RNA–Protein interactions for RNA: ENST00000513274.5

COPB2-211, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-211ENST00000513274 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
COPB2-211ENST00000513274 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
COPB2-211ENST00000513274 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
COPB2-211ENST00000513274 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
COPB2-211ENST00000513274 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
COPB2-211ENST00000513274 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
COPB2-211ENST00000513274 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
COPB2-211ENST00000513274 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
COPB2-211ENST00000513274 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
COPB2-211ENST00000513274 ITSN1Q15811 1721 aa16.64■□□□□ 0.25
COPB2-211ENST00000513274 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
COPB2-211ENST00000513274 BLMP54132 1417 aaPredicted RBP16.63■□□□□ 0.25
COPB2-211ENST00000513274 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
COPB2-211ENST00000513274 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
COPB2-211ENST00000513274 SRCAPQ6ZRS2 3230 aa16.63■□□□□ 0.25
COPB2-211ENST00000513274 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
COPB2-211ENST00000513274 ATP7BP35670 1465 aa16.61■□□□□ 0.25
COPB2-211ENST00000513274 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
COPB2-211ENST00000513274 ACEP12821 1306 aa16.61■□□□□ 0.25
COPB2-211ENST00000513274 CRYBG1Q9Y4K1 1723 aa16.61■□□□□ 0.25
COPB2-211ENST00000513274 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
COPB2-211ENST00000513274 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
COPB2-211ENST00000513274 SRPK2P78362 688 aaKnown RBP16.58■□□□□ 0.24
COPB2-211ENST00000513274 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
COPB2-211ENST00000513274 SPATA31A5Q5VU36 1347 aa16.58■□□□□ 0.24
COPB2-211ENST00000513274 SPATA31A7Q8IWB4 1347 aa16.58■□□□□ 0.24
COPB2-211ENST00000513274 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.24
COPB2-211ENST00000513274 CABP2Q9NPB3 220 aa16.57■□□□□ 0.24
COPB2-211ENST00000513274 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
COPB2-211ENST00000513274 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
COPB2-211ENST00000513274 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
COPB2-211ENST00000513274 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
COPB2-211ENST00000513274 EVA1CP58658 441 aa16.55■□□□□ 0.24
COPB2-211ENST00000513274 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
COPB2-211ENST00000513274 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
COPB2-211ENST00000513274 PLEKHG3A1L390 1219 aa16.54■□□□□ 0.24
COPB2-211ENST00000513274 ZBTB7CA1YPR0 619 aa16.54■□□□□ 0.24
COPB2-211ENST00000513274 BAG6P46379 1132 aa16.54■□□□□ 0.24
COPB2-211ENST00000513274 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
COPB2-211ENST00000513274 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
COPB2-211ENST00000513274 POLR3AO14802 1390 aaPredicted RBP16.53■□□□□ 0.24
COPB2-211ENST00000513274 SPATA31A1Q5TZJ5 1347 aa16.53■□□□□ 0.24
COPB2-211ENST00000513274 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
COPB2-211ENST00000513274 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
COPB2-211ENST00000513274 PPIP5K1Q6PFW1 1433 aa16.52■□□□□ 0.23
COPB2-211ENST00000513274 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
COPB2-211ENST00000513274 LARP1Q6PKG0 1096 aaKnown RBP16.5■□□□□ 0.23
COPB2-211ENST00000513274 CABP1Q9NZU7 370 aa16.5■□□□□ 0.23
COPB2-211ENST00000513274 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
COPB2-211ENST00000513274 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
COPB2-211ENST00000513274 TRIM37O94972 964 aa16.49■□□□□ 0.23
COPB2-211ENST00000513274 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
COPB2-211ENST00000513274 GCP02774 474 aa16.48■□□□□ 0.23
COPB2-211ENST00000513274 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
COPB2-211ENST00000513274 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
COPB2-211ENST00000513274 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
COPB2-211ENST00000513274 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
COPB2-211ENST00000513274 NLRP6P59044 892 aa16.46■□□□□ 0.23
COPB2-211ENST00000513274 PDE3BQ13370 1112 aa16.46■□□□□ 0.23
COPB2-211ENST00000513274 R3HDM1Q15032 1099 aaKnown RBP16.45■□□□□ 0.22
COPB2-211ENST00000513274 TNS1Q9HBL0 1735 aaKnown RBP16.45■□□□□ 0.22
COPB2-211ENST00000513274 USP19O94966 1318 aa16.45■□□□□ 0.22
COPB2-211ENST00000513274 APBA3O96018 575 aa16.44■□□□□ 0.22
COPB2-211ENST00000513274 FAM196AQ6ZSG2 479 aa16.44■□□□□ 0.22
COPB2-211ENST00000513274 SOX12O15370 315 aa16.43■□□□□ 0.22
COPB2-211ENST00000513274 TCP11L2Q8N4U5 519 aa16.43■□□□□ 0.22
COPB2-211ENST00000513274 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
COPB2-211ENST00000513274 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
COPB2-211ENST00000513274 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
COPB2-211ENST00000513274 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
COPB2-211ENST00000513274 ROCK2O75116 1388 aaKnown RBP16.41■□□□□ 0.22
COPB2-211ENST00000513274 CPDO75976 1380 aa16.41■□□□□ 0.22
COPB2-211ENST00000513274 USP6P35125 1406 aa16.41■□□□□ 0.22
COPB2-211ENST00000513274 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
COPB2-211ENST00000513274 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
COPB2-211ENST00000513274 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
COPB2-211ENST00000513274 COL5A2P05997 1499 aaPredicted RBP16.38■□□□□ 0.21
COPB2-211ENST00000513274 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
COPB2-211ENST00000513274 AXIN2Q9Y2T1 843 aa16.37■□□□□ 0.21
COPB2-211ENST00000513274 THRAP3Q9Y2W1 955 aaKnown RBP16.37■□□□□ 0.21
COPB2-211ENST00000513274 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
COPB2-211ENST00000513274 LRP5O75197 1615 aa16.37■□□□□ 0.21
COPB2-211ENST00000513274 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
COPB2-211ENST00000513274 AKAP12Q02952 1782 aa16.36■□□□□ 0.21
COPB2-211ENST00000513274 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
COPB2-211ENST00000513274 CRB1P82279 1406 aa16.36■□□□□ 0.21
COPB2-211ENST00000513274 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
COPB2-211ENST00000513274 SLIT3O75094 1523 aa16.35■□□□□ 0.21
COPB2-211ENST00000513274 COL18A1P39060 1754 aa16.34■□□□□ 0.21
COPB2-211ENST00000513274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
COPB2-211ENST00000513274 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
COPB2-211ENST00000513274 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.21
COPB2-211ENST00000513274 CSB-PGBD3P0DP91 1061 aa16.33■□□□□ 0.2
COPB2-211ENST00000513274 KTN1Q86UP2 1357 aaKnown RBP16.33■□□□□ 0.2
COPB2-211ENST00000513274 DDB1Q16531 1140 aa16.32■□□□□ 0.2
COPB2-211ENST00000513274 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
COPB2-211ENST00000513274 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
COPB2-211ENST00000513274 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
COPB2-211ENST00000513274 NBPF14Q5TI25 921 aa16.31■□□□□ 0.2
COPB2-211ENST00000513274 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms