RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
CDK7-208ENST00000512687 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
CDK7-208ENST00000512687 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
CDK7-208ENST00000512687 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
CDK7-208ENST00000512687 LMOD2Q6P5Q4 547 aa17.35■□□□□ 0.37
CDK7-208ENST00000512687 CDK19Q9BWU1 502 aa17.35■□□□□ 0.37
CDK7-208ENST00000512687 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
CDK7-208ENST00000512687 UPF1Q92900 1129 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDK7-208ENST00000512687 CENPJQ9HC77 1338 aaPredicted RBP17.34■□□□□ 0.37
CDK7-208ENST00000512687 AKAP12Q02952 1782 aa17.33■□□□□ 0.36
CDK7-208ENST00000512687 RALGAPBQ86X10 1494 aa17.32■□□□□ 0.36
CDK7-208ENST00000512687 POLR3AO14802 1390 aaPredicted RBP17.32■□□□□ 0.36
CDK7-208ENST00000512687 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
CDK7-208ENST00000512687 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
CDK7-208ENST00000512687 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
CDK7-208ENST00000512687 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
CDK7-208ENST00000512687 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
CDK7-208ENST00000512687 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
CDK7-208ENST00000512687 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
CDK7-208ENST00000512687 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
CDK7-208ENST00000512687 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
CDK7-208ENST00000512687 ACEP12821 1306 aa17.29■□□□□ 0.36
CDK7-208ENST00000512687 EP400Q96L91 3159 aa17.29■□□□□ 0.36
CDK7-208ENST00000512687 PIK3C2AO00443 1686 aa17.27■□□□□ 0.36
CDK7-208ENST00000512687 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CDK7-208ENST00000512687 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
CDK7-208ENST00000512687 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
CDK7-208ENST00000512687 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
CDK7-208ENST00000512687 PLEKHG3A1L390 1219 aa17.26■□□□□ 0.35
CDK7-208ENST00000512687 FAM83GA6ND36 823 aa17.26■□□□□ 0.35
CDK7-208ENST00000512687 ZBTB22O15209 634 aa17.26■□□□□ 0.35
CDK7-208ENST00000512687 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
CDK7-208ENST00000512687 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
CDK7-208ENST00000512687 LMO7Q8WWI1 1683 aa17.24■□□□□ 0.35
CDK7-208ENST00000512687 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
CDK7-208ENST00000512687 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
CDK7-208ENST00000512687 VPS72Q15906 364 aa17.22■□□□□ 0.35
CDK7-208ENST00000512687 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
CDK7-208ENST00000512687 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
CDK7-208ENST00000512687 USP6P35125 1406 aa17.21■□□□□ 0.34
CDK7-208ENST00000512687 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
CDK7-208ENST00000512687 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
CDK7-208ENST00000512687 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
CDK7-208ENST00000512687 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
CDK7-208ENST00000512687 SLIT3O75094 1523 aa17.19■□□□□ 0.34
CDK7-208ENST00000512687 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
CDK7-208ENST00000512687 USP19O94966 1318 aa17.19■□□□□ 0.34
CDK7-208ENST00000512687 COL18A1P39060 1754 aa17.18■□□□□ 0.34
CDK7-208ENST00000512687 CABP1Q9NZU7 370 aa17.18■□□□□ 0.34
CDK7-208ENST00000512687 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
CDK7-208ENST00000512687 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
CDK7-208ENST00000512687 PRDM11Q9NQV5 511 aa17.17■□□□□ 0.34
CDK7-208ENST00000512687 CCDC9Q9Y3X0 531 aaKnown RBP17.17■□□□□ 0.34
CDK7-208ENST00000512687 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
CDK7-208ENST00000512687 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
CDK7-208ENST00000512687 ZC3H6P61129 1189 aaKnown RBP17.16■□□□□ 0.34
CDK7-208ENST00000512687 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
CDK7-208ENST00000512687 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
CDK7-208ENST00000512687 WNK3Q9BYP7 1800 aa17.16■□□□□ 0.34
CDK7-208ENST00000512687 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
CDK7-208ENST00000512687 SEPT12Q8IYM1 358 aa17.15■□□□□ 0.34
CDK7-208ENST00000512687 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
CDK7-208ENST00000512687 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
CDK7-208ENST00000512687 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
CDK7-208ENST00000512687 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
CDK7-208ENST00000512687 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
CDK7-208ENST00000512687 CPDO75976 1380 aa17.13■□□□□ 0.33
CDK7-208ENST00000512687 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
CDK7-208ENST00000512687 TNS1Q9HBL0 1735 aaKnown RBP17.13■□□□□ 0.33
CDK7-208ENST00000512687 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
CDK7-208ENST00000512687 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
CDK7-208ENST00000512687 LTN1O94822 1766 aa17.12■□□□□ 0.33
CDK7-208ENST00000512687 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
CDK7-208ENST00000512687 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
CDK7-208ENST00000512687 GCP02774 474 aa17.09■□□□□ 0.33
CDK7-208ENST00000512687 COL5A2P05997 1499 aaPredicted RBP17.09■□□□□ 0.33
CDK7-208ENST00000512687 NFAT5O94916 1531 aa17.09■□□□□ 0.33
CDK7-208ENST00000512687 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
CDK7-208ENST00000512687 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
CDK7-208ENST00000512687 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.32
CDK7-208ENST00000512687 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
CDK7-208ENST00000512687 STRN4Q9NRL3 753 aa17.08■□□□□ 0.32
CDK7-208ENST00000512687 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
CDK7-208ENST00000512687 A0A0G2JS52 829 aa17.07■□□□□ 0.32
CDK7-208ENST00000512687 NLRP6P59044 892 aa17.07■□□□□ 0.32
CDK7-208ENST00000512687 MYT1Q01538 1121 aa17.07■□□□□ 0.32
CDK7-208ENST00000512687 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
CDK7-208ENST00000512687 TESK2Q96S53 571 aa17.05■□□□□ 0.32
CDK7-208ENST00000512687 LRRC37A3O60309 1634 aa17.05■□□□□ 0.32
CDK7-208ENST00000512687 MYOM1P52179 1685 aa17.04■□□□□ 0.32
CDK7-208ENST00000512687 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
CDK7-208ENST00000512687 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
CDK7-208ENST00000512687 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
CDK7-208ENST00000512687 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
CDK7-208ENST00000512687 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
CDK7-208ENST00000512687 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
CDK7-208ENST00000512687 CCDC125Q86Z20 511 aa17.03■□□□□ 0.32
CDK7-208ENST00000512687 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.32
CDK7-208ENST00000512687 ZBTB7CA1YPR0 619 aa17.02■□□□□ 0.32
CDK7-208ENST00000512687 USP35Q9P2H5 1018 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms