RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 DDX10Q13206 875 aaKnown RBP29.24■■■□□ 2.27
CSNK1G3-206ENST00000511130 COL16A1Q07092 1604 aaPredicted RBP29.23■■■□□ 2.27
CSNK1G3-206ENST00000511130 TTC21BQ7Z4L5 1316 aa29.22■■■□□ 2.27
CSNK1G3-206ENST00000511130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.22■■■□□ 2.27
CSNK1G3-206ENST00000511130 SBNO1A3KN83 1393 aa29.21■■■□□ 2.27
CSNK1G3-206ENST00000511130 NRKQ7Z2Y5 1582 aa29.21■■■□□ 2.27
CSNK1G3-206ENST00000511130 EDC4Q6P2E9 1401 aaKnown RBP29.2■■■□□ 2.27
CSNK1G3-206ENST00000511130 NSD3Q9BZ95 1437 aa29.2■■■□□ 2.27
CSNK1G3-206ENST00000511130 SPATA31A3Q5VYP0 1347 aa29.2■■■□□ 2.26
CSNK1G3-206ENST00000511130 LMOD2Q6P5Q4 547 aa29.18■■■□□ 2.26
CSNK1G3-206ENST00000511130 LRRC59Q96AG4 307 aaKnown RBP29.17■■■□□ 2.26
CSNK1G3-206ENST00000511130 ZRANB1Q9UGI0 708 aa29.17■■■□□ 2.26
CSNK1G3-206ENST00000511130 TNS3Q68CZ2 1445 aa29.17■■■□□ 2.26
CSNK1G3-206ENST00000511130 BRD4O60885 1362 aaPredicted RBP29.17■■■□□ 2.26
CSNK1G3-206ENST00000511130 NUTM2GQ5VZR2 741 aa29.16■■■□□ 2.26
CSNK1G3-206ENST00000511130 NME9Q86XW9 330 aa29.16■■■□□ 2.26
CSNK1G3-206ENST00000511130 PER1O15534 1290 aaPredicted RBP29.15■■■□□ 2.26
CSNK1G3-206ENST00000511130 TTC21AQ8NDW8 1320 aa29.14■■■□□ 2.26
CSNK1G3-206ENST00000511130 ALS2Q96Q42 1657 aa29.14■■■□□ 2.25
CSNK1G3-206ENST00000511130 PLEKHG5O94827 1062 aa29.13■■■□□ 2.25
CSNK1G3-206ENST00000511130 ABTB2Q8N961 1025 aa29.13■■■□□ 2.25
CSNK1G3-206ENST00000511130 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
CSNK1G3-206ENST00000511130 FYB1O15117 783 aa29.11■■■□□ 2.25
CSNK1G3-206ENST00000511130 PNPLA6Q8IY17 1366 aa29.11■■■□□ 2.25
CSNK1G3-206ENST00000511130 KNSTRNQ9Y448 316 aa29.1■■■□□ 2.25
CSNK1G3-206ENST00000511130 GGNBP2Q9H3C7 697 aa29.09■■■□□ 2.25
CSNK1G3-206ENST00000511130 ARHGEF10O15013 1369 aa29.08■■■□□ 2.25
CSNK1G3-206ENST00000511130 NLRP6P59044 892 aa29.08■■■□□ 2.25
CSNK1G3-206ENST00000511130 CGNL1Q0VF96 1302 aa29.06■■■□□ 2.24
CSNK1G3-206ENST00000511130 AMER1Q5JTC6 1135 aaPredicted RBP29.06■■■□□ 2.24
CSNK1G3-206ENST00000511130 CABLES1Q8TDN4 633 aa29.06■■■□□ 2.24
CSNK1G3-206ENST00000511130 JCADQ9P266 1359 aa29.05■■■□□ 2.24
CSNK1G3-206ENST00000511130 ILDR1Q86SU0 546 aaPredicted RBP29.05■■■□□ 2.24
CSNK1G3-206ENST00000511130 USP31Q70CQ4 1352 aa29.05■■■□□ 2.24
CSNK1G3-206ENST00000511130 CNGB1Q14028 1251 aaPredicted RBP29.04■■■□□ 2.24
CSNK1G3-206ENST00000511130 NLRP13Q86W25 1043 aa29.03■■■□□ 2.24
CSNK1G3-206ENST00000511130 KIF20BQ96Q89 1820 aa29.03■■■□□ 2.24
CSNK1G3-206ENST00000511130 MED1Q15648 1581 aaPredicted RBP29.03■■■□□ 2.24
CSNK1G3-206ENST00000511130 MARF1Q9Y4F3 1742 aaKnown RBP29.03■■■□□ 2.24
CSNK1G3-206ENST00000511130 SHPRHQ149N8 1683 aa29.01■■■□□ 2.23
CSNK1G3-206ENST00000511130 COL22A1Q8NFW1 1626 aaPredicted RBP29.01■■■□□ 2.23
CSNK1G3-206ENST00000511130 OVOS2A0A0J9YW53 1432 aa29.01■■■□□ 2.23
CSNK1G3-206ENST00000511130 OVOS2Q6IE36 1432 aa29.01■■■□□ 2.23
CSNK1G3-206ENST00000511130 USP19O94966 1318 aa29■■■□□ 2.23
CSNK1G3-206ENST00000511130 CC2D1BQ5T0F9 858 aaKnown RBP29■■■□□ 2.23
CSNK1G3-206ENST00000511130 COG3Q96JB2 828 aa29■■■□□ 2.23
CSNK1G3-206ENST00000511130 NUTM2BA6NNL0 878 aaPredicted RBP28.97■■■□□ 2.23
CSNK1G3-206ENST00000511130 NUTM2EB1AL46 878 aaPredicted RBP28.97■■■□□ 2.23
CSNK1G3-206ENST00000511130 SOX12O15370 315 aa28.97■■■□□ 2.23
CSNK1G3-206ENST00000511130 NUTM2AQ8IVF1 878 aaPredicted RBP28.97■■■□□ 2.23
CSNK1G3-206ENST00000511130 CRYBG1Q9Y4K1 1723 aa28.96■■■□□ 2.23
CSNK1G3-206ENST00000511130 USP54Q70EL1 1684 aa28.96■■■□□ 2.23
CSNK1G3-206ENST00000511130 FBLN1P23142 703 aa28.96■■■□□ 2.23
CSNK1G3-206ENST00000511130 SLIT3O75094 1523 aa28.95■■■□□ 2.22
CSNK1G3-206ENST00000511130 NSD2O96028 1365 aa28.94■■■□□ 2.22
CSNK1G3-206ENST00000511130 GCP02774 474 aa28.94■■■□□ 2.22
CSNK1G3-206ENST00000511130 ABCA3Q99758 1704 aa28.94■■■□□ 2.22
CSNK1G3-206ENST00000511130 PHRF1Q9P1Y6 1649 aaKnown RBP28.93■■■□□ 2.22
CSNK1G3-206ENST00000511130 NPC1L1Q9UHC9 1359 aa28.93■■■□□ 2.22
CSNK1G3-206ENST00000511130 MORC1Q86VD1 984 aa28.92■■■□□ 2.22
CSNK1G3-206ENST00000511130 ANKRD26Q9UPS8 1709 aa28.92■■■□□ 2.22
CSNK1G3-206ENST00000511130 TNNT2P45379 298 aaPredicted RBP28.91■■■□□ 2.22
CSNK1G3-206ENST00000511130 HAP1P54257 671 aaPredicted RBP28.91■■■□□ 2.22
CSNK1G3-206ENST00000511130 SPATA31A6Q5VVP1 1343 aa28.91■■■□□ 2.22
CSNK1G3-206ENST00000511130 ZC3H6P61129 1189 aaKnown RBP28.89■■■□□ 2.22
CSNK1G3-206ENST00000511130 LRP6O75581 1613 aa28.89■■■□□ 2.22
CSNK1G3-206ENST00000511130 NFAT5O94916 1531 aa28.88■■■□□ 2.21
CSNK1G3-206ENST00000511130 ADAMTS2O95450 1211 aa28.88■■■□□ 2.21
CSNK1G3-206ENST00000511130 KCNH5Q8NCM2 988 aa28.88■■■□□ 2.21
CSNK1G3-206ENST00000511130 ZBTB7CA1YPR0 619 aa28.85■■■□□ 2.21
CSNK1G3-206ENST00000511130 KIAA0232Q92628 1395 aa28.84■■■□□ 2.21
CSNK1G3-206ENST00000511130 RRS1Q15050 365 aaKnown RBP28.83■■■□□ 2.21
CSNK1G3-206ENST00000511130 CHRNA2Q15822 529 aa28.82■■■□□ 2.2
CSNK1G3-206ENST00000511130 ARHGEF25Q86VW2 580 aa28.82■■■□□ 2.2
CSNK1G3-206ENST00000511130 FAM83GA6ND36 823 aa28.81■■■□□ 2.2
CSNK1G3-206ENST00000511130 MAP3K19Q56UN5 1328 aa28.8■■■□□ 2.2
CSNK1G3-206ENST00000511130 CPDO75976 1380 aa28.8■■■□□ 2.2
CSNK1G3-206ENST00000511130 PARD3Q8TEW0 1356 aa28.8■■■□□ 2.2
CSNK1G3-206ENST00000511130 AATKQ6ZMQ8 1374 aa28.79■■■□□ 2.2
CSNK1G3-206ENST00000511130 PRDM11Q9NQV5 511 aa28.78■■■□□ 2.2
CSNK1G3-206ENST00000511130 EMILIN1Q9Y6C2 1016 aa28.78■■■□□ 2.2
CSNK1G3-206ENST00000511130 POLKQ9UBT6 870 aa28.77■■■□□ 2.2
CSNK1G3-206ENST00000511130 PRKRIP1Q9H875 184 aaPredicted RBP28.76■■■□□ 2.2
CSNK1G3-206ENST00000511130 MEX3CQ5U5Q3 659 aaKnown RBP28.75■■■□□ 2.19
CSNK1G3-206ENST00000511130 C8orf37Q96NL8 207 aa28.75■■■□□ 2.19
CSNK1G3-206ENST00000511130 LTN1O94822 1766 aa28.75■■■□□ 2.19
CSNK1G3-206ENST00000511130 DIEXFQ68CQ4 756 aaKnown RBP28.75■■■□□ 2.19
CSNK1G3-206ENST00000511130 MAP2P11137 1827 aaKnown RBP28.74■■■□□ 2.19
CSNK1G3-206ENST00000511130 PPP2R1AP30153 589 aa28.74■■■□□ 2.19
CSNK1G3-206ENST00000511130 RALBP1Q15311 655 aa28.74■■■□□ 2.19
CSNK1G3-206ENST00000511130 PPM1GO15355 546 aaPredicted RBP28.73■■■□□ 2.19
CSNK1G3-206ENST00000511130 AXIN2Q9Y2T1 843 aa28.73■■■□□ 2.19
CSNK1G3-206ENST00000511130 PEAK1Q9H792 1746 aa28.72■■■□□ 2.19
CSNK1G3-206ENST00000511130 COL18A1P39060 1754 aa28.72■■■□□ 2.19
CSNK1G3-206ENST00000511130 AMPHP49418 695 aa28.72■■■□□ 2.19
CSNK1G3-206ENST00000511130 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
CSNK1G3-206ENST00000511130 ANP32CO43423 234 aa28.7■■■□□ 2.18
CSNK1G3-206ENST00000511130 HOXC9P31274 260 aa28.7■■■□□ 2.18
CSNK1G3-206ENST00000511130 MTHFSP49914 203 aa28.7■■■□□ 2.18
CSNK1G3-206ENST00000511130 COL14A1Q05707 1796 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms