RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
PFDN1-204ENST00000512707 SLAIN2Q9P270 581 aa14.8□□□□□ -0.04
PFDN1-204ENST00000512707 POLR3AO14802 1390 aaPredicted RBP14.8□□□□□ -0.04
PFDN1-204ENST00000512707 ROBO1Q9Y6N7 1651 aa14.8□□□□□ -0.04
PFDN1-204ENST00000512707 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
PFDN1-204ENST00000512707 NSD2O96028 1365 aa14.79□□□□□ -0.04
PFDN1-204ENST00000512707 CD163L1Q9NR16 1453 aa14.79□□□□□ -0.04
PFDN1-204ENST00000512707 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
PFDN1-204ENST00000512707 PER1O15534 1290 aaPredicted RBP14.78□□□□□ -0.04
PFDN1-204ENST00000512707 PSME1Q06323 249 aa14.78□□□□□ -0.04
PFDN1-204ENST00000512707 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
PFDN1-204ENST00000512707 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
PFDN1-204ENST00000512707 AKAP12Q02952 1782 aa14.78□□□□□ -0.04
PFDN1-204ENST00000512707 USP6P35125 1406 aa14.77□□□□□ -0.04
PFDN1-204ENST00000512707 ORAI2Q96SN7 254 aa14.77□□□□□ -0.05
PFDN1-204ENST00000512707 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.05
PFDN1-204ENST00000512707 NPHP3Q7Z494 1330 aa14.76□□□□□ -0.05
PFDN1-204ENST00000512707 RALBP1Q15311 655 aa14.76□□□□□ -0.05
PFDN1-204ENST00000512707 TTC21AQ8NDW8 1320 aa14.75□□□□□ -0.05
PFDN1-204ENST00000512707 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
PFDN1-204ENST00000512707 CC2D1BQ5T0F9 858 aaKnown RBP14.75□□□□□ -0.05
PFDN1-204ENST00000512707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.051e-6■■□□□ 12
PFDN1-204ENST00000512707 FOXO3O43524 673 aa14.74□□□□□ -0.05
PFDN1-204ENST00000512707 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
PFDN1-204ENST00000512707 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
PFDN1-204ENST00000512707 BRINP3Q76B58 766 aa14.73□□□□□ -0.05
PFDN1-204ENST00000512707 PRKRIP1Q9H875 184 aaPredicted RBP14.73□□□□□ -0.05
PFDN1-204ENST00000512707 TTC21BQ7Z4L5 1316 aa14.72□□□□□ -0.05
PFDN1-204ENST00000512707 MORC1Q86VD1 984 aa14.72□□□□□ -0.05
PFDN1-204ENST00000512707 NRKQ7Z2Y5 1582 aa14.72□□□□□ -0.05
PFDN1-204ENST00000512707 PHLPP1O60346 1717 aa14.72□□□□□ -0.05
PFDN1-204ENST00000512707 KIF20BQ96Q89 1820 aa14.71□□□□□ -0.05
PFDN1-204ENST00000512707 KRT28Q7Z3Y7 464 aa14.71□□□□□ -0.05
PFDN1-204ENST00000512707 COG3Q96JB2 828 aa14.71□□□□□ -0.05
PFDN1-204ENST00000512707 FYB1O15117 783 aa14.7□□□□□ -0.06
PFDN1-204ENST00000512707 POTEAQ6S8J7 498 aa14.7□□□□□ -0.06
PFDN1-204ENST00000512707 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
PFDN1-204ENST00000512707 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
PFDN1-204ENST00000512707 MIER1Q8N108 512 aa14.69□□□□□ -0.06
PFDN1-204ENST00000512707 GGNBP2Q9H3C7 697 aa14.69□□□□□ -0.06
PFDN1-204ENST00000512707 MYBBP1AQ9BQG0 1328 aaKnown RBP14.68□□□□□ -0.06
PFDN1-204ENST00000512707 NME9Q86XW9 330 aa14.68□□□□□ -0.06
PFDN1-204ENST00000512707 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
PFDN1-204ENST00000512707 ANKRD26Q9UPS8 1709 aa14.68□□□□□ -0.06
PFDN1-204ENST00000512707 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
PFDN1-204ENST00000512707 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
PFDN1-204ENST00000512707 XPCQ01831 940 aaPredicted RBP14.67□□□□□ -0.06
PFDN1-204ENST00000512707 LMOD2Q6P5Q4 547 aa14.67□□□□□ -0.06
PFDN1-204ENST00000512707 ARHGEF10O15013 1369 aa14.66□□□□□ -0.06
PFDN1-204ENST00000512707 CCER2I3L3R5 266 aa14.66□□□□□ -0.06
