RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
UBE2D3-230ENST00000510599 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
UBE2D3-230ENST00000510599 RSBN1LQ6PCB5 846 aaPredicted RBP8.99□□□□□ -0.97
UBE2D3-230ENST00000510599 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
UBE2D3-230ENST00000510599 CTHP32929 405 aa8.98□□□□□ -0.97
UBE2D3-230ENST00000510599 NNTQ13423 1086 aa8.98□□□□□ -0.97
UBE2D3-230ENST00000510599 NPAS3Q8IXF0 933 aa8.98□□□□□ -0.97
UBE2D3-230ENST00000510599 PARP9Q8IXQ6 854 aa8.98□□□□□ -0.97
UBE2D3-230ENST00000510599 LYPD8Q6UX82 237 aa8.97□□□□□ -0.97
UBE2D3-230ENST00000510599 ZBTB3Q9H5J0 574 aa8.97□□□□□ -0.97
UBE2D3-230ENST00000510599 FAM174AQ8TBP5 190 aa8.96□□□□□ -0.98
UBE2D3-230ENST00000510599 IRF7Q92985 503 aa8.96□□□□□ -0.98
UBE2D3-230ENST00000510599 SPTLC1O15269 473 aa8.95□□□□□ -0.98
UBE2D3-230ENST00000510599 ADH1CP00326 375 aa8.95□□□□□ -0.98
UBE2D3-230ENST00000510599 PRPF38BQ5VTL8 546 aaKnown RBP8.95□□□□□ -0.98
UBE2D3-230ENST00000510599 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
UBE2D3-230ENST00000510599 HRCP23327 699 aa8.94□□□□□ -0.98
UBE2D3-230ENST00000510599 SCARF1Q14162 830 aa8.94□□□□□ -0.98
UBE2D3-230ENST00000510599 ZFP42Q96MM3 310 aa8.94□□□□□ -0.98
UBE2D3-230ENST00000510599 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
UBE2D3-230ENST00000510599 FAM181BA6NEQ2 426 aa8.93□□□□□ -0.98
UBE2D3-230ENST00000510599 TRIM66O15016 1216 aa8.93□□□□□ -0.98
UBE2D3-230ENST00000510599 WDR4P57081 412 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-230ENST00000510599 MRPL14Q6P1L8 145 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-230ENST00000510599 F12P00748 615 aaPredicted RBP8.92□□□□□ -0.98
UBE2D3-230ENST00000510599 TIMP2P16035 220 aa8.92□□□□□ -0.98
UBE2D3-230ENST00000510599 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
UBE2D3-230ENST00000510599 AK7Q96M32 723 aa8.92□□□□□ -0.98
UBE2D3-230ENST00000510599 MAP10Q9P2G4 905 aa8.92□□□□□ -0.98
UBE2D3-230ENST00000510599 CDK15Q96Q40 435 aa8.91□□□□□ -0.98
UBE2D3-230ENST00000510599 H3BM21 787 aa8.9□□□□□ -0.98
UBE2D3-230ENST00000510599 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
UBE2D3-230ENST00000510599 AGERQ15109 404 aa8.9□□□□□ -0.98
UBE2D3-230ENST00000510599 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
UBE2D3-230ENST00000510599 FOXJ1Q92949 421 aa8.9□□□□□ -0.98
UBE2D3-230ENST00000510599 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.98
UBE2D3-230ENST00000510599 GMPRP36959 345 aa8.89□□□□□ -0.99
UBE2D3-230ENST00000510599 VEGFBP49765 207 aa8.89□□□□□ -0.99
UBE2D3-230ENST00000510599 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-230ENST00000510599 CABLES1Q8TDN4 633 aa8.89□□□□□ -0.99
UBE2D3-230ENST00000510599 TSC1Q92574 1164 aa8.89□□□□□ -0.99
UBE2D3-230ENST00000510599 NR5A1Q13285 461 aa8.88□□□□□ -0.99
UBE2D3-230ENST00000510599 NUTM2BA6NNL0 878 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 NUTM2EB1AL46 878 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 NUTM2DQ5VT03 806 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 NUTM2AQ8IVF1 878 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 ARMC2Q8NEN0 867 aa8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
UBE2D3-230ENST00000510599 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
UBE2D3-230ENST00000510599 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-230ENST00000510599 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
UBE2D3-230ENST00000510599 MYSM1Q5VVJ2 828 aa8.85□□□□□ -0.99
UBE2D3-230ENST00000510599 HELBQ8NG08 1087 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-230ENST00000510599 PDE4DQ08499 809 aa8.84□□□□□ -0.99
UBE2D3-230ENST00000510599 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
UBE2D3-230ENST00000510599 ITPKCQ96DU7 683 aa8.84□□□□□ -0.99
UBE2D3-230ENST00000510599 ZFAND3Q9H8U3 227 aa8.84□□□□□ -0.99
UBE2D3-230ENST00000510599 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
UBE2D3-230ENST00000510599 ERBB4Q15303 1308 aa8.83□□□□□ -1
UBE2D3-230ENST00000510599 UPP2O95045 317 aa8.83□□□□□ -1
UBE2D3-230ENST00000510599 QPCTQ16769 361 aa8.83□□□□□ -1
UBE2D3-230ENST00000510599 MAN1A2O60476 641 aa8.82□□□□□ -1
UBE2D3-230ENST00000510599 LILRB3O75022 631 aa8.82□□□□□ -1
UBE2D3-230ENST00000510599 NR3C2P08235 984 aa8.82□□□□□ -1
UBE2D3-230ENST00000510599 C6orf118Q5T5N4 469 aa8.82□□□□□ -1
UBE2D3-230ENST00000510599 SOBPA7XYQ1 873 aa8.81□□□□□ -1
UBE2D3-230ENST00000510599 GRM5P41594 1212 aa8.81□□□□□ -1
UBE2D3-230ENST00000510599 C1QTNF2Q9BXJ5 285 aa8.81□□□□□ -1
UBE2D3-230ENST00000510599 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
UBE2D3-230ENST00000510599 VSIG8P0DPA2 414 aa8.8□□□□□ -1
UBE2D3-230ENST00000510599 BMP2P12643 396 aa8.8□□□□□ -1
UBE2D3-230ENST00000510599 FSHRP23945 695 aa8.8□□□□□ -1
UBE2D3-230ENST00000510599 CLK2P49760 499 aaKnown RBP8.8□□□□□ -1
UBE2D3-230ENST00000510599 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
UBE2D3-230ENST00000510599 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
UBE2D3-230ENST00000510599 MEIOBQ8N635 442 aa8.8□□□□□ -1
UBE2D3-230ENST00000510599 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
UBE2D3-230ENST00000510599 VASH1Q7L8A9 365 aaPredicted RBP8.79□□□□□ -1
UBE2D3-230ENST00000510599 TRMT44Q8IYL2 757 aaKnown RBP8.79□□□□□ -1
UBE2D3-230ENST00000510599 MAGEB6P1A0A0J9YX57 407 aa8.78□□□□□ -1
UBE2D3-230ENST00000510599 SH3BP5LQ7L8J4 393 aa8.78□□□□□ -1
UBE2D3-230ENST00000510599 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
UBE2D3-230ENST00000510599 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
UBE2D3-230ENST00000510599 EMILIN1Q9Y6C2 1016 aa8.77□□□□□ -1.01
UBE2D3-230ENST00000510599 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-230ENST00000510599 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
UBE2D3-230ENST00000510599 SLC24A3Q9HC58 644 aa8.76□□□□□ -1.01
UBE2D3-230ENST00000510599 TSEN34Q9BSV6 310 aaKnown RBP8.75□□□□□ -1.01
UBE2D3-230ENST00000510599 CARD14Q9BXL6 1004 aa8.75□□□□□ -1.01
UBE2D3-230ENST00000510599 SOS2Q07890 1332 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-230ENST00000510599 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
UBE2D3-230ENST00000510599 ERFEQ4G0M1 354 aa8.72□□□□□ -1.01
UBE2D3-230ENST00000510599 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
UBE2D3-230ENST00000510599 ARHGAP9Q9BRR9 750 aa8.71□□□□□ -1.02
UBE2D3-230ENST00000510599 POLR3EQ9NVU0 708 aa8.71□□□□□ -1.02
UBE2D3-230ENST00000510599 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.02
UBE2D3-230ENST00000510599 CDV3Q9UKY7 258 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-230ENST00000510599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms