RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
SPCS3-202ENST00000507001 BMP1P13497 986 aa10.34□□□□□ -0.75
SPCS3-202ENST00000507001 BAP1Q92560 729 aa10.34□□□□□ -0.75
SPCS3-202ENST00000507001 BEGAINQ9BUH8 593 aa10.33□□□□□ -0.76
SPCS3-202ENST00000507001 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
SPCS3-202ENST00000507001 RSBN1LQ6PCB5 846 aaPredicted RBP10.32□□□□□ -0.76
SPCS3-202ENST00000507001 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
SPCS3-202ENST00000507001 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
SPCS3-202ENST00000507001 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
SPCS3-202ENST00000507001 SPTLC1O15269 473 aa10.29□□□□□ -0.76
SPCS3-202ENST00000507001 NNTQ13423 1086 aa10.29□□□□□ -0.76
SPCS3-202ENST00000507001 IRF7Q92985 503 aa10.29□□□□□ -0.76
SPCS3-202ENST00000507001 AK7Q96M32 723 aa10.29□□□□□ -0.76
SPCS3-202ENST00000507001 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
SPCS3-202ENST00000507001 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
SPCS3-202ENST00000507001 PARP9Q8IXQ6 854 aa10.28□□□□□ -0.76
SPCS3-202ENST00000507001 FAM174AQ8TBP5 190 aa10.28□□□□□ -0.76
SPCS3-202ENST00000507001 CDK15Q96Q40 435 aa10.28□□□□□ -0.76
SPCS3-202ENST00000507001 ZBTB3Q9H5J0 574 aa10.28□□□□□ -0.76
SPCS3-202ENST00000507001 H3BM21 787 aa10.27□□□□□ -0.77
SPCS3-202ENST00000507001 ADH1CP00326 375 aa10.27□□□□□ -0.77
SPCS3-202ENST00000507001 F12P00748 615 aaPredicted RBP10.27□□□□□ -0.77
SPCS3-202ENST00000507001 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
SPCS3-202ENST00000507001 ZFP42Q96MM3 310 aa10.27□□□□□ -0.77
SPCS3-202ENST00000507001 CFAP99D6REC4 459 aa10.26□□□□□ -0.77
SPCS3-202ENST00000507001 TIMP2P16035 220 aa10.26□□□□□ -0.77
SPCS3-202ENST00000507001 FAM181BA6NEQ2 426 aa10.25□□□□□ -0.77
SPCS3-202ENST00000507001 HRCP23327 699 aa10.25□□□□□ -0.77
SPCS3-202ENST00000507001 MRPL14Q6P1L8 145 aaKnown RBP10.25□□□□□ -0.77
SPCS3-202ENST00000507001 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
SPCS3-202ENST00000507001 CTHP32929 405 aa10.24□□□□□ -0.77
SPCS3-202ENST00000507001 SCARF1Q14162 830 aa10.24□□□□□ -0.77
SPCS3-202ENST00000507001 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
SPCS3-202ENST00000507001 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
SPCS3-202ENST00000507001 TRIM66O15016 1216 aa10.23□□□□□ -0.77
SPCS3-202ENST00000507001 GMPRP36959 345 aa10.23□□□□□ -0.77
SPCS3-202ENST00000507001 WDR4P57081 412 aaKnown RBP10.23□□□□□ -0.77
SPCS3-202ENST00000507001 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
SPCS3-202ENST00000507001 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
SPCS3-202ENST00000507001 GTF3C3Q9Y5Q9 886 aa10.22□□□□□ -0.77
SPCS3-202ENST00000507001 NR5A1Q13285 461 aa10.21□□□□□ -0.77
SPCS3-202ENST00000507001 NEUROD2Q15784 382 aa10.21□□□□□ -0.77
SPCS3-202ENST00000507001 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.77
SPCS3-202ENST00000507001 MAP10Q9P2G4 905 aa10.21□□□□□ -0.77
SPCS3-202ENST00000507001 ZSCAN1Q8NBB4 408 aa10.2□□□□□ -0.78
SPCS3-202ENST00000507001 FOXJ1Q92949 421 aa10.2□□□□□ -0.78
SPCS3-202ENST00000507001 VSIG8P0DPA2 414 aa10.19□□□□□ -0.78
SPCS3-202ENST00000507001 TIMELESSQ9UNS1 1208 aa10.19□□□□□ -0.78
SPCS3-202ENST00000507001 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
SPCS3-202ENST00000507001 BPHLQ86WA6 291 aaPredicted RBP10.18□□□□□ -0.78
SPCS3-202ENST00000507001 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
SPCS3-202ENST00000507001 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
SPCS3-202ENST00000507001 VEGFBP49765 207 aa10.16□□□□□ -0.78
SPCS3-202ENST00000507001 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
SPCS3-202ENST00000507001 CABLES1Q8TDN4 633 aa10.16□□□□□ -0.78
SPCS3-202ENST00000507001 C1QTNF2Q9BXJ5 285 aa10.16□□□□□ -0.78
SPCS3-202ENST00000507001 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
SPCS3-202ENST00000507001 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
SPCS3-202ENST00000507001 GRM5P41594 1212 aa10.15□□□□□ -0.78
SPCS3-202ENST00000507001 PDE4DQ08499 809 aa10.15□□□□□ -0.78
SPCS3-202ENST00000507001 MYSM1Q5VVJ2 828 aa10.15□□□□□ -0.78
SPCS3-202ENST00000507001 SH3RF1Q7Z6J0 888 aa10.15□□□□□ -0.78
SPCS3-202ENST00000507001 MAP4K5Q9Y4K4 846 aa10.15□□□□□ -0.78
SPCS3-202ENST00000507001 LILRB3O75022 631 aa10.14□□□□□ -0.79
SPCS3-202ENST00000507001 NR3C2P08235 984 aa10.14□□□□□ -0.79
SPCS3-202ENST00000507001 ITPKCQ96DU7 683 aa10.14□□□□□ -0.79
SPCS3-202ENST00000507001 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
SPCS3-202ENST00000507001 NBPF14Q5TI25 921 aa10.13□□□□□ -0.79
SPCS3-202ENST00000507001 TRMT44Q8IYL2 757 aaKnown RBP10.13□□□□□ -0.79
SPCS3-202ENST00000507001 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
SPCS3-202ENST00000507001 LIMD1Q9UGP4 676 aa10.13□□□□□ -0.79
SPCS3-202ENST00000507001 AGERQ15109 404 aa10.12□□□□□ -0.79
SPCS3-202ENST00000507001 QPCTQ16769 361 aa10.11□□□□□ -0.79
SPCS3-202ENST00000507001 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
SPCS3-202ENST00000507001 MEIOBQ8N635 442 aa10.11□□□□□ -0.79
SPCS3-202ENST00000507001 HELBQ8NG08 1087 aaPredicted RBP10.11□□□□□ -0.79
SPCS3-202ENST00000507001 SH3BP5LQ7L8J4 393 aa10.1□□□□□ -0.79
SPCS3-202ENST00000507001 GPKOWQ92917 476 aaPredicted RBP eCLIP10.1□□□□□ -0.792e-6■■■□□ 15.9
SPCS3-202ENST00000507001 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
SPCS3-202ENST00000507001 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
SPCS3-202ENST00000507001 UPP2O95045 317 aa10.09□□□□□ -0.79
SPCS3-202ENST00000507001 NUTM2DQ5VT03 806 aaPredicted RBP10.09□□□□□ -0.79
SPCS3-202ENST00000507001 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
SPCS3-202ENST00000507001 LINC00528Q8N1L1 170 aa10.09□□□□□ -0.79
SPCS3-202ENST00000507001 SOBPA7XYQ1 873 aa10.08□□□□□ -0.8
SPCS3-202ENST00000507001 MAN1A2O60476 641 aa10.08□□□□□ -0.8
SPCS3-202ENST00000507001 TSC1Q92574 1164 aa10.07□□□□□ -0.8
SPCS3-202ENST00000507001 GPBP1L1Q9HC44 474 aaPredicted RBP10.07□□□□□ -0.8
SPCS3-202ENST00000507001 FSHRP23945 695 aa10.06□□□□□ -0.8
SPCS3-202ENST00000507001 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
SPCS3-202ENST00000507001 C6orf118Q5T5N4 469 aa10.06□□□□□ -0.8
SPCS3-202ENST00000507001 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
SPCS3-202ENST00000507001 SOS2Q07890 1332 aaPredicted RBP10.06□□□□□ -0.8
SPCS3-202ENST00000507001 BMP2P12643 396 aa10.05□□□□□ -0.8
SPCS3-202ENST00000507001 VASH1Q7L8A9 365 aaPredicted RBP10.05□□□□□ -0.8
SPCS3-202ENST00000507001 PPFIA3O75145 1194 aa10.04□□□□□ -0.8
SPCS3-202ENST00000507001 TSEN34Q9BSV6 310 aaKnown RBP10.04□□□□□ -0.8
SPCS3-202ENST00000507001 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
SPCS3-202ENST00000507001 KDM4CQ9H3R0 1056 aa10.04□□□□□ -0.8
SPCS3-202ENST00000507001 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms