RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNHG4-207ENST00000513259 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
SNHG4-207ENST00000513259 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
SNHG4-207ENST00000513259 LRP5O75197 1615 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 A0A0G2JS52 829 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 MYT1Q01538 1121 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
SNHG4-207ENST00000513259 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
SNHG4-207ENST00000513259 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
SNHG4-207ENST00000513259 ARHGEF10O15013 1369 aa13.23□□□□□ -0.29
SNHG4-207ENST00000513259 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
SNHG4-207ENST00000513259 HRCP23327 699 aa13.23□□□□□ -0.29
SNHG4-207ENST00000513259 BAG6P46379 1132 aa13.23□□□□□ -0.29
SNHG4-207ENST00000513259 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
SNHG4-207ENST00000513259 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
SNHG4-207ENST00000513259 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
SNHG4-207ENST00000513259 BTG4Q9NY30 223 aa13.22□□□□□ -0.29
SNHG4-207ENST00000513259 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
SNHG4-207ENST00000513259 POGKQ9P215 609 aa13.21□□□□□ -0.29
SNHG4-207ENST00000513259 TRPM3Q9HCF6 1732 aaPredicted RBP13.2□□□□□ -0.3
SNHG4-207ENST00000513259 COL14A1Q05707 1796 aaKnown RBP13.19□□□□□ -0.3
SNHG4-207ENST00000513259 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
SNHG4-207ENST00000513259 R3HDM1Q15032 1099 aaKnown RBP13.18□□□□□ -0.3
SNHG4-207ENST00000513259 HIRIP3Q9BW71 556 aaPredicted RBP13.18□□□□□ -0.3
SNHG4-207ENST00000513259 ANKARQ7Z5J8 1434 aa13.18□□□□□ -0.3
SNHG4-207ENST00000513259 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
SNHG4-207ENST00000513259 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
SNHG4-207ENST00000513259 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
SNHG4-207ENST00000513259 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
SNHG4-207ENST00000513259 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 TRAK1Q9UPV9 953 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 GPRASP1Q5JY77 1395 aa13.16□□□□□ -0.3
SNHG4-207ENST00000513259 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
SNHG4-207ENST00000513259 ACIN1Q9UKV3 1341 aaKnown RBP13.15□□□□□ -0.3
SNHG4-207ENST00000513259 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
SNHG4-207ENST00000513259 TNS1Q9HBL0 1735 aaKnown RBP13.15□□□□□ -0.3
SNHG4-207ENST00000513259 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
SNHG4-207ENST00000513259 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.31
SNHG4-207ENST00000513259 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
SNHG4-207ENST00000513259 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
SNHG4-207ENST00000513259 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
SNHG4-207ENST00000513259 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
SNHG4-207ENST00000513259 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
SNHG4-207ENST00000513259 WASLO00401 505 aaPredicted RBP13.12□□□□□ -0.31
SNHG4-207ENST00000513259 TRIM37O94972 964 aa13.12□□□□□ -0.31
SNHG4-207ENST00000513259 CHRNA2Q15822 529 aa13.12□□□□□ -0.31
SNHG4-207ENST00000513259 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
SNHG4-207ENST00000513259 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
SNHG4-207ENST00000513259 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
SNHG4-207ENST00000513259 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
SNHG4-207ENST00000513259 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
SNHG4-207ENST00000513259 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
SNHG4-207ENST00000513259 APBA3O96018 575 aa13.1□□□□□ -0.31
SNHG4-207ENST00000513259 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
SNHG4-207ENST00000513259 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
SNHG4-207ENST00000513259 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
SNHG4-207ENST00000513259 NUTM2GQ5VZR2 741 aa13.09□□□□□ -0.31
SNHG4-207ENST00000513259 FAM196AQ6ZSG2 479 aa13.09□□□□□ -0.31
SNHG4-207ENST00000513259 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
SNHG4-207ENST00000513259 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
SNHG4-207ENST00000513259 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
SNHG4-207ENST00000513259 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
SNHG4-207ENST00000513259 EVA1CP58658 441 aa13.06□□□□□ -0.32
SNHG4-207ENST00000513259 ITSN1Q15811 1721 aa13.05□□□□□ -0.32
SNHG4-207ENST00000513259 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
SNHG4-207ENST00000513259 RREB1Q92766 1687 aa13.05□□□□□ -0.32
SNHG4-207ENST00000513259 ATP7BP35670 1465 aa13.04□□□□□ -0.32
SNHG4-207ENST00000513259 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
SNHG4-207ENST00000513259 CDK19Q9BWU1 502 aa13.04□□□□□ -0.32
SNHG4-207ENST00000513259 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
SNHG4-207ENST00000513259 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
SNHG4-207ENST00000513259 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
SNHG4-207ENST00000513259 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
SNHG4-207ENST00000513259 NBPF8Q3BBV2 869 aa13.03□□□□□ -0.32
SNHG4-207ENST00000513259 NBPF14Q5TI25 921 aa13.03□□□□□ -0.32
SNHG4-207ENST00000513259 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
SNHG4-207ENST00000513259 REM2Q8IYK8 340 aaPredicted RBP13.03□□□□□ -0.32
SNHG4-207ENST00000513259 ACEP12821 1306 aa13.03□□□□□ -0.32
SNHG4-207ENST00000513259 SSH2Q76I76 1423 aa13.03□□□□□ -0.32
SNHG4-207ENST00000513259 YY1P25490 414 aa13.02□□□□□ -0.33
SNHG4-207ENST00000513259 POTEHQ6S545 545 aa13.01□□□□□ -0.33
SNHG4-207ENST00000513259 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
SNHG4-207ENST00000513259 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
SNHG4-207ENST00000513259 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
SNHG4-207ENST00000513259 RAB3GAP2Q9H2M9 1393 aa13.01□□□□□ -0.33
SNHG4-207ENST00000513259 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
SNHG4-207ENST00000513259 ABTB2Q8N961 1025 aa13□□□□□ -0.33
SNHG4-207ENST00000513259 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
SNHG4-207ENST00000513259 LMO7Q8WWI1 1683 aa12.99□□□□□ -0.33
SNHG4-207ENST00000513259 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
SNHG4-207ENST00000513259 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
SNHG4-207ENST00000513259 STAC3Q96MF2 364 aa12.99□□□□□ -0.33
SNHG4-207ENST00000513259 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms