RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TRIM34Q9BYJ4 488 aa7.8□□□□□ -1.16
HTT-210ENST00000512909 FKBPLQ9UIM3 349 aa7.8□□□□□ -1.16
HTT-210ENST00000512909 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
HTT-210ENST00000512909 SOX11P35716 441 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 PTK2Q05397 1052 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 VAC14Q08AM6 782 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 TJAP1Q5JTD0 557 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 CCDC82Q8N4S0 544 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 FAM160A2Q8N612 972 aaPredicted RBP7.79□□□□□ -1.16
HTT-210ENST00000512909 ZNF516Q92618 1163 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 EVA1BQ9NVM1 165 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
HTT-210ENST00000512909 MMP16P51512 607 aa7.78□□□□□ -1.16
HTT-210ENST00000512909 FNBP4Q8N3X1 1017 aaPredicted RBP7.78□□□□□ -1.16
HTT-210ENST00000512909 EPS8L1Q8TE68 723 aa7.78□□□□□ -1.16
HTT-210ENST00000512909 GPKOWQ92917 476 aaPredicted RBP eCLIP7.78□□□□□ -1.16
HTT-210ENST00000512909 PRDM9Q9NQV7 894 aa7.78□□□□□ -1.16
HTT-210ENST00000512909 ZBBXA8MT70 800 aa7.77□□□□□ -1.17
HTT-210ENST00000512909 S1PR4O95977 384 aa7.77□□□□□ -1.17
HTT-210ENST00000512909 GLMNQ92990 594 aa7.77□□□□□ -1.17
HTT-210ENST00000512909 PLA2G2EQ9NZK7 142 aa7.77□□□□□ -1.17
HTT-210ENST00000512909 NR1H3Q13133 447 aa7.76□□□□□ -1.17
HTT-210ENST00000512909 HDGFL1Q5TGJ6 251 aa7.76□□□□□ -1.17
HTT-210ENST00000512909 ZBTB33Q86T24 672 aa7.76□□□□□ -1.17
HTT-210ENST00000512909 F12P00748 615 aaPredicted RBP7.75□□□□□ -1.17
HTT-210ENST00000512909 ARHGAP9Q9BRR9 750 aa7.75□□□□□ -1.17
HTT-210ENST00000512909 FCF1Q9Y324 198 aaKnown RBP7.75□□□□□ -1.17
HTT-210ENST00000512909 IRF5Q13568 498 aa7.74□□□□□ -1.17
HTT-210ENST00000512909 NKX2-3Q8TAU0 364 aa7.74□□□□□ -1.17
HTT-210ENST00000512909 UNC93B1Q9H1C4 597 aa7.74□□□□□ -1.17
HTT-210ENST00000512909 ACIN1Q9UKV3 1341 aaKnown RBP7.74□□□□□ -1.17
HTT-210ENST00000512909 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
HTT-210ENST00000512909 MCCD1P59942 119 aaPredicted RBP7.73□□□□□ -1.17
HTT-210ENST00000512909 PDXDC2PQ6P474 469 aa7.73□□□□□ -1.17
HTT-210ENST00000512909 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
HTT-210ENST00000512909 PCDHB9Q9Y5E1 797 aa7.73□□□□□ -1.17
HTT-210ENST00000512909 MAGEB6P1A0A0J9YX57 407 aa7.72□□□□□ -1.17
HTT-210ENST00000512909 BPHLQ86WA6 291 aaPredicted RBP7.72□□□□□ -1.17
HTT-210ENST00000512909 DZIP3Q86Y13 1208 aaKnown RBP7.72□□□□□ -1.17
HTT-210ENST00000512909 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
HTT-210ENST00000512909 CARD14Q9BXL6 1004 aa7.71□□□□□ -1.18
HTT-210ENST00000512909 C1orf115Q9H7X2 142 aa7.71□□□□□ -1.18
HTT-210ENST00000512909 FBXO45P0C2W1 286 aa7.7□□□□□ -1.18
HTT-210ENST00000512909 SLFNL1Q499Z3 407 aa7.7□□□□□ -1.18
HTT-210ENST00000512909 ITGBL1O95965 494 aaPredicted RBP7.69□□□□□ -1.18
HTT-210ENST00000512909 RFX1P22670 979 aa7.69□□□□□ -1.18
HTT-210ENST00000512909 BAP1Q92560 729 aa7.69□□□□□ -1.18
HTT-210ENST00000512909 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.69□□□□□ -1.18
HTT-210ENST00000512909 PPEF1O14829 653 aaPredicted RBP7.68□□□□□ -1.18
HTT-210ENST00000512909 CD2BP2O95400 341 aaKnown RBP7.68□□□□□ -1.18
