RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 AFF2P51816 1311 aa19.15■□□□□ 0.66
PDCD6-204ENST00000506909 ATAD2Q6PL18 1390 aa19.15■□□□□ 0.66
PDCD6-204ENST00000506909 NGLY1Q96IV0 654 aa19.14■□□□□ 0.65
PDCD6-204ENST00000506909 TESK2Q96S53 571 aa19.14■□□□□ 0.65
PDCD6-204ENST00000506909 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
PDCD6-204ENST00000506909 PAK3O75914 559 aaPredicted RBP19.13■□□□□ 0.65
PDCD6-204ENST00000506909 PUS7Q96PZ0 661 aaKnown RBP19.13■□□□□ 0.65
PDCD6-204ENST00000506909 USP47Q96K76 1375 aa19.13■□□□□ 0.65
PDCD6-204ENST00000506909 FNBP4Q8N3X1 1017 aaPredicted RBP19.12■□□□□ 0.65
PDCD6-204ENST00000506909 CABLES1Q8TDN4 633 aa19.11■□□□□ 0.65
PDCD6-204ENST00000506909 HAP1P54257 671 aaPredicted RBP19.1■□□□□ 0.65
PDCD6-204ENST00000506909 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
PDCD6-204ENST00000506909 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.1■□□□□ 0.65
PDCD6-204ENST00000506909 USP6P35125 1406 aa19.09■□□□□ 0.65
PDCD6-204ENST00000506909 MON2Q7Z3U7 1717 aa19.08■□□□□ 0.65
PDCD6-204ENST00000506909 PHRF1Q9P1Y6 1649 aaKnown RBP19.08■□□□□ 0.65
PDCD6-204ENST00000506909 NWD2Q9ULI1 1742 aa19.08■□□□□ 0.64
PDCD6-204ENST00000506909 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
PDCD6-204ENST00000506909 USP21Q9UK80 565 aa19.07■□□□□ 0.64
PDCD6-204ENST00000506909 PLCH1Q4KWH8 1693 aa19.07■□□□□ 0.64
PDCD6-204ENST00000506909 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
PDCD6-204ENST00000506909 SLIT2O94813 1529 aa19.06■□□□□ 0.64
PDCD6-204ENST00000506909 ABTB2Q8N961 1025 aa19.06■□□□□ 0.64
PDCD6-204ENST00000506909 QTRT2Q9H974 415 aaKnown RBP19.06■□□□□ 0.64
PDCD6-204ENST00000506909 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
PDCD6-204ENST00000506909 PLEKHG5O94827 1062 aa19.05■□□□□ 0.64
PDCD6-204ENST00000506909 NRKQ7Z2Y5 1582 aa19.05■□□□□ 0.64
PDCD6-204ENST00000506909 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
PDCD6-204ENST00000506909 RXRBP28702 533 aa19.04■□□□□ 0.64
PDCD6-204ENST00000506909 TMF1P82094 1093 aa19.04■□□□□ 0.64
PDCD6-204ENST00000506909 NLRP13Q86W25 1043 aa19.03■□□□□ 0.64
PDCD6-204ENST00000506909 TRPC5Q9UL62 973 aaPredicted RBP19.03■□□□□ 0.64
PDCD6-204ENST00000506909 PIK3C2AO00443 1686 aa19.03■□□□□ 0.64
PDCD6-204ENST00000506909 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
PDCD6-204ENST00000506909 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
PDCD6-204ENST00000506909 RBM6P78332 1123 aaKnown RBP19.02■□□□□ 0.64
PDCD6-204ENST00000506909 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
PDCD6-204ENST00000506909 SLC12A5Q9H2X9 1139 aa19.02■□□□□ 0.64
PDCD6-204ENST00000506909 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
PDCD6-204ENST00000506909 NINLQ9Y2I6 1382 aa19.02■□□□□ 0.64
PDCD6-204ENST00000506909 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.63
PDCD6-204ENST00000506909 USP19O94966 1318 aa19.01■□□□□ 0.63
PDCD6-204ENST00000506909 ATRNO75882 1429 aa19.01■□□□□ 0.63
PDCD6-204ENST00000506909 UNC5CLQ8IV45 518 aa19.01■□□□□ 0.63
PDCD6-204ENST00000506909 TMC1Q8TDI8 760 aa19.01■□□□□ 0.63
PDCD6-204ENST00000506909 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
PDCD6-204ENST00000506909 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
PDCD6-204ENST00000506909 CDCA8Q53HL2 280 aa19■□□□□ 0.63
PDCD6-204ENST00000506909 NRAPQ86VF7 1730 aa19■□□□□ 0.63
PDCD6-204ENST00000506909 HDGFL2Q7Z4V5 671 aaPredicted RBP18.99■□□□□ 0.63
PDCD6-204ENST00000506909 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
PDCD6-204ENST00000506909 NLRP6P59044 892 aa18.98■□□□□ 0.63
PDCD6-204ENST00000506909 EIF4G2P78344 907 aaKnown RBP eCLIP18.98■□□□□ 0.633e-7■■■■■ 50.1
PDCD6-204ENST00000506909 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
PDCD6-204ENST00000506909 SLIT3O75094 1523 aa18.97■□□□□ 0.63
PDCD6-204ENST00000506909 A0A1W2PP64 1363 aa18.96■□□□□ 0.63
PDCD6-204ENST00000506909 GCP02774 474 aa18.96■□□□□ 0.63
PDCD6-204ENST00000506909 GJD4Q96KN9 370 aaPredicted RBP18.96■□□□□ 0.63
PDCD6-204ENST00000506909 PRDM11Q9NQV5 511 aa18.96■□□□□ 0.63
PDCD6-204ENST00000506909 CPDO75976 1380 aa18.95■□□□□ 0.62
PDCD6-204ENST00000506909 KIAA0232Q92628 1395 aa18.95■□□□□ 0.62
PDCD6-204ENST00000506909 EDC4Q6P2E9 1401 aaKnown RBP18.95■□□□□ 0.62
PDCD6-204ENST00000506909 ZC3H6P61129 1189 aaKnown RBP18.94■□□□□ 0.62
PDCD6-204ENST00000506909 VPS72Q15906 364 aa18.94■□□□□ 0.62
PDCD6-204ENST00000506909 BTG4Q9NY30 223 aa18.94■□□□□ 0.62
PDCD6-204ENST00000506909 MYOM1P52179 1685 aa18.94■□□□□ 0.62
PDCD6-204ENST00000506909 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
PDCD6-204ENST00000506909 GLI3P10071 1580 aa18.93■□□□□ 0.62
PDCD6-204ENST00000506909 USP31Q70CQ4 1352 aa18.93■□□□□ 0.62
PDCD6-204ENST00000506909 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
PDCD6-204ENST00000506909 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
PDCD6-204ENST00000506909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDCD6-204ENST00000506909 RGS12O14924 1447 aa18.91■□□□□ 0.62
PDCD6-204ENST00000506909 KCNH5Q8NCM2 988 aa18.91■□□□□ 0.62
PDCD6-204ENST00000506909 CHRNA2Q15822 529 aa18.9■□□□□ 0.62
PDCD6-204ENST00000506909 COL18A1P39060 1754 aa18.9■□□□□ 0.62
PDCD6-204ENST00000506909 RGPD5Q99666 1765 aa18.89■□□□□ 0.61
PDCD6-204ENST00000506909 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
PDCD6-204ENST00000506909 NME9Q86XW9 330 aa18.88■□□□□ 0.61
PDCD6-204ENST00000506909 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
PDCD6-204ENST00000506909 LTN1O94822 1766 aa18.87■□□□□ 0.61
PDCD6-204ENST00000506909 NFAT5O94916 1531 aa18.87■□□□□ 0.61
PDCD6-204ENST00000506909 AATKQ6ZMQ8 1374 aa18.86■□□□□ 0.61
PDCD6-204ENST00000506909 ONECUT3O60422 494 aaPredicted RBP18.86■□□□□ 0.61
PDCD6-204ENST00000506909 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
PDCD6-204ENST00000506909 CCDC9Q9Y3X0 531 aaKnown RBP18.86■□□□□ 0.61
PDCD6-204ENST00000506909 SPATA31A5Q5VU36 1347 aa18.85■□□□□ 0.61
PDCD6-204ENST00000506909 SPATA31A7Q8IWB4 1347 aa18.85■□□□□ 0.61
PDCD6-204ENST00000506909 ARHGEF25Q86VW2 580 aa18.85■□□□□ 0.61
PDCD6-204ENST00000506909 KIF20BQ96Q89 1820 aa18.85■□□□□ 0.61
PDCD6-204ENST00000506909 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
PDCD6-204ENST00000506909 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
PDCD6-204ENST00000506909 EVA1CP58658 441 aa18.83■□□□□ 0.6
PDCD6-204ENST00000506909 STRN4Q9NRL3 753 aa18.82■□□□□ 0.6
PDCD6-204ENST00000506909 ABCC6O95255 1503 aa18.82■□□□□ 0.6
PDCD6-204ENST00000506909 COL5A2P05997 1499 aaPredicted RBP18.82■□□□□ 0.6
PDCD6-204ENST00000506909 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
PDCD6-204ENST00000506909 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
PDCD6-204ENST00000506909 FYB1O15117 783 aa18.8■□□□□ 0.6
PDCD6-204ENST00000506909 SOX12O15370 315 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms