	519 aa	Known RBP	13.57	□□□□□ -0.24
PDCD6-210	ENST00000513582	TMEM57	Q8N5G2	664 aa		13.57	□□□□□ -0.24
PDCD6-210	ENST00000513582	BMP2KL	Q5H9B9	411 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 2126.3 ms