HTT-210ENST00000512909 ANKLE1Q8NAG6 615 aa7.68□□□□□ -1.18
HTT-210ENST00000512909 SLC10A4Q96EP9 437 aa7.68□□□□□ -1.18
HTT-210ENST00000512909 PDE4CQ08493 712 aa7.67□□□□□ -1.18
HTT-210ENST00000512909 TRIM52Q96A61 297 aa7.67□□□□□ -1.18
HTT-210ENST00000512909 ESF1Q9H501 851 aaKnown RBP7.67□□□□□ -1.18
HTT-210ENST00000512909 PTCRAQ6ISU1 281 aaPredicted RBP7.66□□□□□ -1.18
HTT-210ENST00000512909 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
HTT-210ENST00000512909 ADAM32Q8TC27 787 aa7.66□□□□□ -1.18
HTT-210ENST00000512909 RNF223E7ERA6 249 aa7.65□□□□□ -1.18
HTT-210ENST00000512909 PPP1R15AO75807 674 aaPredicted RBP7.65□□□□□ -1.18
HTT-210ENST00000512909 SKIP12755 728 aa7.65□□□□□ -1.18
HTT-210ENST00000512909 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.18
HTT-210ENST00000512909 PPP1R18Q6NYC8 613 aa7.65□□□□□ -1.18
HTT-210ENST00000512909 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
HTT-210ENST00000512909 ALG2Q9H553 416 aa7.65□□□□□ -1.18
HTT-210ENST00000512909 CDV3Q9UKY7 258 aaKnown RBP7.65□□□□□ -1.18
HTT-210ENST00000512909 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
HTT-210ENST00000512909 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
HTT-210ENST00000512909 FAM174AQ8TBP5 190 aa7.64□□□□□ -1.19
HTT-210ENST00000512909 PPP1R12CQ9BZL4 782 aa7.64□□□□□ -1.19
HTT-210ENST00000512909 TFIP11Q9UBB9 837 aaKnown RBP7.64□□□□□ -1.19
HTT-210ENST00000512909 RPIAP49247 311 aa7.63□□□□□ -1.19
HTT-210ENST00000512909 TRIM32Q13049 653 aa7.63□□□□□ -1.19
HTT-210ENST00000512909 NBPF20Q3BBV1 942 aa7.63□□□□□ -1.19
HTT-210ENST00000512909 EHBP1Q8NDI1 1231 aa7.63□□□□□ -1.19
HTT-210ENST00000512909 PALM3A6NDB9 673 aaPredicted RBP7.62□□□□□ -1.19
HTT-210ENST00000512909 GPR37L1O60883 481 aa7.62□□□□□ -1.19
HTT-210ENST00000512909 ARID5BQ14865 1188 aa7.62□□□□□ -1.19
HTT-210ENST00000512909 SH3BP5LQ7L8J4 393 aa7.62□□□□□ -1.19
HTT-210ENST00000512909 FOXJ1Q92949 421 aa7.62□□□□□ -1.19
HTT-210ENST00000512909 PBXIP1Q96AQ6 731 aa7.62□□□□□ -1.19
HTT-210ENST00000512909 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
HTT-210ENST00000512909 ATP9BO43861 1147 aa7.61□□□□□ -1.19
HTT-210ENST00000512909 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
HTT-210ENST00000512909 VARSP26640 1264 aaKnown RBP7.61□□□□□ -1.19
HTT-210ENST00000512909 WNT7BP56706 349 aa7.61□□□□□ -1.19
HTT-210ENST00000512909 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
HTT-210ENST00000512909 RAB15P59190 212 aa7.6□□□□□ -1.19
HTT-210ENST00000512909 SH3BP2P78314 561 aa7.6□□□□□ -1.19
HTT-210ENST00000512909 ADAMTS19Q8TE59 1207 aa7.6□□□□□ -1.19
HTT-210ENST00000512909 VRTNQ9H8Y1 702 aa7.6□□□□□ -1.19
HTT-210ENST00000512909 EML3Q32P44 896 aa7.59□□□□□ -1.19
HTT-210ENST00000512909 ERFEQ4G0M1 354 aa7.59□□□□□ -1.19
HTT-210ENST00000512909 VASH1Q7L8A9 365 aaPredicted RBP7.59□□□□□ -1.19
HTT-210ENST00000512909 CCDC125Q86Z20 511 aa7.59□□□□□ -1.19
HTT-210ENST00000512909 NFATC2IPQ8NCF5 419 aa7.59□□□□□ -1.19
HTT-210ENST00000512909 SIRT1Q96EB6 747 aa7.59□□□□□ -1.19
HTT-210ENST00000512909 DOLKQ9UPQ8 538 aa7.59□□□□□ -1.19
HTT-210ENST00000512909 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
HTT-210ENST00000512909 SLC19A1P41440 591 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms