RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 FKBPLQ9UIM3 349 aa11.54□□□□□ -0.56
NIPBL-205ENST00000505998 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
NIPBL-205ENST00000505998 ABL2P42684 1182 aa11.52□□□□□ -0.57
NIPBL-205ENST00000505998 RPIAP49247 311 aa11.51□□□□□ -0.57
NIPBL-205ENST00000505998 NBPF14Q5TI25 921 aa11.51□□□□□ -0.57
NIPBL-205ENST00000505998 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
NIPBL-205ENST00000505998 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
NIPBL-205ENST00000505998 ZMYND15Q9H091 742 aa11.5□□□□□ -0.57
NIPBL-205ENST00000505998 TRIM32Q13049 653 aa11.49□□□□□ -0.57
NIPBL-205ENST00000505998 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
NIPBL-205ENST00000505998 WWC1Q8IX03 1113 aa11.49□□□□□ -0.57
NIPBL-205ENST00000505998 BAP1Q92560 729 aa11.49□□□□□ -0.57
NIPBL-205ENST00000505998 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.57
NIPBL-205ENST00000505998 A6NJR5 290 aa11.48□□□□□ -0.57
NIPBL-205ENST00000505998 CD2BP2O95400 341 aaKnown RBP11.48□□□□□ -0.57
NIPBL-205ENST00000505998 SLC19A1P41440 591 aa11.48□□□□□ -0.57
NIPBL-205ENST00000505998 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
NIPBL-205ENST00000505998 GPR37L1O60883 481 aa11.46□□□□□ -0.57
NIPBL-205ENST00000505998 PDXDC2PQ6P474 469 aa11.46□□□□□ -0.57
NIPBL-205ENST00000505998 PROSER2Q86WR7 435 aaPredicted RBP11.46□□□□□ -0.57
NIPBL-205ENST00000505998 ZNF511Q8NB15 262 aa11.46□□□□□ -0.57
NIPBL-205ENST00000505998 EMID1Q96A84 441 aaPredicted RBP11.46□□□□□ -0.57
NIPBL-205ENST00000505998 PRKD2Q9BZL6 878 aa11.45□□□□□ -0.58
NIPBL-205ENST00000505998 SH3BP2P78314 561 aa11.44□□□□□ -0.58
NIPBL-205ENST00000505998 IRF5Q13568 498 aa11.44□□□□□ -0.58
NIPBL-205ENST00000505998 AGERQ15109 404 aa11.44□□□□□ -0.58
NIPBL-205ENST00000505998 WNT7BP56706 349 aa11.43□□□□□ -0.58
NIPBL-205ENST00000505998 PTK2Q05397 1052 aa11.43□□□□□ -0.58
NIPBL-205ENST00000505998 WASHC4Q2M389 1173 aa11.42□□□□□ -0.58
NIPBL-205ENST00000505998 SPRYD7Q5W111 196 aa11.42□□□□□ -0.58
NIPBL-205ENST00000505998 BPHLQ86WA6 291 aaPredicted RBP11.42□□□□□ -0.58
NIPBL-205ENST00000505998 ARHGAP9Q9BRR9 750 aa11.42□□□□□ -0.58
NIPBL-205ENST00000505998 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
NIPBL-205ENST00000505998 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
NIPBL-205ENST00000505998 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
NIPBL-205ENST00000505998 SKOR1P84550 965 aa11.41□□□□□ -0.58
NIPBL-205ENST00000505998 FOXJ1Q92949 421 aa11.41□□□□□ -0.58
NIPBL-205ENST00000505998 SH3BP5LQ7L8J4 393 aa11.4□□□□□ -0.58
NIPBL-205ENST00000505998 ZNF330Q9Y3S2 320 aaPredicted RBP11.4□□□□□ -0.58
NIPBL-205ENST00000505998 MAGEB6P1A0A0J9YX57 407 aa11.39□□□□□ -0.59
NIPBL-205ENST00000505998 FBXO45P0C2W1 286 aa11.39□□□□□ -0.59
NIPBL-205ENST00000505998 NR1H3Q13133 447 aa11.39□□□□□ -0.59
NIPBL-205ENST00000505998 ZBTB33Q86T24 672 aa11.39□□□□□ -0.59
NIPBL-205ENST00000505998 FNBP4Q8N3X1 1017 aaPredicted RBP11.39□□□□□ -0.59
NIPBL-205ENST00000505998 CARD14Q9BXL6 1004 aa11.39□□□□□ -0.59
NIPBL-205ENST00000505998 TRAK2O60296 914 aa11.38□□□□□ -0.59
NIPBL-205ENST00000505998 VAC14Q08AM6 782 aa11.38□□□□□ -0.59
NIPBL-205ENST00000505998 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
NIPBL-205ENST00000505998 ZNF598Q86UK7 904 aaKnown RBP11.38□□□□□ -0.59
NIPBL-205ENST00000505998 SH3RF1Q7Z6J0 888 aa11.37□□□□□ -0.59
NIPBL-205ENST00000505998 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
NIPBL-205ENST00000505998 RGS20O76081 388 aa11.36□□□□□ -0.59
NIPBL-205ENST00000505998 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
NIPBL-205ENST00000505998 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
NIPBL-205ENST00000505998 OCSTAMPQ9BR26 566 aa11.36□□□□□ -0.59
NIPBL-205ENST00000505998 VARSP26640 1264 aaKnown RBP11.35□□□□□ -0.59
NIPBL-205ENST00000505998 C4orf48Q5BLP8 95 aa11.35□□□□□ -0.59
NIPBL-205ENST00000505998 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
NIPBL-205ENST00000505998 WNT7AO00755 349 aa11.33□□□□□ -0.6
NIPBL-205ENST00000505998 FAM174AQ8TBP5 190 aa11.33□□□□□ -0.6
NIPBL-205ENST00000505998 FOXC1Q12948 553 aa11.32□□□□□ -0.6
NIPBL-205ENST00000505998 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
NIPBL-205ENST00000505998 PCDHB9Q9Y5E1 797 aa11.32□□□□□ -0.6
NIPBL-205ENST00000505998 POM121CA8CG34 1229 aa11.31□□□□□ -0.6
NIPBL-205ENST00000505998 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
NIPBL-205ENST00000505998 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
NIPBL-205ENST00000505998 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
NIPBL-205ENST00000505998 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
NIPBL-205ENST00000505998 SOX11P35716 441 aa11.3□□□□□ -0.6
NIPBL-205ENST00000505998 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
NIPBL-205ENST00000505998 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
NIPBL-205ENST00000505998 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
NIPBL-205ENST00000505998 MCCD1P59942 119 aaPredicted RBP11.28□□□□□ -0.6
NIPBL-205ENST00000505998 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
NIPBL-205ENST00000505998 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
NIPBL-205ENST00000505998 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
NIPBL-205ENST00000505998 ARID5BQ14865 1188 aa11.26□□□□□ -0.61
NIPBL-205ENST00000505998 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
NIPBL-205ENST00000505998 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
NIPBL-205ENST00000505998 SIAH2O43255 324 aa11.25□□□□□ -0.61
NIPBL-205ENST00000505998 GDF9O60383 454 aa11.25□□□□□ -0.61
NIPBL-205ENST00000505998 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
NIPBL-205ENST00000505998 GLMNQ92990 594 aa11.25□□□□□ -0.61
NIPBL-205ENST00000505998 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
NIPBL-205ENST00000505998 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
NIPBL-205ENST00000505998 ARID3CA6NKF2 412 aa11.24□□□□□ -0.61
NIPBL-205ENST00000505998 VASH1Q7L8A9 365 aaPredicted RBP11.24□□□□□ -0.61
NIPBL-205ENST00000505998 ALG2Q9H553 416 aa11.24□□□□□ -0.61
NIPBL-205ENST00000505998 NBPF20Q3BBV1 942 aa11.23□□□□□ -0.61
NIPBL-205ENST00000505998 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
NIPBL-205ENST00000505998 MPNDQ8N594 471 aa11.23□□□□□ -0.61
NIPBL-205ENST00000505998 CDK15Q96Q40 435 aa11.23□□□□□ -0.61
NIPBL-205ENST00000505998 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
NIPBL-205ENST00000505998 TTC24A2A3L6 582 aaPredicted RBP11.22□□□□□ -0.61
NIPBL-205ENST00000505998 SNIP1Q8TAD8 396 aaKnown RBP11.22□□□□□ -0.61
NIPBL-205ENST00000505998 ADAMTS19Q8TE59 1207 aa11.22□□□□□ -0.61
NIPBL-205ENST00000505998 ALDH1A1P00352 501 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 PRR20EP86478 221 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 PRR20CP86479 221 aa11.21□□□□□ -0.61
NIPBL-205ENST00000505998 PRR20DP86480 221 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms