RNA–Protein interactions for RNA: ENST00000504579.5

CANX-208, Transcript of calnexin, human

TSL 4

Gene CANX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CANX-208	ENST00000504579	RALGAPB	Q86X10	1494 aa		33.08	■■■□□ 2.89
CANX-208	ENST00000504579	SRPK2	P78362	688 aa	Known RBP	33.07	■■■□□ 2.88
CANX-208	ENST00000504579	NBPF8	Q3BBV2	869 aa		33.07	■■■□□ 2.88
CANX-208	ENST00000504579	ROCK2	O75116	1388 aa	Known RBP	33.07	■■■□□ 2.88
CANX-208	ENST00000504579	GLI3	P10071	1580 aa		33.05	■■■□□ 2.88
CANX-208	ENST00000504579	PLCH1	Q4KWH8	1693 aa		33.05	■■■□□ 2.88
CANX-208	ENST00000504579	QRICH2	Q9H0J4	1663 aa		33.05	■■■□□ 2.88
CANX-208	ENST00000504579	CABP2	Q9NPB3	220 aa		33.05	■■■□□ 2.88
CANX-208	ENST00000504579	ATAD2	Q6PL18	1390 aa		33.05	■■■□□ 2.88
CANX-208	ENST00000504579	VPS72	Q15906	364 aa		33.04	■■■□□ 2.88
CANX-208	ENST00000504579	NWD2	Q9ULI1	1742 aa		33.04	■■■□□ 2.88
CANX-208	ENST00000504579	PPIP5K1	Q6PFW1	1433 aa		33.02	■■■□□ 2.88
CANX-208	ENST00000504579	CRYBG1	Q9Y4K1	1723 aa		33.01	■■■□□ 2.87
CANX-208	ENST00000504579	BTG4	Q9NY30	223 aa		32.98	■■■□□ 2.87
CANX-208	ENST00000504579	NUTM2G	Q5VZR2	741 aa		32.96	■■■□□ 2.87
CANX-208	ENST00000504579	COL14A1	Q05707	1796 aa	Known RBP	32.96	■■■□□ 2.87
CANX-208	ENST00000504579	EP400	Q96L91	3159 aa		32.95	■■■□□ 2.87
CANX-208	ENST00000504579	CCDC9	Q9Y3X0	531 aa	Known RBP	32.95	■■■□□ 2.87
CANX-208	ENST00000504579	EVC2	Q86UK5	1308 aa		32.95	■■■□□ 2.86
CANX-208	ENST00000504579	NRAP	Q86VF7	1730 aa		32.94	■■■□□ 2.86
CANX-208	ENST00000504579	ONECUT3	O60422	494 aa	Predicted RBP	32.93	■■■□□ 2.86
CANX-208	ENST00000504579	CABP1	Q9NZU7	370 aa		32.93	■■■□□ 2.86
CANX-208	ENST00000504579	TONSL	Q96HA7	1378 aa		32.93	■■■□□ 2.86
CANX-208	ENST00000504579	PRDM11	Q9NQV5	511 aa		32.92	■■■□□ 2.86
CANX-208	ENST00000504579	SEPT12	Q8IYM1	358 aa		32.91	■■■□□ 2.86
CANX-208	ENST00000504579	ABTB2	Q8N961	1025 aa		32.91	■■■□□ 2.86
CANX-208	ENST00000504579	KIAA0232	Q92628	1395 aa		32.9	■■■□□ 2.86
CANX-208	ENST00000504579	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.89	■■■□□ 2.86
CANX-208	ENST00000504579	BRD4	O60885	1362 aa	Predicted RBP	32.87	■■■□□ 2.85
CANX-208	ENST00000504579	CARD11	Q9BXL7	1154 aa		32.86	■■■□□ 2.85
CANX-208	ENST00000504579	USP19	O94966	1318 aa		32.85	■■■□□ 2.85
CANX-208	ENST00000504579	ZC3H6	P61129	1189 aa	Known RBP	32.85	■■■□□ 2.85
CANX-208	ENST00000504579	USP6	P35125	1406 aa		32.85	■■■□□ 2.85
CANX-208	ENST00000504579	CHRNA2	Q15822	529 aa		32.84	■■■□□ 2.85
CANX-208	ENST00000504579	SPATA31A5	Q5VU36	1347 aa		32.82	■■■□□ 2.84
CANX-208	ENST00000504579	SPATA31A7	Q8IWB4	1347 aa		32.82	■■■□□ 2.84
CANX-208	ENST00000504579	NLRP13	Q86W25	1043 aa		32.82	■■■□□ 2.84
CANX-208	ENST00000504579	CCDC125	Q86Z20	511 aa		32.82	■■■□□ 2.84
CANX-208	ENST00000504579	NRK	Q7Z2Y5	1582 aa		32.82	■■■□□ 2.84
CANX-208	ENST00000504579	FAM98C	Q17RN3	349 aa	Known RBP	32.81	■■■□□ 2.84
CANX-208	ENST00000504579	BRWD3	Q6RI45	1802 aa		32.81	■■■□□ 2.84
CANX-208	ENST00000504579	SBNO2	Q9Y2G9	1366 aa		32.81	■■■□□ 2.84
CANX-208	ENST00000504579	SSH2	Q76I76	1423 aa		32.8	■■■□□ 2.84
CANX-208	ENST00000504579	CPD	O75976	1380 aa		32.78	■■■□□ 2.84
CANX-208	ENST00000504579	GC	P02774	474 aa		32.77	■■■□□ 2.84
CANX-208	ENST00000504579	KRT27	Q7Z3Y8	459 aa		32.77	■■■□□ 2.84
CANX-208	ENST00000504579		A0A0G2JS52	829 aa		32.75	■■■□□ 2.83
CANX-208	ENST00000504579	MYT1	Q01538	1121 aa		32.75	■■■□□ 2.83
CANX-208	ENST00000504579	ZNF692	Q9BU19	519 aa	Predicted RBP	32.75	■■■□□ 2.83
CANX-208	ENST00000504579	STRN4	Q9NRL3	753 aa		32.74	■■■□□ 2.83
CANX-208	ENST00000504579	SPATA31A1	Q5TZJ5	1347 aa		32.74	■■■□□ 2.83
CANX-208	ENST00000504579	NLRP6	P59044	892 aa		32.73	■■■□□ 2.83
CANX-208	ENST00000504579	BLM	P54132	1417 aa	Predicted RBP	32.72	■■■□□ 2.83
CANX-208	ENST00000504579	CAMTA1	Q9Y6Y1	1673 aa		32.71	■■■□□ 2.83
CANX-208	ENST00000504579	CPSF1	Q10570	1443 aa	Known RBP	32.7	■■■□□ 2.83
CANX-208	ENST00000504579	TTC21B	Q7Z4L5	1316 aa		32.7	■■■□□ 2.82
CANX-208	ENST00000504579	PIK3C2A	O00443	1686 aa		32.69	■■■□□ 2.82
CANX-208	ENST00000504579	LMO7	Q8WWI1	1683 aa		32.69	■■■□□ 2.82
CANX-208	ENST00000504579	SLIT3	O75094	1523 aa		32.68	■■■□□ 2.82
CANX-208	ENST00000504579	EVA1C	P58658	441 aa		32.68	■■■□□ 2.82
CANX-208	ENST00000504579	THSD7A	Q9UPZ6	1657 aa		32.68	■■■□□ 2.82
CANX-208	ENST00000504579	AKAP12	Q02952	1782 aa		32.67	■■■□□ 2.82
CANX-208	ENST00000504579	LARP1	Q6PKG0	1096 aa	Known RBP	32.64	■■■□□ 2.82
CANX-208	ENST00000504579	KTN1	Q86UP2	1357 aa	Known RBP	32.64	■■■□□ 2.82
CANX-208	ENST00000504579	TTC21A	Q8NDW8	1320 aa		32.64	■■■□□ 2.82
CANX-208	ENST00000504579	USP35	Q9P2H5	1018 aa		32.62	■■■□□ 2.81