PFDN1-204ENST00000512707 NLRP6P59044 892 aa14.66□□□□□ -0.06
PFDN1-204ENST00000512707 NLRP13Q86W25 1043 aa14.66□□□□□ -0.06
PFDN1-204ENST00000512707 PXDNQ92626 1479 aa14.65□□□□□ -0.06
PFDN1-204ENST00000512707 USP31Q70CQ4 1352 aa14.65□□□□□ -0.06
PFDN1-204ENST00000512707 JCADQ9P266 1359 aa14.65□□□□□ -0.06
PFDN1-204ENST00000512707 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
PFDN1-204ENST00000512707 NHSL1Q5SYE7 1610 aa14.64□□□□□ -0.07
PFDN1-204ENST00000512707 TNNT2P45379 298 aaPredicted RBP14.64□□□□□ -0.07
PFDN1-204ENST00000512707 OVOS2A0A0J9YW53 1432 aa14.64□□□□□ -0.07
PFDN1-204ENST00000512707 OVOS2Q6IE36 1432 aa14.64□□□□□ -0.07
PFDN1-204ENST00000512707 PIK3C2AO00443 1686 aa14.64□□□□□ -0.07
PFDN1-204ENST00000512707 SOS2Q07890 1332 aaPredicted RBP14.64□□□□□ -0.07
PFDN1-204ENST00000512707 TRPM3Q9HCF6 1732 aaPredicted RBP14.63□□□□□ -0.07
PFDN1-204ENST00000512707 AHDC1Q5TGY3 1603 aaPredicted RBP14.63□□□□□ -0.07
PFDN1-204ENST00000512707 DDX17Q92841 729 aaKnown RBP14.63□□□□□ -0.07
PFDN1-204ENST00000512707 PPP2R1AP30153 589 aa14.62□□□□□ -0.07
PFDN1-204ENST00000512707 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
PFDN1-204ENST00000512707 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
PFDN1-204ENST00000512707 SPATA31A3Q5VYP0 1347 aa14.62□□□□□ -0.07
PFDN1-204ENST00000512707 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
PFDN1-204ENST00000512707 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
PFDN1-204ENST00000512707 NUTM2GQ5VZR2 741 aa14.61□□□□□ -0.07
PFDN1-204ENST00000512707 LRRC59Q96AG4 307 aaKnown RBP14.61□□□□□ -0.07
PFDN1-204ENST00000512707 AATKQ6ZMQ8 1374 aa14.6□□□□□ -0.07
PFDN1-204ENST00000512707 MRS2Q9HD23 443 aa14.6□□□□□ -0.07
PFDN1-204ENST00000512707 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
PFDN1-204ENST00000512707 ALS2Q96Q42 1657 aa14.6□□□□□ -0.07
PFDN1-204ENST00000512707 LRP6O75581 1613 aa14.59□□□□□ -0.07
PFDN1-204ENST00000512707 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
PFDN1-204ENST00000512707 SOX12O15370 315 aa14.57□□□□□ -0.08
PFDN1-204ENST00000512707 USP19O94966 1318 aa14.57□□□□□ -0.08
PFDN1-204ENST00000512707 SPATA31A6Q5VVP1 1343 aa14.57□□□□□ -0.08
PFDN1-204ENST00000512707 PPM1GO15355 546 aaPredicted RBP14.56□□□□□ -0.08
PFDN1-204ENST00000512707 MTHFSP49914 203 aa14.56□□□□□ -0.08
PFDN1-204ENST00000512707 SLIT3O75094 1523 aa14.56□□□□□ -0.08
PFDN1-204ENST00000512707 PLEKHG5O94827 1062 aa14.55□□□□□ -0.08
PFDN1-204ENST00000512707 GCP02774 474 aa14.55□□□□□ -0.08
PFDN1-204ENST00000512707 KIF24Q5T7B8 1368 aa14.55□□□□□ -0.08
PFDN1-204ENST00000512707 AMPHP49418 695 aa14.54□□□□□ -0.08
PFDN1-204ENST00000512707 POLKQ9UBT6 870 aa14.54□□□□□ -0.08
PFDN1-204ENST00000512707 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
PFDN1-204ENST00000512707 CDK12Q9NYV4 1490 aaPredicted RBP14.54□□□□□ -0.08
PFDN1-204ENST00000512707 RTL1A6NKG5 1358 aa14.53□□□□□ -0.08
PFDN1-204ENST00000512707 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
PFDN1-204ENST00000512707 WDR43Q15061 677 aaKnown RBP eCLIP14.53□□□□□ -0.08
PFDN1-204ENST00000512707 NUDCQ9Y266 331 aa14.53□□□□□ -0.08
PFDN1-204ENST00000512707 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.08
PFDN1-204ENST00000512707 FLT4P35916 1363 aa14.52□□□□□ -0.08
PFDN1-204ENST00000512707 ZNF772Q68DY9 489 aaPredicted RBP14.52□□□□□ -0.09
PFDN1-204ENST00000512707 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms