RNA–Protein interactions for RNA: ENST00000513020.5

SH3BP2-224, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-224ENST00000513020 PLCH1Q4KWH8 1693 aa16.92■□□□□ 0.3
SH3BP2-224ENST00000513020 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
SH3BP2-224ENST00000513020 USP21Q9UK80 565 aa16.92■□□□□ 0.3
SH3BP2-224ENST00000513020 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
SH3BP2-224ENST00000513020 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
SH3BP2-224ENST00000513020 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
SH3BP2-224ENST00000513020 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
SH3BP2-224ENST00000513020 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.9■□□□□ 0.3
SH3BP2-224ENST00000513020 RXRBP28702 533 aa16.9■□□□□ 0.3
SH3BP2-224ENST00000513020 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
SH3BP2-224ENST00000513020 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.3
SH3BP2-224ENST00000513020 SLIT2O94813 1529 aa16.89■□□□□ 0.29
SH3BP2-224ENST00000513020 USP6P35125 1406 aa16.88■□□□□ 0.29
SH3BP2-224ENST00000513020 ST20-MTHFSA0A0A6YYL1 179 aa16.88■□□□□ 0.29
SH3BP2-224ENST00000513020 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
SH3BP2-224ENST00000513020 USP47Q96K76 1375 aa16.88■□□□□ 0.29
SH3BP2-224ENST00000513020 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
SH3BP2-224ENST00000513020 NRKQ7Z2Y5 1582 aa16.87■□□□□ 0.29
SH3BP2-224ENST00000513020 ATRNO75882 1429 aa16.87■□□□□ 0.29
SH3BP2-224ENST00000513020 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
SH3BP2-224ENST00000513020 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
SH3BP2-224ENST00000513020 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
SH3BP2-224ENST00000513020 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
SH3BP2-224ENST00000513020 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
SH3BP2-224ENST00000513020 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
SH3BP2-224ENST00000513020 NRAPQ86VF7 1730 aa16.85■□□□□ 0.29
SH3BP2-224ENST00000513020 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
SH3BP2-224ENST00000513020 TESK2Q96S53 571 aa16.85■□□□□ 0.29
SH3BP2-224ENST00000513020 RGS12O14924 1447 aa16.85■□□□□ 0.29
SH3BP2-224ENST00000513020 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
SH3BP2-224ENST00000513020 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.28
SH3BP2-224ENST00000513020 SSH2Q76I76 1423 aa16.83■□□□□ 0.28
SH3BP2-224ENST00000513020 UNC5CLQ8IV45 518 aa16.83■□□□□ 0.28
SH3BP2-224ENST00000513020 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
SH3BP2-224ENST00000513020 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
SH3BP2-224ENST00000513020 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
SH3BP2-224ENST00000513020 GLI3P10071 1580 aa16.81■□□□□ 0.28
SH3BP2-224ENST00000513020 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
SH3BP2-224ENST00000513020 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
SH3BP2-224ENST00000513020 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
SH3BP2-224ENST00000513020 USP19O94966 1318 aa16.8■□□□□ 0.28
SH3BP2-224ENST00000513020 NLRP13Q86W25 1043 aa16.8■□□□□ 0.28
SH3BP2-224ENST00000513020 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
SH3BP2-224ENST00000513020 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
SH3BP2-224ENST00000513020 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
SH3BP2-224ENST00000513020 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
SH3BP2-224ENST00000513020 GJD4Q96KN9 370 aaPredicted RBP16.79■□□□□ 0.28
SH3BP2-224ENST00000513020 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
SH3BP2-224ENST00000513020 SLIT3O75094 1523 aa16.79■□□□□ 0.28
SH3BP2-224ENST00000513020 NLRP6P59044 892 aa16.78■□□□□ 0.28
SH3BP2-224ENST00000513020 TMF1P82094 1093 aa16.78■□□□□ 0.28
SH3BP2-224ENST00000513020 CHRNA2Q15822 529 aa16.78■□□□□ 0.28
SH3BP2-224ENST00000513020 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
SH3BP2-224ENST00000513020 A0A1W2PP64 1363 aa16.77■□□□□ 0.28
SH3BP2-224ENST00000513020 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
SH3BP2-224ENST00000513020 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
SH3BP2-224ENST00000513020 GCP02774 474 aa16.76■□□□□ 0.27
SH3BP2-224ENST00000513020 VPS72Q15906 364 aa16.76■□□□□ 0.27
SH3BP2-224ENST00000513020 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
SH3BP2-224ENST00000513020 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
SH3BP2-224ENST00000513020 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
SH3BP2-224ENST00000513020 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
SH3BP2-224ENST00000513020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
SH3BP2-224ENST00000513020 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
SH3BP2-224ENST00000513020 CPDO75976 1380 aa16.74■□□□□ 0.27
SH3BP2-224ENST00000513020 EDC4Q6P2E9 1401 aaKnown RBP16.73■□□□□ 0.27
SH3BP2-224ENST00000513020 MYOM1P52179 1685 aa16.73■□□□□ 0.27
SH3BP2-224ENST00000513020 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SH3BP2-224ENST00000513020 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
SH3BP2-224ENST00000513020 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
SH3BP2-224ENST00000513020 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
SH3BP2-224ENST00000513020 SOX12O15370 315 aa16.71■□□□□ 0.27
SH3BP2-224ENST00000513020 NME9Q86XW9 330 aa16.71■□□□□ 0.27
SH3BP2-224ENST00000513020 UPF1Q92900 1129 aaKnown RBP eCLIP16.71■□□□□ 0.27
SH3BP2-224ENST00000513020 STRN4Q9NRL3 753 aa16.71■□□□□ 0.27
SH3BP2-224ENST00000513020 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.27
SH3BP2-224ENST00000513020 NFAT5O94916 1531 aa16.7■□□□□ 0.26
SH3BP2-224ENST00000513020 COL18A1P39060 1754 aa16.69■□□□□ 0.26
SH3BP2-224ENST00000513020 ANKRD36BQ8N2N9 1353 aa16.69■□□□□ 0.26
SH3BP2-224ENST00000513020 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
SH3BP2-224ENST00000513020 CDCA8Q53HL2 280 aa16.69■□□□□ 0.26
SH3BP2-224ENST00000513020 COL5A2P05997 1499 aaPredicted RBP16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 FAM98CQ17RN3 349 aaKnown RBP16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 KCNH5Q8NCM2 988 aa16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 LTN1O94822 1766 aa16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
SH3BP2-224ENST00000513020 A0A0G2JS52 829 aa16.67■□□□□ 0.26
SH3BP2-224ENST00000513020 EVA1CP58658 441 aa16.67■□□□□ 0.26
SH3BP2-224ENST00000513020 MYT1Q01538 1121 aa16.67■□□□□ 0.26
SH3BP2-224ENST00000513020 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
SH3BP2-224ENST00000513020 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
SH3BP2-224ENST00000513020 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
SH3BP2-224ENST00000513020 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
SH3BP2-224ENST00000513020 THSD7AQ9UPZ6 1657 aa16.66■□□□□ 0.26
SH3BP2-224ENST00000513020 EP400Q96L91 3159 aa16.65■□□□□ 0.26
SH3BP2-224ENST00000513020 ONECUT3O60422 494 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms