RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ACEP12821 1306 aa30.47■■■□□ 2.47
LIN54-208ENST00000509748 CRYBG1Q9Y4K1 1723 aa30.45■■■□□ 2.47
LIN54-208ENST00000509748 PAK3O75914 559 aaPredicted RBP30.45■■■□□ 2.47
LIN54-208ENST00000509748 PLCH1Q4KWH8 1693 aa30.44■■■□□ 2.46
LIN54-208ENST00000509748 CABP2Q9NPB3 220 aa30.44■■■□□ 2.46
LIN54-208ENST00000509748 GLI3P10071 1580 aa30.44■■■□□ 2.46
LIN54-208ENST00000509748 ROCK2O75116 1388 aaKnown RBP30.43■■■□□ 2.46
LIN54-208ENST00000509748 NWD2Q9ULI1 1742 aa30.43■■■□□ 2.46
LIN54-208ENST00000509748 RALGAPBQ86X10 1494 aa30.43■■■□□ 2.46
LIN54-208ENST00000509748 SRPK2P78362 688 aaKnown RBP30.42■■■□□ 2.46
LIN54-208ENST00000509748 VPS72Q15906 364 aa30.4■■■□□ 2.46
LIN54-208ENST00000509748 PPIP5K1Q6PFW1 1433 aa30.39■■■□□ 2.45
LIN54-208ENST00000509748 NRAPQ86VF7 1730 aa30.35■■■□□ 2.45
LIN54-208ENST00000509748 COL14A1Q05707 1796 aaKnown RBP30.34■■■□□ 2.45
LIN54-208ENST00000509748 ATAD2Q6PL18 1390 aa30.34■■■□□ 2.45
LIN54-208ENST00000509748 EVC2Q86UK5 1308 aa30.33■■■□□ 2.45
LIN54-208ENST00000509748 NUTM2GQ5VZR2 741 aa30.33■■■□□ 2.45
LIN54-208ENST00000509748 BTG4Q9NY30 223 aa30.33■■■□□ 2.45
LIN54-208ENST00000509748 CABP1Q9NZU7 370 aa30.33■■■□□ 2.45
LIN54-208ENST00000509748 TONSLQ96HA7 1378 aa30.32■■■□□ 2.44
LIN54-208ENST00000509748 ONECUT3O60422 494 aaPredicted RBP30.31■■■□□ 2.44
LIN54-208ENST00000509748 PHRF1Q9P1Y6 1649 aaKnown RBP30.31■■■□□ 2.44
LIN54-208ENST00000509748 EP400Q96L91 3159 aa30.3■■■□□ 2.44
LIN54-208ENST00000509748 ABTB2Q8N961 1025 aa30.28■■■□□ 2.44
LIN54-208ENST00000509748 KIAA0232Q92628 1395 aa30.28■■■□□ 2.44
LIN54-208ENST00000509748 BRWD3Q6RI45 1802 aa30.27■■■□□ 2.44
LIN54-208ENST00000509748 PRDM11Q9NQV5 511 aa30.27■■■□□ 2.44
LIN54-208ENST00000509748 SEPT12Q8IYM1 358 aa30.26■■■□□ 2.43
LIN54-208ENST00000509748 CARD11Q9BXL7 1154 aa30.26■■■□□ 2.43
LIN54-208ENST00000509748 CCDC9Q9Y3X0 531 aaKnown RBP30.26■■■□□ 2.43
LIN54-208ENST00000509748 BRD4O60885 1362 aaPredicted RBP30.26■■■□□ 2.43
LIN54-208ENST00000509748 USP19O94966 1318 aa30.25■■■□□ 2.43
LIN54-208ENST00000509748 USP6P35125 1406 aa30.25■■■□□ 2.43
LIN54-208ENST00000509748 SSH2Q76I76 1423 aa30.24■■■□□ 2.43
LIN54-208ENST00000509748 ZC3H6P61129 1189 aaKnown RBP30.24■■■□□ 2.43
LIN54-208ENST00000509748 SBNO2Q9Y2G9 1366 aa30.24■■■□□ 2.43
LIN54-208ENST00000509748 CHRNA2Q15822 529 aa30.23■■■□□ 2.43
LIN54-208ENST00000509748 NRKQ7Z2Y5 1582 aa30.21■■■□□ 2.43
LIN54-208ENST00000509748 SPATA31A5Q5VU36 1347 aa30.21■■■□□ 2.43
LIN54-208ENST00000509748 SPATA31A7Q8IWB4 1347 aa30.21■■■□□ 2.43
LIN54-208ENST00000509748 NLRP13Q86W25 1043 aa30.2■■■□□ 2.43
LIN54-208ENST00000509748 CPDO75976 1380 aa30.17■■■□□ 2.42
LIN54-208ENST00000509748 GCP02774 474 aa30.17■■■□□ 2.42
LIN54-208ENST00000509748 FAM98CQ17RN3 349 aaKnown RBP30.17■■■□□ 2.42
LIN54-208ENST00000509748 AKAP12Q02952 1782 aa30.15■■■□□ 2.42
LIN54-208ENST00000509748 ZNF692Q9BU19 519 aaPredicted RBP30.15■■■□□ 2.42
LIN54-208ENST00000509748 CPSF1Q10570 1443 aaKnown RBP30.14■■■□□ 2.42
LIN54-208ENST00000509748 CCDC125Q86Z20 511 aa30.14■■■□□ 2.42
LIN54-208ENST00000509748 CAMTA1Q9Y6Y1 1673 aa30.14■■■□□ 2.41
LIN54-208ENST00000509748 NLRP6P59044 892 aa30.13■■■□□ 2.41
LIN54-208ENST00000509748 PIK3C2AO00443 1686 aa30.13■■■□□ 2.41
LIN54-208ENST00000509748 LMO7Q8WWI1 1683 aa30.13■■■□□ 2.41
LIN54-208ENST00000509748 KRT27Q7Z3Y8 459 aa30.12■■■□□ 2.41
LIN54-208ENST00000509748 SPATA31A1Q5TZJ5 1347 aa30.12■■■□□ 2.41
LIN54-208ENST00000509748 TTC21BQ7Z4L5 1316 aa30.12■■■□□ 2.41
LIN54-208ENST00000509748 SLIT3O75094 1523 aa30.11■■■□□ 2.41
LIN54-208ENST00000509748 STRN4Q9NRL3 753 aa30.1■■■□□ 2.41
LIN54-208ENST00000509748 THSD7AQ9UPZ6 1657 aa30.08■■■□□ 2.41
LIN54-208ENST00000509748 TESK2Q96S53 571 aa30.07■■■□□ 2.4
LIN54-208ENST00000509748 CD163L1Q9NR16 1453 aa30.06■■■□□ 2.4
LIN54-208ENST00000509748 BLMP54132 1417 aaPredicted RBP30.06■■■□□ 2.4
LIN54-208ENST00000509748 KTN1Q86UP2 1357 aaKnown RBP30.05■■■□□ 2.4
LIN54-208ENST00000509748 A0A0G2JS52 829 aa30.05■■■□□ 2.4
LIN54-208ENST00000509748 MYT1Q01538 1121 aa30.05■■■□□ 2.4
LIN54-208ENST00000509748 TTC21AQ8NDW8 1320 aa30.04■■■□□ 2.4
LIN54-208ENST00000509748 EVA1CP58658 441 aa30.04■■■□□ 2.4
LIN54-208ENST00000509748 LARP1Q6PKG0 1096 aaKnown RBP30.04■■■□□ 2.4
LIN54-208ENST00000509748 MON2Q7Z3U7 1717 aa30.04■■■□□ 2.4
LIN54-208ENST00000509748 ST20-MTHFSA0A0A6YYL1 179 aa30.03■■■□□ 2.4
LIN54-208ENST00000509748 PUS7Q96PZ0 661 aaKnown RBP30.03■■■□□ 2.4
LIN54-208ENST00000509748 SLC12A5Q9H2X9 1139 aa30.02■■■□□ 2.4
LIN54-208ENST00000509748 COL18A1P39060 1754 aa30.01■■■□□ 2.39
LIN54-208ENST00000509748 AATKQ6ZMQ8 1374 aa30.01■■■□□ 2.39
LIN54-208ENST00000509748 COL5A2P05997 1499 aaPredicted RBP30■■■□□ 2.39
LIN54-208ENST00000509748 BARGINQ6ZT62 677 aa29.99■■■□□ 2.39
LIN54-208ENST00000509748 FAM182BQ5T319 152 aa29.98■■■□□ 2.39
LIN54-208ENST00000509748 TMC1Q8TDI8 760 aa29.98■■■□□ 2.39
LIN54-208ENST00000509748 USP35Q9P2H5 1018 aa29.98■■■□□ 2.39
LIN54-208ENST00000509748 DEFB132Q7Z7B7 95 aa29.97■■■□□ 2.39
LIN54-208ENST00000509748 ARHGEF25Q86VW2 580 aa29.97■■■□□ 2.39
LIN54-208ENST00000509748 PCGF6Q9BYE7 350 aa29.97■■■□□ 2.39
LIN54-208ENST00000509748 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
LIN54-208ENST00000509748 USP31Q70CQ4 1352 aa29.95■■■□□ 2.39
LIN54-208ENST00000509748 ZBTB7CA1YPR0 619 aa29.95■■■□□ 2.39
LIN54-208ENST00000509748 TCP11L2Q8N4U5 519 aa29.95■■■□□ 2.39
LIN54-208ENST00000509748 AXIN2Q9Y2T1 843 aa29.95■■■□□ 2.39
LIN54-208ENST00000509748 CLSPNQ9HAW4 1339 aa29.95■■■□□ 2.38
LIN54-208ENST00000509748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.94■■■□□ 2.38
LIN54-208ENST00000509748 KCNH5Q8NCM2 988 aa29.94■■■□□ 2.38
LIN54-208ENST00000509748 NFAT5O94916 1531 aa29.94■■■□□ 2.38
LIN54-208ENST00000509748 TIMELESSQ9UNS1 1208 aa29.93■■■□□ 2.38
LIN54-208ENST00000509748 HDGFL2Q7Z4V5 671 aaPredicted RBP29.92■■■□□ 2.38
LIN54-208ENST00000509748 NME9Q86XW9 330 aa29.92■■■□□ 2.38
LIN54-208ENST00000509748 USP54Q70EL1 1684 aa29.91■■■□□ 2.38
LIN54-208ENST00000509748 A0A1W2PP64 1363 aa29.91■■■□□ 2.38
LIN54-208ENST00000509748 THRAP3Q9Y2W1 955 aaKnown RBP29.91■■■□□ 2.38
LIN54-208ENST00000509748 USP47Q96K76 1375 aa29.9■■■□□ 2.38
LIN54-208ENST00000509748 CRB1P82279 1406 aa29.9■■■□□ 2.38
LIN54-208ENST00000509748 SOX12O15370 315 aa29.9■■■□□ 2.38
LIN54-208ENST00000509748 SF3B2Q13435 895 aaKnown RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms