RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 RIPK4P57078 832 aa20.4■□□□□ 0.86
DDX41-205ENST00000505081 NOB1Q9ULX3 412 aaKnown RBP20.4■□□□□ 0.86
DDX41-205ENST00000505081 MYO5BQ9ULV0 1848 aa20.39■□□□□ 0.86
DDX41-205ENST00000505081 DIP2CQ9Y2E4 1556 aa20.39■□□□□ 0.85
DDX41-205ENST00000505081 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
DDX41-205ENST00000505081 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
DDX41-205ENST00000505081 TBC1D2Q9BYX2 928 aa20.38■□□□□ 0.85
DDX41-205ENST00000505081 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
DDX41-205ENST00000505081 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
DDX41-205ENST00000505081 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
DDX41-205ENST00000505081 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
DDX41-205ENST00000505081 PTPRMP28827 1452 aa20.36■□□□□ 0.85
DDX41-205ENST00000505081 TMEM57Q8N5G2 664 aa20.36■□□□□ 0.85
DDX41-205ENST00000505081 ATF7IPQ6VMQ6 1270 aa20.36■□□□□ 0.85
DDX41-205ENST00000505081 TERF2IPQ9NYB0 399 aa20.36■□□□□ 0.85
DDX41-205ENST00000505081 CABP1Q9NZU7 370 aa20.35■□□□□ 0.85
DDX41-205ENST00000505081 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
DDX41-205ENST00000505081 ANTXR1Q9H6X2 564 aa20.35■□□□□ 0.85
DDX41-205ENST00000505081 DIAPH1O60610 1272 aaKnown RBP20.34■□□□□ 0.85
DDX41-205ENST00000505081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
DDX41-205ENST00000505081 CDK19Q9BWU1 502 aa20.34■□□□□ 0.85
DDX41-205ENST00000505081 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
DDX41-205ENST00000505081 SLC52A1Q9NWF4 448 aa20.34■□□□□ 0.85
DDX41-205ENST00000505081 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
DDX41-205ENST00000505081 CT47B1P0C2W7 299 aaPredicted RBP20.32■□□□□ 0.84
DDX41-205ENST00000505081 ANO8Q9HCE9 1232 aaPredicted RBP20.32■□□□□ 0.84
DDX41-205ENST00000505081 ARHGAP31Q2M1Z3 1444 aa20.32■□□□□ 0.84
DDX41-205ENST00000505081 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
DDX41-205ENST00000505081 DDX19BQ9UMR2 479 aa20.32■□□□□ 0.84
DDX41-205ENST00000505081 ZFYVE9O95405 1425 aa20.3■□□□□ 0.84
DDX41-205ENST00000505081 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
DDX41-205ENST00000505081 THUMPD2Q9BTF0 503 aaKnown RBP20.3■□□□□ 0.84
DDX41-205ENST00000505081 NEO1Q92859 1461 aa20.3■□□□□ 0.84
DDX41-205ENST00000505081 HDAC1Q13547 482 aaPredicted RBP20.3■□□□□ 0.84
DDX41-205ENST00000505081 WAPLQ7Z5K2 1190 aa20.3■□□□□ 0.84
DDX41-205ENST00000505081 TMEM131LA2VDJ0 1609 aa20.29■□□□□ 0.84
DDX41-205ENST00000505081 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
DDX41-205ENST00000505081 C22orf23Q9BZE7 217 aa20.29■□□□□ 0.84
DDX41-205ENST00000505081 ZMYM3Q14202 1370 aa20.28■□□□□ 0.84
DDX41-205ENST00000505081 HMOX1P09601 288 aa20.28■□□□□ 0.84
DDX41-205ENST00000505081 ZBTB40Q9NUA8 1239 aa20.28■□□□□ 0.84
DDX41-205ENST00000505081 STAG3Q9UJ98 1225 aa20.27■□□□□ 0.84
DDX41-205ENST00000505081 IL16Q14005 1332 aa20.27■□□□□ 0.84
DDX41-205ENST00000505081 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
DDX41-205ENST00000505081 SMC5Q8IY18 1101 aa20.26■□□□□ 0.83
DDX41-205ENST00000505081 PREX1Q8TCU6 1659 aa20.26■□□□□ 0.83
DDX41-205ENST00000505081 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
DDX41-205ENST00000505081 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
DDX41-205ENST00000505081 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
DDX41-205ENST00000505081 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
DDX41-205ENST00000505081 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
DDX41-205ENST00000505081 ANKRD26Q9UPS8 1709 aa20.25■□□□□ 0.83
DDX41-205ENST00000505081 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
DDX41-205ENST00000505081 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
DDX41-205ENST00000505081 C1orf115Q9H7X2 142 aa20.24■□□□□ 0.83
DDX41-205ENST00000505081 ARXQ96QS3 562 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 ARHGEF40Q8TER5 1519 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 ZRANB1Q9UGI0 708 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 ALKQ9UM73 1620 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 MED14O60244 1454 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
DDX41-205ENST00000505081 FCHSD2O94868 740 aa20.22■□□□□ 0.83
DDX41-205ENST00000505081 IPO8O15397 1037 aaKnown RBP20.22■□□□□ 0.83
DDX41-205ENST00000505081 CLTCQ00610 1675 aaKnown RBP20.21■□□□□ 0.83
DDX41-205ENST00000505081 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
DDX41-205ENST00000505081 NUCB1Q02818 461 aa20.19■□□□□ 0.82
DDX41-205ENST00000505081 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
DDX41-205ENST00000505081 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
DDX41-205ENST00000505081 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
DDX41-205ENST00000505081 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
DDX41-205ENST00000505081 ALDH1L2Q3SY69 923 aa20.18■□□□□ 0.82
DDX41-205ENST00000505081 NME9Q86XW9 330 aa20.18■□□□□ 0.82
DDX41-205ENST00000505081 VAMP4O75379 141 aa20.17■□□□□ 0.82
DDX41-205ENST00000505081 GZF1Q9H116 711 aaPredicted RBP20.17■□□□□ 0.82
DDX41-205ENST00000505081 CHD1LQ86WJ1 897 aa20.17■□□□□ 0.82
DDX41-205ENST00000505081 NFE2L2Q16236 605 aa20.16■□□□□ 0.82
DDX41-205ENST00000505081 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
DDX41-205ENST00000505081 MRPL50Q8N5N7 158 aaKnown RBP20.16■□□□□ 0.82
DDX41-205ENST00000505081 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
DDX41-205ENST00000505081 MCM4P33991 863 aa20.15■□□□□ 0.82
DDX41-205ENST00000505081 MLECQ14165 292 aa20.15■□□□□ 0.82
DDX41-205ENST00000505081 MAP2P11137 1827 aaKnown RBP20.14■□□□□ 0.82
DDX41-205ENST00000505081 FAM83GA6ND36 823 aa20.14■□□□□ 0.82
DDX41-205ENST00000505081 MBIPQ9NS73 344 aa20.14■□□□□ 0.82
DDX41-205ENST00000505081 PPIP5K1Q6PFW1 1433 aa20.14■□□□□ 0.81
DDX41-205ENST00000505081 RRS1Q15050 365 aaKnown RBP20.13■□□□□ 0.81
DDX41-205ENST00000505081 IL13P35225 146 aa20.13■□□□□ 0.81
DDX41-205ENST00000505081 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
DDX41-205ENST00000505081 HSCBQ8IWL3 235 aa20.12■□□□□ 0.81
DDX41-205ENST00000505081 CHMP5Q9NZZ3 219 aa20.12■□□□□ 0.81
DDX41-205ENST00000505081 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
DDX41-205ENST00000505081 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
DDX41-205ENST00000505081 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
DDX41-205ENST00000505081 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
DDX41-205ENST00000505081 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
DDX41-205ENST00000505081 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
DDX41-205ENST00000505081 GNAI1P63096 354 aa20.09■□□□□ 0.81
DDX41-205ENST00000505081 TWISTNBQ3B726 338 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms