RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 NEUROD1Q13562 356 aa29.99■■■□□ 2.39
CLDND1-216ENST00000507944 ACEP12821 1306 aa29.97■■■□□ 2.39
CLDND1-216ENST00000507944 PLEKHG3A1L390 1219 aa29.97■■■□□ 2.39
CLDND1-216ENST00000507944 NBPF8Q3BBV2 869 aa29.97■■■□□ 2.39
CLDND1-216ENST00000507944 BTG4Q9NY30 223 aa29.97■■■□□ 2.39
CLDND1-216ENST00000507944 POLR3AO14802 1390 aaPredicted RBP29.96■■■□□ 2.39
CLDND1-216ENST00000507944 SEPT12Q8IYM1 358 aa29.96■■■□□ 2.39
CLDND1-216ENST00000507944 ONECUT3O60422 494 aaPredicted RBP29.94■■■□□ 2.38
CLDND1-216ENST00000507944 SRPK2P78362 688 aaKnown RBP29.94■■■□□ 2.38
CLDND1-216ENST00000507944 CCDC125Q86Z20 511 aa29.94■■■□□ 2.38
CLDND1-216ENST00000507944 TOPAZ1Q8N9V7 1692 aa29.94■■■□□ 2.38
CLDND1-216ENST00000507944 BRWD3Q6RI45 1802 aa29.92■■■□□ 2.38
CLDND1-216ENST00000507944 COL14A1Q05707 1796 aaKnown RBP29.92■■■□□ 2.38
CLDND1-216ENST00000507944 CRYBG1Q9Y4K1 1723 aa29.91■■■□□ 2.38
CLDND1-216ENST00000507944 CABP2Q9NPB3 220 aa29.91■■■□□ 2.38
CLDND1-216ENST00000507944 NUTM2GQ5VZR2 741 aa29.9■■■□□ 2.38
CLDND1-216ENST00000507944 PRDM11Q9NQV5 511 aa29.9■■■□□ 2.38
CLDND1-216ENST00000507944 NRAPQ86VF7 1730 aa29.89■■■□□ 2.38
CLDND1-216ENST00000507944 EP400Q96L91 3159 aa29.89■■■□□ 2.38
CLDND1-216ENST00000507944 QRICH2Q9H0J4 1663 aa29.87■■■□□ 2.37
CLDND1-216ENST00000507944 PPIP5K1Q6PFW1 1433 aa29.87■■■□□ 2.37
CLDND1-216ENST00000507944 TRPM1Q7Z4N2 1603 aa29.85■■■□□ 2.37
CLDND1-216ENST00000507944 ABTB2Q8N961 1025 aa29.85■■■□□ 2.37
CLDND1-216ENST00000507944 KIAA0232Q92628 1395 aa29.85■■■□□ 2.37
CLDND1-216ENST00000507944 A0A0G2JS52 829 aa29.84■■■□□ 2.37
CLDND1-216ENST00000507944 ZC3H6P61129 1189 aaKnown RBP29.84■■■□□ 2.37
CLDND1-216ENST00000507944 MYT1Q01538 1121 aa29.84■■■□□ 2.37
CLDND1-216ENST00000507944 FAM98CQ17RN3 349 aaKnown RBP29.84■■■□□ 2.37
CLDND1-216ENST00000507944 KRT27Q7Z3Y8 459 aa29.84■■■□□ 2.37
CLDND1-216ENST00000507944 ROCK2O75116 1388 aaKnown RBP29.83■■■□□ 2.37
CLDND1-216ENST00000507944 SPATA31A5Q5VU36 1347 aa29.82■■■□□ 2.36
CLDND1-216ENST00000507944 SPATA31A7Q8IWB4 1347 aa29.82■■■□□ 2.36
CLDND1-216ENST00000507944 CHRNA2Q15822 529 aa29.82■■■□□ 2.36
CLDND1-216ENST00000507944 CABP1Q9NZU7 370 aa29.81■■■□□ 2.36
CLDND1-216ENST00000507944 PHRF1Q9P1Y6 1649 aaKnown RBP29.81■■■□□ 2.36
CLDND1-216ENST00000507944 BLMP54132 1417 aaPredicted RBP29.8■■■□□ 2.36
CLDND1-216ENST00000507944 EVC2Q86UK5 1308 aa29.8■■■□□ 2.36
CLDND1-216ENST00000507944 NLRP13Q86W25 1043 aa29.78■■■□□ 2.36
CLDND1-216ENST00000507944 BRD4O60885 1362 aaPredicted RBP29.77■■■□□ 2.36
CLDND1-216ENST00000507944 STRN4Q9NRL3 753 aa29.76■■■□□ 2.35
CLDND1-216ENST00000507944 ZRANB1Q9UGI0 708 aa29.76■■■□□ 2.35
CLDND1-216ENST00000507944 USP19O94966 1318 aa29.75■■■□□ 2.35
CLDND1-216ENST00000507944 SF3B2Q13435 895 aaKnown RBP29.75■■■□□ 2.35
CLDND1-216ENST00000507944 SPATA31A1Q5TZJ5 1347 aa29.72■■■□□ 2.35
CLDND1-216ENST00000507944 GCP02774 474 aa29.72■■■□□ 2.35
CLDND1-216ENST00000507944 EVA1CP58658 441 aa29.72■■■□□ 2.35
CLDND1-216ENST00000507944 USP6P35125 1406 aa29.71■■■□□ 2.35
CLDND1-216ENST00000507944 DEFB132Q7Z7B7 95 aa29.71■■■□□ 2.35
CLDND1-216ENST00000507944 NRKQ7Z2Y5 1582 aa29.71■■■□□ 2.35
CLDND1-216ENST00000507944 CPDO75976 1380 aa29.7■■■□□ 2.35
CLDND1-216ENST00000507944 NLRP6P59044 892 aa29.69■■■□□ 2.34
CLDND1-216ENST00000507944 CAMTA1Q9Y6Y1 1673 aa29.66■■■□□ 2.34
CLDND1-216ENST00000507944 ZNF692Q9BU19 519 aaPredicted RBP29.66■■■□□ 2.34
CLDND1-216ENST00000507944 CARD11Q9BXL7 1154 aa29.66■■■□□ 2.34
CLDND1-216ENST00000507944 THSD7AQ9UPZ6 1657 aa29.66■■■□□ 2.34
CLDND1-216ENST00000507944 TONSLQ96HA7 1378 aa29.65■■■□□ 2.34
CLDND1-216ENST00000507944 SSH2Q76I76 1423 aa29.65■■■□□ 2.34
CLDND1-216ENST00000507944 FAM182BQ5T319 152 aa29.65■■■□□ 2.34
CLDND1-216ENST00000507944 USP35Q9P2H5 1018 aa29.65■■■□□ 2.34
CLDND1-216ENST00000507944 TRIM26Q12899 539 aaPredicted RBP29.64■■■□□ 2.34
CLDND1-216ENST00000507944 LARP1Q6PKG0 1096 aaKnown RBP29.63■■■□□ 2.33
CLDND1-216ENST00000507944 LMO7Q8WWI1 1683 aa29.61■■■□□ 2.33
CLDND1-216ENST00000507944 BARGINQ6ZT62 677 aa29.61■■■□□ 2.33
CLDND1-216ENST00000507944 ZBTB7CA1YPR0 619 aa29.6■■■□□ 2.33
CLDND1-216ENST00000507944 BAG6P46379 1132 aa29.6■■■□□ 2.33
CLDND1-216ENST00000507944 TTC21BQ7Z4L5 1316 aa29.6■■■□□ 2.33
CLDND1-216ENST00000507944 TCP11L2Q8N4U5 519 aa29.58■■■□□ 2.33
CLDND1-216ENST00000507944 SBNO2Q9Y2G9 1366 aa29.58■■■□□ 2.33
CLDND1-216ENST00000507944 SLIT3O75094 1523 aa29.57■■■□□ 2.32
CLDND1-216ENST00000507944 AKAP12Q02952 1782 aa29.57■■■□□ 2.32
CLDND1-216ENST00000507944 PIK3C2AO00443 1686 aa29.56■■■□□ 2.32
CLDND1-216ENST00000507944 CPSF1Q10570 1443 aaKnown RBP29.55■■■□□ 2.32
CLDND1-216ENST00000507944 AATKQ6ZMQ8 1374 aa29.54■■■□□ 2.32
CLDND1-216ENST00000507944 TTC21AQ8NDW8 1320 aa29.54■■■□□ 2.32
CLDND1-216ENST00000507944 FAM196AQ6ZSG2 479 aa29.54■■■□□ 2.32
CLDND1-216ENST00000507944 THRAP3Q9Y2W1 955 aaKnown RBP29.54■■■□□ 2.32
CLDND1-216ENST00000507944 COL5A2P05997 1499 aaPredicted RBP29.54■■■□□ 2.32
CLDND1-216ENST00000507944 KTN1Q86UP2 1357 aaKnown RBP29.53■■■□□ 2.32
CLDND1-216ENST00000507944 PDE3BQ13370 1112 aa29.53■■■□□ 2.32
CLDND1-216ENST00000507944 RGPD1P0DJD0 1748 aa29.53■■■□□ 2.32
CLDND1-216ENST00000507944 EN1Q05925 392 aaPredicted RBP29.51■■■□□ 2.31
CLDND1-216ENST00000507944 KCNH5Q8NCM2 988 aa29.51■■■□□ 2.31
CLDND1-216ENST00000507944 SRCAPQ6ZRS2 3230 aa29.5■■■□□ 2.31
CLDND1-216ENST00000507944 CRB1P82279 1406 aa29.49■■■□□ 2.31
CLDND1-216ENST00000507944 SOX12O15370 315 aa29.48■■■□□ 2.31
CLDND1-216ENST00000507944 TRIM37O94972 964 aa29.48■■■□□ 2.31
CLDND1-216ENST00000507944 ARHGEF25Q86VW2 580 aa29.48■■■□□ 2.31
CLDND1-216ENST00000507944 TMC1Q8TDI8 760 aa29.48■■■□□ 2.31
CLDND1-216ENST00000507944 COL18A1P39060 1754 aa29.47■■■□□ 2.31
CLDND1-216ENST00000507944 AXIN2Q9Y2T1 843 aa29.47■■■□□ 2.31
CLDND1-216ENST00000507944 TOM1L2Q6ZVM7 507 aa29.45■■■□□ 2.31
CLDND1-216ENST00000507944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.45■■■□□ 2.31
CLDND1-216ENST00000507944 SLC12A5Q9H2X9 1139 aa29.44■■■□□ 2.3
CLDND1-216ENST00000507944 MON2Q7Z3U7 1717 aa29.44■■■□□ 2.3
CLDND1-216ENST00000507944 DISP2A7MBM2 1401 aa29.44■■■□□ 2.3
CLDND1-216ENST00000507944 TNS1Q9HBL0 1735 aaKnown RBP29.43■■■□□ 2.3
CLDND1-216ENST00000507944 HDGFL2Q7Z4V5 671 aaPredicted RBP29.43■■■□□ 2.3
CLDND1-216ENST00000507944 PUS7Q96PZ0 661 aaKnown RBP29.43■■■□□ 2.3
CLDND1-216ENST00000507944 CD163L1Q9NR16 1453 aa29.42■■■□□ 2.3
CLDND1-216ENST00000507944 WDR17Q8IZU2 1322 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms