RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 MAP2K2P36507 400 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 ANKRD7Q92527 254 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 ANKRD18BA2A2Z9 1011 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 CAND2O75155 1236 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 IRX1P78414 480 aaPredicted RBP7.48□□□□□ -1.21
PDE4D-216ENST00000507116 ANKRD20A12PQ8NF67 263 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 NUDCQ9Y266 331 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 REC8O95072 547 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 NOL8Q76FK4 1167 aaKnown RBP7.48□□□□□ -1.21
PDE4D-216ENST00000507116 SLKQ9H2G2 1235 aaPredicted RBP7.48□□□□□ -1.21
PDE4D-216ENST00000507116 RANBP17Q9H2T7 1088 aaKnown RBP7.48□□□□□ -1.21
PDE4D-216ENST00000507116 IRAK4Q9NWZ3 460 aa7.48□□□□□ -1.21
PDE4D-216ENST00000507116 NAP1L1P55209 391 aaKnown RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 MUM1L1Q5H9M0 696 aa7.47□□□□□ -1.21
PDE4D-216ENST00000507116 RBM26Q5T8P6 1007 aaKnown RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 HSP90AB1P08238 724 aaKnown RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 NOM1Q5C9Z4 860 aaKnown RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 MORC2Q9Y6X9 1032 aaPredicted RBP7.47□□□□□ -1.21
PDE4D-216ENST00000507116 EIF3JO75822 258 aaKnown RBP7.46□□□□□ -1.21
PDE4D-216ENST00000507116 KRT222Q8N1A0 295 aa7.46□□□□□ -1.21
PDE4D-216ENST00000507116 CXorf38Q8TB03 319 aa7.46□□□□□ -1.21
PDE4D-216ENST00000507116 MAF1Q9H063 256 aa7.46□□□□□ -1.21
PDE4D-216ENST00000507116 ETAA1Q9NY74 926 aa7.46□□□□□ -1.21
PDE4D-216ENST00000507116 DDX41Q9UJV9 622 aaKnown RBP7.46□□□□□ -1.21
PDE4D-216ENST00000507116 SKOR2Q2VWA4 1001 aaPredicted RBP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 APBB1IPQ7Z5R6 666 aaPredicted RBP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 CWC15Q9P013 229 aaKnown RBP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
PDE4D-216ENST00000507116 CCDC39Q9UFE4 941 aa7.46□□□□□ -1.22
PDE4D-216ENST00000507116 FRMD4BQ9Y2L6 1034 aa7.46□□□□□ -1.22
PDE4D-216ENST00000507116 PES1O00541 588 aaKnown RBP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 TPD52L2O43399 206 aaKnown RBP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 GYS2P54840 703 aa7.46□□□□□ -1.22
PDE4D-216ENST00000507116 KIAA2012Q0VF49 1180 aa7.46□□□□□ -1.22
PDE4D-216ENST00000507116 NOLC1Q14978 699 aaKnown RBP eCLIP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 SART3Q15020 963 aaKnown RBP7.46□□□□□ -1.22
PDE4D-216ENST00000507116 CCDC181Q5TID7 509 aa7.46□□□□□ -1.22
PDE4D-216ENST00000507116 MYO1CO00159 1063 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 CYP2C19P33261 490 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 FOXD4Q12950 439 aaPredicted RBP7.45□□□□□ -1.22
PDE4D-216ENST00000507116 TTC31Q49AM3 519 aaPredicted RBP7.45□□□□□ -1.22
PDE4D-216ENST00000507116 SUGP1Q8IWZ8 645 aaKnown RBP7.45□□□□□ -1.22
PDE4D-216ENST00000507116 PHF8Q9UPP1 1060 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 IBTKQ9P2D0 1353 aaPredicted RBP7.45□□□□□ -1.22
PDE4D-216ENST00000507116 ERCC3P19447 782 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 PAX3P23760 479 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 GAS2L3Q86XJ1 694 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 C10orf67Q8IYJ2 551 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 MAGEA8P43361 318 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 INHBEP58166 350 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 AP1ARQ63HQ0 302 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 MCTP2Q6DN12 878 aa7.45□□□□□ -1.22
PDE4D-216ENST00000507116 PPFIA2O75334 1257 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 CDC37Q16543 378 aaPredicted RBP7.44□□□□□ -1.22
PDE4D-216ENST00000507116 CADPS2Q86UW7 1296 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 TSC1Q92574 1164 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 C1orf115Q9H7X2 142 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 CHCHD3Q9NX63 227 aaKnown RBP7.44□□□□□ -1.22
PDE4D-216ENST00000507116 SKILP12757 684 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 RHBDL3P58872 404 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 MFSD4BQ5TF39 518 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 NUTM2GQ5VZR2 741 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 KRBA2Q6ZNG9 492 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 KCNV2Q8TDN2 545 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 PDLIM2Q96JY6 352 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 CEP89Q96ST8 783 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 TACO1Q9BSH4 297 aaKnown RBP7.44□□□□□ -1.22
PDE4D-216ENST00000507116 CTNNA3Q9UI47 895 aa7.44□□□□□ -1.22
PDE4D-216ENST00000507116 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
PDE4D-216ENST00000507116 TRAF1Q13077 416 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 SLC4A1APQ9BWU0 796 aaKnown RBP7.43□□□□□ -1.22
PDE4D-216ENST00000507116 POLKQ9UBT6 870 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 IL16Q14005 1332 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 ZRANB2O95218 330 aaKnown RBP eCLIP7.43□□□□□ -1.22
PDE4D-216ENST00000507116 ADCY2Q08462 1091 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 ZKSCAN2Q63HK3 967 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 WWC2Q6AWC2 1192 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 TRIM74Q86UV6 250 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 TRIM73Q86UV7 250 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 LARP6Q9BRS8 491 aaKnown RBP7.43□□□□□ -1.22
PDE4D-216ENST00000507116 DIAPH3Q9NSV4 1193 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 NEXNQ0ZGT2 675 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 SYCP1Q15431 976 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 HELBQ8NG08 1087 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-216ENST00000507116 ZNF396Q96N95 335 aaPredicted RBP7.43□□□□□ -1.22
PDE4D-216ENST00000507116 RMI1Q9H9A7 625 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 GOPCQ9HD26 462 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 ZNF232Q9UNY5 417 aa7.43□□□□□ -1.22
PDE4D-216ENST00000507116 C8orf34Q49A92 452 aa7.42□□□□□ -1.22
PDE4D-216ENST00000507116 AMOTQ4VCS5 1084 aa7.42□□□□□ -1.22
PDE4D-216ENST00000507116 KANK1Q14678 1352 aa7.42□□□□□ -1.22
PDE4D-216ENST00000507116 RABEP1Q15276 862 aa7.42□□□□□ -1.22
PDE4D-216ENST00000507116 TXLNBQ8N3L3 684 aa7.42□□□□□ -1.22
PDE4D-216ENST00000507116 TATDN2Q93075 761 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms