RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 UNC5CLQ8IV45 518 aa36.25■■■■□ 3.39
PVT1-201ENST00000504719 ACEP12821 1306 aa36.25■■■■□ 3.39
PVT1-201ENST00000504719 TONSLQ96HA7 1378 aa36.25■■■■□ 3.39
PVT1-201ENST00000504719 CABP2Q9NPB3 220 aa36.23■■■■□ 3.39
PVT1-201ENST00000504719 PLCH1Q4KWH8 1693 aa36.23■■■■□ 3.39
PVT1-201ENST00000504719 CRYBG1Q9Y4K1 1723 aa36.22■■■■□ 3.39
PVT1-201ENST00000504719 NWD2Q9ULI1 1742 aa36.21■■■■□ 3.39
PVT1-201ENST00000504719 UPF1Q92900 1129 aaKnown RBP eCLIP36.2■■■■□ 3.39
PVT1-201ENST00000504719 GJD4Q96KN9 370 aaPredicted RBP36.19■■■■□ 3.38
PVT1-201ENST00000504719 PPIP5K1Q6PFW1 1433 aa36.18■■■■□ 3.38
PVT1-201ENST00000504719 FAM83GA6ND36 823 aa36.17■■■■□ 3.38
PVT1-201ENST00000504719 EVC2Q86UK5 1308 aa36.15■■■■□ 3.38
PVT1-201ENST00000504719 RALGAPBQ86X10 1494 aa36.12■■■■□ 3.37
PVT1-201ENST00000504719 GLI3P10071 1580 aa36.12■■■■□ 3.37
PVT1-201ENST00000504719 CARD11Q9BXL7 1154 aa36.11■■■■□ 3.37
PVT1-201ENST00000504719 COL14A1Q05707 1796 aaKnown RBP36.11■■■■□ 3.37
PVT1-201ENST00000504719 PHRF1Q9P1Y6 1649 aaKnown RBP36.09■■■■□ 3.37
PVT1-201ENST00000504719 VPS72Q15906 364 aa36.09■■■■□ 3.37
PVT1-201ENST00000504719 CABP1Q9NZU7 370 aa36.09■■■■□ 3.37
PVT1-201ENST00000504719 NRAPQ86VF7 1730 aa36.08■■■■□ 3.37
PVT1-201ENST00000504719 NUTM2GQ5VZR2 741 aa36.06■■■■□ 3.36
PVT1-201ENST00000504719 BRD4O60885 1362 aaPredicted RBP36.04■■■■□ 3.36
PVT1-201ENST00000504719 ABTB2Q8N961 1025 aa36.04■■■■□ 3.36
PVT1-201ENST00000504719 BTG4Q9NY30 223 aa36.04■■■■□ 3.36
PVT1-201ENST00000504719 SBNO2Q9Y2G9 1366 aa36.02■■■■□ 3.36
PVT1-201ENST00000504719 ATAD2Q6PL18 1390 aa36.02■■■■□ 3.36
PVT1-201ENST00000504719 USP6P35125 1406 aa36■■■■□ 3.35
PVT1-201ENST00000504719 PRDM11Q9NQV5 511 aa36■■■■□ 3.35
PVT1-201ENST00000504719 CCDC9Q9Y3X0 531 aaKnown RBP35.99■■■■□ 3.35
PVT1-201ENST00000504719 KIAA0232Q92628 1395 aa35.98■■■■□ 3.35
PVT1-201ENST00000504719 BRWD3Q6RI45 1802 aa35.97■■■■□ 3.35
PVT1-201ENST00000504719 USP19O94966 1318 aa35.96■■■■□ 3.35
PVT1-201ENST00000504719 NRKQ7Z2Y5 1582 aa35.96■■■■□ 3.35
PVT1-201ENST00000504719 AKAP12Q02952 1782 aa35.96■■■■□ 3.35
PVT1-201ENST00000504719 ONECUT3O60422 494 aaPredicted RBP35.95■■■■□ 3.35
PVT1-201ENST00000504719 NLRP13Q86W25 1043 aa35.95■■■■□ 3.35
PVT1-201ENST00000504719 SSH2Q76I76 1423 aa35.94■■■■□ 3.34
PVT1-201ENST00000504719 ZC3H6P61129 1189 aaKnown RBP35.94■■■■□ 3.34
PVT1-201ENST00000504719 CLSPNQ9HAW4 1339 aa35.92■■■■□ 3.34
PVT1-201ENST00000504719 CHRNA2Q15822 529 aa35.92■■■■□ 3.34
PVT1-201ENST00000504719 ZNF692Q9BU19 519 aaPredicted RBP35.92■■■■□ 3.34
PVT1-201ENST00000504719 SEPT12Q8IYM1 358 aa35.91■■■■□ 3.34
PVT1-201ENST00000504719 CCER1Q8TC90 406 aaPredicted RBP35.89■■■■□ 3.34
PVT1-201ENST00000504719 CPDO75976 1380 aa35.88■■■■□ 3.33
PVT1-201ENST00000504719 PIK3C2AO00443 1686 aa35.88■■■■□ 3.33
PVT1-201ENST00000504719 GCP02774 474 aa35.87■■■■□ 3.33
PVT1-201ENST00000504719 CPSF1Q10570 1443 aaKnown RBP35.87■■■■□ 3.33
PVT1-201ENST00000504719 SPATA31A5Q5VU36 1347 aa35.86■■■■□ 3.33
PVT1-201ENST00000504719 SPATA31A7Q8IWB4 1347 aa35.86■■■■□ 3.33
PVT1-201ENST00000504719 NLRP6P59044 892 aa35.85■■■■□ 3.33
PVT1-201ENST00000504719 TTC21BQ7Z4L5 1316 aa35.83■■■■□ 3.33
PVT1-201ENST00000504719 FAM98CQ17RN3 349 aaKnown RBP35.83■■■■□ 3.33
PVT1-201ENST00000504719 SLIT3O75094 1523 aa35.83■■■■□ 3.33
PVT1-201ENST00000504719 LMO7Q8WWI1 1683 aa35.82■■■■□ 3.33
PVT1-201ENST00000504719 MON2Q7Z3U7 1717 aa35.82■■■■□ 3.32
PVT1-201ENST00000504719 EP400Q96L91 3159 aa35.8■■■■□ 3.32
PVT1-201ENST00000504719 KTN1Q86UP2 1357 aaKnown RBP35.8■■■■□ 3.32
PVT1-201ENST00000504719 ST20-MTHFSA0A0A6YYL1 179 aa35.8■■■■□ 3.32
PVT1-201ENST00000504719 STRN4Q9NRL3 753 aa35.8■■■■□ 3.32
PVT1-201ENST00000504719 CAMTA1Q9Y6Y1 1673 aa35.8■■■■□ 3.32
PVT1-201ENST00000504719 PUS7Q96PZ0 661 aaKnown RBP35.79■■■■□ 3.32
PVT1-201ENST00000504719 TESK2Q96S53 571 aa35.79■■■■□ 3.32
PVT1-201ENST00000504719 TTC21AQ8NDW8 1320 aa35.79■■■■□ 3.32
PVT1-201ENST00000504719 TIMELESSQ9UNS1 1208 aa35.78■■■■□ 3.32
PVT1-201ENST00000504719 KRT27Q7Z3Y8 459 aa35.77■■■■□ 3.32
PVT1-201ENST00000504719 CCDC125Q86Z20 511 aa35.77■■■■□ 3.32
PVT1-201ENST00000504719 CD163L1Q9NR16 1453 aa35.77■■■■□ 3.32
PVT1-201ENST00000504719 SPATA31A1Q5TZJ5 1347 aa35.77■■■■□ 3.32
PVT1-201ENST00000504719 A0A0G2JS52 829 aa35.76■■■■□ 3.32
PVT1-201ENST00000504719 MYT1Q01538 1121 aa35.76■■■■□ 3.32
PVT1-201ENST00000504719 EVA1CP58658 441 aa35.75■■■■□ 3.31
PVT1-201ENST00000504719 TMC1Q8TDI8 760 aa35.75■■■■□ 3.31
PVT1-201ENST00000504719 THSD7AQ9UPZ6 1657 aa35.75■■■■□ 3.31
PVT1-201ENST00000504719 SLC12A5Q9H2X9 1139 aa35.73■■■■□ 3.31
PVT1-201ENST00000504719 SLC24A1O60721 1099 aa35.72■■■■□ 3.31
PVT1-201ENST00000504719 LARP1Q6PKG0 1096 aaKnown RBP35.69■■■■□ 3.3
PVT1-201ENST00000504719 COL18A1P39060 1754 aa35.69■■■■□ 3.3
PVT1-201ENST00000504719 AATKQ6ZMQ8 1374 aa35.68■■■■□ 3.3
PVT1-201ENST00000504719 USP47Q96K76 1375 aa35.68■■■■□ 3.3
PVT1-201ENST00000504719 HDGFL2Q7Z4V5 671 aaPredicted RBP35.68■■■■□ 3.3
PVT1-201ENST00000504719 COL5A2P05997 1499 aaPredicted RBP35.67■■■■□ 3.3
PVT1-201ENST00000504719 BLMP54132 1417 aaPredicted RBP35.67■■■■□ 3.3
PVT1-201ENST00000504719 ZBTB7CA1YPR0 619 aa35.67■■■■□ 3.3
PVT1-201ENST00000504719 KCNH5Q8NCM2 988 aa35.67■■■■□ 3.3
PVT1-201ENST00000504719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.66■■■■□ 3.3
PVT1-201ENST00000504719 USP35Q9P2H5 1018 aa35.65■■■■□ 3.3
PVT1-201ENST00000504719 USP54Q70EL1 1684 aa35.65■■■■□ 3.3
PVT1-201ENST00000504719 TERF2IPQ9NYB0 399 aa35.64■■■■□ 3.3
PVT1-201ENST00000504719 USP31Q70CQ4 1352 aa35.64■■■■□ 3.3
PVT1-201ENST00000504719 BARGINQ6ZT62 677 aa35.63■■■■□ 3.29
PVT1-201ENST00000504719 A0A1W2PP64 1363 aa35.63■■■■□ 3.29
PVT1-201ENST00000504719 ARHGEF25Q86VW2 580 aa35.62■■■■□ 3.29
PVT1-201ENST00000504719 ZRANB1Q9UGI0 708 aa35.62■■■■□ 3.29
PVT1-201ENST00000504719 EDC4Q6P2E9 1401 aaKnown RBP35.62■■■■□ 3.29
PVT1-201ENST00000504719 NINLQ9Y2I6 1382 aa35.62■■■■□ 3.29
PVT1-201ENST00000504719 NFAT5O94916 1531 aa35.61■■■■□ 3.29
PVT1-201ENST00000504719 TCP11L2Q8N4U5 519 aa35.6■■■■□ 3.29
PVT1-201ENST00000504719 RGPD5Q99666 1765 aa35.59■■■■□ 3.29
PVT1-201ENST00000504719 SOX12O15370 315 aa35.59■■■■□ 3.29
PVT1-201ENST00000504719 NME9Q86XW9 330 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms