RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 PNPLA6Q8IY17 1366 aa16.63■□□□□ 0.25
PRDM16-205ENST00000509860 FBLN1P23142 703 aa16.63■□□□□ 0.25
PRDM16-205ENST00000509860 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRDM16-205ENST00000509860 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
PRDM16-205ENST00000509860 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
PRDM16-205ENST00000509860 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
PRDM16-205ENST00000509860 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
PRDM16-205ENST00000509860 CCDC136Q96JN2 1154 aa16.62■□□□□ 0.25
PRDM16-205ENST00000509860 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
PRDM16-205ENST00000509860 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
PRDM16-205ENST00000509860 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
PRDM16-205ENST00000509860 KCNA6P17658 529 aa16.6■□□□□ 0.25
PRDM16-205ENST00000509860 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
PRDM16-205ENST00000509860 STRCP1A6NGW2 1772 aa16.6■□□□□ 0.25
PRDM16-205ENST00000509860 PIK3R4Q99570 1358 aa16.6■□□□□ 0.25
PRDM16-205ENST00000509860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
PRDM16-205ENST00000509860 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
PRDM16-205ENST00000509860 NME9Q86XW9 330 aa16.59■□□□□ 0.25
PRDM16-205ENST00000509860 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
PRDM16-205ENST00000509860 PDE3BQ13370 1112 aa16.59■□□□□ 0.25
PRDM16-205ENST00000509860 APAF1O14727 1248 aa16.59■□□□□ 0.25
PRDM16-205ENST00000509860 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
PRDM16-205ENST00000509860 USP6P35125 1406 aa16.58■□□□□ 0.24
PRDM16-205ENST00000509860 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
PRDM16-205ENST00000509860 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
PRDM16-205ENST00000509860 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
PRDM16-205ENST00000509860 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
PRDM16-205ENST00000509860 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
PRDM16-205ENST00000509860 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
PRDM16-205ENST00000509860 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
PRDM16-205ENST00000509860 NUTM2FA1L443 756 aa16.56■□□□□ 0.24
PRDM16-205ENST00000509860 NEFLP07196 543 aa16.55■□□□□ 0.24
PRDM16-205ENST00000509860 POLKQ9UBT6 870 aa16.55■□□□□ 0.24
PRDM16-205ENST00000509860 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
PRDM16-205ENST00000509860 ACEP12821 1306 aa16.55■□□□□ 0.24
PRDM16-205ENST00000509860 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
PRDM16-205ENST00000509860 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
PRDM16-205ENST00000509860 SLFN5Q08AF3 891 aa16.53■□□□□ 0.24
PRDM16-205ENST00000509860 ANKLE2Q86XL3 938 aa16.53■□□□□ 0.24
PRDM16-205ENST00000509860 AATKQ6ZMQ8 1374 aa16.53■□□□□ 0.24
PRDM16-205ENST00000509860 ANKARQ7Z5J8 1434 aa16.52■□□□□ 0.23
PRDM16-205ENST00000509860 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
PRDM16-205ENST00000509860 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
PRDM16-205ENST00000509860 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
PRDM16-205ENST00000509860 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
PRDM16-205ENST00000509860 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
PRDM16-205ENST00000509860 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
PRDM16-205ENST00000509860 WWC1Q8IX03 1113 aa16.5■□□□□ 0.23
PRDM16-205ENST00000509860 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
PRDM16-205ENST00000509860 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
PRDM16-205ENST00000509860 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
PRDM16-205ENST00000509860 USP31Q70CQ4 1352 aa16.49■□□□□ 0.23
PRDM16-205ENST00000509860 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
PRDM16-205ENST00000509860 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
PRDM16-205ENST00000509860 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
PRDM16-205ENST00000509860 ADGRL3Q9HAR2 1447 aa16.47■□□□□ 0.23
PRDM16-205ENST00000509860 STRCQ7RTU9 1775 aa16.47■□□□□ 0.23
PRDM16-205ENST00000509860 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
PRDM16-205ENST00000509860 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
PRDM16-205ENST00000509860 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
PRDM16-205ENST00000509860 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
PRDM16-205ENST00000509860 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
PRDM16-205ENST00000509860 IL13P35225 146 aa16.45■□□□□ 0.22
PRDM16-205ENST00000509860 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRDM16-205ENST00000509860 TSHZ2Q9NRE2 1034 aa16.45■□□□□ 0.22
PRDM16-205ENST00000509860 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
PRDM16-205ENST00000509860 PLIN1O60240 522 aa16.44■□□□□ 0.22
PRDM16-205ENST00000509860 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
PRDM16-205ENST00000509860 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
PRDM16-205ENST00000509860 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
PRDM16-205ENST00000509860 CCDC27Q2M243 656 aa16.44■□□□□ 0.22
PRDM16-205ENST00000509860 DIAPH1O60610 1272 aaKnown RBP16.43■□□□□ 0.22
PRDM16-205ENST00000509860 LTN1O94822 1766 aa16.43■□□□□ 0.22
PRDM16-205ENST00000509860 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
PRDM16-205ENST00000509860 B4GALNT3Q6L9W6 998 aa16.43■□□□□ 0.22
PRDM16-205ENST00000509860 COG3Q96JB2 828 aa16.42■□□□□ 0.22
PRDM16-205ENST00000509860 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
PRDM16-205ENST00000509860 LMTK3Q96Q04 1460 aa16.41■□□□□ 0.22
PRDM16-205ENST00000509860 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
PRDM16-205ENST00000509860 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
PRDM16-205ENST00000509860 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
PRDM16-205ENST00000509860 E9PSI1 815 aa16.4■□□□□ 0.22
PRDM16-205ENST00000509860 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
PRDM16-205ENST00000509860 EXOC6Q8TAG9 804 aa16.4■□□□□ 0.22
PRDM16-205ENST00000509860 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
PRDM16-205ENST00000509860 NFAT5O94916 1531 aa16.39■□□□□ 0.21
PRDM16-205ENST00000509860 TMPOP42166 694 aaKnown RBP16.39■□□□□ 0.21
PRDM16-205ENST00000509860 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-205ENST00000509860 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
PRDM16-205ENST00000509860 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
PRDM16-205ENST00000509860 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
PRDM16-205ENST00000509860 PHRF1Q9P1Y6 1649 aaKnown RBP16.37■□□□□ 0.21
PRDM16-205ENST00000509860 DAXXQ9UER7 740 aaPredicted RBP16.36■□□□□ 0.21
PRDM16-205ENST00000509860 BCAR3O75815 825 aa16.35■□□□□ 0.21
PRDM16-205ENST00000509860 HMOX1P09601 288 aa16.35■□□□□ 0.21
PRDM16-205ENST00000509860 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
PRDM16-205ENST00000509860 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
PRDM16-205ENST00000509860 FCHSD2O94868 740 aa16.35■□□□□ 0.21
PRDM16-205ENST00000509860 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
PRDM16-205ENST00000509860 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 985.5 ms