CANX-208	ENST00000504579	COL5A2	P05997	1499 aa	Predicted RBP	32.61	■■■□□ 2.81
CANX-208	ENST00000504579	AATK	Q6ZMQ8	1374 aa		32.6	■■■□□ 2.81
CANX-208	ENST00000504579	BARGIN	Q6ZT62	677 aa		32.6	■■■□□ 2.81
CANX-208	ENST00000504579	CD163L1	Q9NR16	1453 aa		32.6	■■■□□ 2.81
CANX-208	ENST00000504579	SF3B2	Q13435	895 aa	Known RBP	32.59	■■■□□ 2.81
CANX-208	ENST00000504579	DEFB132	Q7Z7B7	95 aa		32.59	■■■□□ 2.81
CANX-208	ENST00000504579	TESK2	Q96S53	571 aa		32.59	■■■□□ 2.81
CANX-208	ENST00000504579	ST20-MTHFS	A0A0A6YYL1	179 aa		32.58	■■■□□ 2.81
CANX-208	ENST00000504579	ZBTB7C	A1YPR0	619 aa		32.58	■■■□□ 2.81
CANX-208	ENST00000504579	FAM182B	Q5T319	152 aa		32.58	■■■□□ 2.81
CANX-208	ENST00000504579	TMC1	Q8TDI8	760 aa		32.58	■■■□□ 2.81
CANX-208	ENST00000504579	PUS7	Q96PZ0	661 aa	Known RBP	32.58	■■■□□ 2.81
CANX-208	ENST00000504579	SLC12A5	Q9H2X9	1139 aa		32.57	■■■□□ 2.8
CANX-208	ENST00000504579	MON2	Q7Z3U7	1717 aa		32.57	■■■□□ 2.8
CANX-208	ENST00000504579	TCP11L2	Q8N4U5	519 aa		32.56	■■■□□ 2.8
CANX-208	ENST00000504579	KCNH5	Q8NCM2	988 aa		32.56	■■■□□ 2.8
CANX-208	ENST00000504579	ZRANB1	Q9UGI0	708 aa		32.55	■■■□□ 2.8
CANX-208	ENST00000504579	ARHGEF25	Q86VW2	580 aa		32.53	■■■□□ 2.8
CANX-208	ENST00000504579	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
CANX-208	ENST00000504579	THRAP3	Q9Y2W1	955 aa	Known RBP	32.53	■■■□□ 2.8
CANX-208	ENST00000504579	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.51	■■■□□ 2.79
CANX-208	ENST00000504579	AXIN2	Q9Y2T1	843 aa		32.51	■■■□□ 2.79
CANX-208	ENST00000504579	CRB1	P82279	1406 aa		32.51	■■■□□ 2.79
CANX-208	ENST00000504579	COL18A1	P39060	1754 aa		32.5	■■■□□ 2.79
CANX-208	ENST00000504579	USP31	Q70CQ4	1352 aa		32.5	■■■□□ 2.79
CANX-208	ENST00000504579	SOX12	O15370	315 aa		32.5	■■■□□ 2.79
CANX-208	ENST00000504579	PCGF6	Q9BYE7	350 aa		32.49	■■■□□ 2.79
CANX-208	ENST00000504579	TERF2IP	Q9NYB0	399 aa		32.49	■■■□□ 2.79
CANX-208	ENST00000504579	NFAT5	O94916	1531 aa		32.49	■■■□□ 2.79
CANX-208	ENST00000504579	SLC24A1	O60721	1099 aa		32.48	■■■□□ 2.79
CANX-208	ENST00000504579	NME9	Q86XW9	330 aa		32.48	■■■□□ 2.79
CANX-208	ENST00000504579		A0A1W2PP64	1363 aa		32.47	■■■□□ 2.79
CANX-208	ENST00000504579	CLSPN	Q9HAW4	1339 aa		32.47	■■■□□ 2.79
CANX-208	ENST00000504579	SRCAP	Q6ZRS2	3230 aa		32.46	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms