RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
TRIM41-204ENST00000508930 CD2BP2O95400 341 aaKnown RBP17.74■□□□□ 0.43
TRIM41-204ENST00000508930 KLHL40Q2TBA0 621 aa17.73■□□□□ 0.43
TRIM41-204ENST00000508930 TBC1D9Q6ZT07 1266 aa17.73■□□□□ 0.43
TRIM41-204ENST00000508930 CHMP4BQ9H444 224 aaKnown RBP17.73■□□□□ 0.43
TRIM41-204ENST00000508930 OFD1O75665 1012 aa17.73■□□□□ 0.43
TRIM41-204ENST00000508930 DDIT3P35638 169 aa17.73■□□□□ 0.43
TRIM41-204ENST00000508930 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
TRIM41-204ENST00000508930 PPP1R9BQ96SB3 815 aa17.71■□□□□ 0.43
TRIM41-204ENST00000508930 PTPRTO14522 1441 aa17.71■□□□□ 0.43
TRIM41-204ENST00000508930 GGNBP2Q9H3C7 697 aa17.71■□□□□ 0.43
TRIM41-204ENST00000508930 CDC45O75419 566 aa17.71■□□□□ 0.43
TRIM41-204ENST00000508930 NUCB2P80303 420 aa17.71■□□□□ 0.43
TRIM41-204ENST00000508930 PTMAP06454 111 aaKnown RBP17.7■□□□□ 0.42
TRIM41-204ENST00000508930 MYOM1P52179 1685 aa17.7■□□□□ 0.42
TRIM41-204ENST00000508930 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
TRIM41-204ENST00000508930 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
TRIM41-204ENST00000508930 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
TRIM41-204ENST00000508930 NCOA3Q9Y6Q9 1424 aa17.69■□□□□ 0.42
TRIM41-204ENST00000508930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.69■□□□□ 0.42
TRIM41-204ENST00000508930 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
TRIM41-204ENST00000508930 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
TRIM41-204ENST00000508930 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
TRIM41-204ENST00000508930 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
TRIM41-204ENST00000508930 EVC2Q86UK5 1308 aa17.69■□□□□ 0.42
TRIM41-204ENST00000508930 TRPM2O94759 1503 aa17.69■□□□□ 0.42
TRIM41-204ENST00000508930 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
TRIM41-204ENST00000508930 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
TRIM41-204ENST00000508930 FOXD4L5Q5VV16 416 aaPredicted RBP17.68■□□□□ 0.42
TRIM41-204ENST00000508930 FOXD4L4Q8WXT5 416 aaPredicted RBP17.68■□□□□ 0.42
TRIM41-204ENST00000508930 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
TRIM41-204ENST00000508930 IQSEC2Q5JU85 1478 aa17.67■□□□□ 0.42
TRIM41-204ENST00000508930 RABEP1Q15276 862 aa17.67■□□□□ 0.42
TRIM41-204ENST00000508930 ZNF518AQ6AHZ1 1483 aa17.67■□□□□ 0.42
TRIM41-204ENST00000508930 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
TRIM41-204ENST00000508930 UQCRHP07919 91 aa17.66■□□□□ 0.42
TRIM41-204ENST00000508930 MAP7D2Q96T17 732 aa17.66■□□□□ 0.42
TRIM41-204ENST00000508930 KIF2CQ99661 725 aa17.66■□□□□ 0.42
TRIM41-204ENST00000508930 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
TRIM41-204ENST00000508930 DNTTIP2Q5QJE6 756 aaKnown RBP17.66■□□□□ 0.42
TRIM41-204ENST00000508930 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
TRIM41-204ENST00000508930 CLTCL1P53675 1640 aa17.65■□□□□ 0.42
TRIM41-204ENST00000508930 CEP152O94986 1710 aa17.65■□□□□ 0.42
TRIM41-204ENST00000508930 APBB1O00213 710 aa17.65■□□□□ 0.42
TRIM41-204ENST00000508930 SPHKAPQ2M3C7 1700 aa17.65■□□□□ 0.42
TRIM41-204ENST00000508930 PLCH2O75038 1416 aa17.64■□□□□ 0.42
TRIM41-204ENST00000508930 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
TRIM41-204ENST00000508930 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
TRIM41-204ENST00000508930 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
TRIM41-204ENST00000508930 STK26Q9P289 416 aa17.64■□□□□ 0.41
TRIM41-204ENST00000508930 NOS1P29475 1434 aa17.64■□□□□ 0.41
TRIM41-204ENST00000508930 ST18O60284 1047 aa17.63■□□□□ 0.41
TRIM41-204ENST00000508930 ALDH1L2Q3SY69 923 aa17.63■□□□□ 0.41
TRIM41-204ENST00000508930 RBM27Q9P2N5 1060 aaKnown RBP17.63■□□□□ 0.41
TRIM41-204ENST00000508930 RBSNQ9H1K0 784 aa17.63■□□□□ 0.41
TRIM41-204ENST00000508930 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
TRIM41-204ENST00000508930 RNF214Q8ND24 703 aa17.63■□□□□ 0.41
TRIM41-204ENST00000508930 CFAP44Q96MT7 982 aa17.63■□□□□ 0.41
TRIM41-204ENST00000508930 IL16Q14005 1332 aa17.62■□□□□ 0.41
TRIM41-204ENST00000508930 PRIM1P49642 420 aaKnown RBP17.62■□□□□ 0.41
TRIM41-204ENST00000508930 CSPP1Q1MSJ5 1256 aa17.62■□□□□ 0.41
TRIM41-204ENST00000508930 ZNF445P59923 1031 aa17.62■□□□□ 0.41
TRIM41-204ENST00000508930 C14orf93Q9H972 538 aaKnown RBP17.6■□□□□ 0.41
TRIM41-204ENST00000508930 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
TRIM41-204ENST00000508930 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 HS1BP3Q53T59 392 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
TRIM41-204ENST00000508930 LMBRD1Q9NUN5 540 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 SYCE3A1L190 88 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
TRIM41-204ENST00000508930 GGT6Q6P531 493 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 PLEKHF1Q96S99 279 aa17.59■□□□□ 0.41
TRIM41-204ENST00000508930 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
TRIM41-204ENST00000508930 TERF1P54274 439 aa17.58■□□□□ 0.41
TRIM41-204ENST00000508930 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
TRIM41-204ENST00000508930 NSD2O96028 1365 aa17.58■□□□□ 0.4
TRIM41-204ENST00000508930 IBTKQ9P2D0 1353 aaPredicted RBP17.58■□□□□ 0.4
TRIM41-204ENST00000508930 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
TRIM41-204ENST00000508930 TERF2IPQ9NYB0 399 aa17.58■□□□□ 0.4
TRIM41-204ENST00000508930 PKP1Q13835 747 aa17.57■□□□□ 0.4
TRIM41-204ENST00000508930 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
TRIM41-204ENST00000508930 ANKRD36BQ8N2N9 1353 aa17.57■□□□□ 0.4
TRIM41-204ENST00000508930 ZKSCAN5Q9Y2L8 839 aa17.57■□□□□ 0.4
TRIM41-204ENST00000508930 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
TRIM41-204ENST00000508930 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
TRIM41-204ENST00000508930 HMOX1P09601 288 aa17.56■□□□□ 0.4
TRIM41-204ENST00000508930 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
TRIM41-204ENST00000508930 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
TRIM41-204ENST00000508930 MAP3K4Q9Y6R4 1608 aa17.55■□□□□ 0.4
TRIM41-204ENST00000508930 MYOM2P54296 1465 aa17.55■□□□□ 0.4
TRIM41-204ENST00000508930 ABCA6Q8N139 1617 aa17.55■□□□□ 0.4
TRIM41-204ENST00000508930 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
TRIM41-204ENST00000508930 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
TRIM41-204ENST00000508930 CLEC17AQ6ZS10 378 aa17.55■□□□□ 0.4
TRIM41-204ENST00000508930 NOL8Q76FK4 1167 aaKnown RBP17.55■□□□□ 0.4
TRIM41-204ENST00000508930 MTERF4Q7Z6M4 381 aaKnown RBP17.55■□□□□ 0.4
TRIM41-204ENST00000508930 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
TRIM41-204ENST00000508930 ZNF500O60304 480 aaPredicted RBP17.54■□□□□ 0.4
TRIM41-204ENST00000508930 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms