RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 PAK3O75914 559 aaPredicted RBP24.09■■□□□ 1.45
MATR3-208ENST00000504045 PHRF1Q9P1Y6 1649 aaKnown RBP24.08■■□□□ 1.45
MATR3-208ENST00000504045 SLIT2O94813 1529 aa24.08■■□□□ 1.45
MATR3-208ENST00000504045 CDK12Q9NYV4 1490 aaPredicted RBP24.08■■□□□ 1.45
MATR3-208ENST00000504045 ATRNO75882 1429 aa24.08■■□□□ 1.45
MATR3-208ENST00000504045 HAP1P54257 671 aaPredicted RBP24.08■■□□□ 1.45
MATR3-208ENST00000504045 NWD2Q9ULI1 1742 aa24.07■■□□□ 1.44
MATR3-208ENST00000504045 RGS12O14924 1447 aa24.07■■□□□ 1.44
MATR3-208ENST00000504045 RBM6P78332 1123 aaKnown RBP24.06■■□□□ 1.44
MATR3-208ENST00000504045 EVC2Q86UK5 1308 aa24.06■■□□□ 1.44
MATR3-208ENST00000504045 AKAP12Q02952 1782 aa24.05■■□□□ 1.44
MATR3-208ENST00000504045 TRPC5Q9UL62 973 aaPredicted RBP24.05■■□□□ 1.44
MATR3-208ENST00000504045 NRAPQ86VF7 1730 aa24.03■■□□□ 1.44
MATR3-208ENST00000504045 CABP1Q9NZU7 370 aa24.03■■□□□ 1.44
MATR3-208ENST00000504045 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
MATR3-208ENST00000504045 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
MATR3-208ENST00000504045 COL14A1Q05707 1796 aaKnown RBP24.01■■□□□ 1.43
MATR3-208ENST00000504045 GLI3P10071 1580 aa24.01■■□□□ 1.43
MATR3-208ENST00000504045 FAM83GA6ND36 823 aa23.99■■□□□ 1.43
MATR3-208ENST00000504045 UNC5CLQ8IV45 518 aa23.99■■□□□ 1.43
MATR3-208ENST00000504045 USP6P35125 1406 aa23.98■■□□□ 1.43
MATR3-208ENST00000504045 NRKQ7Z2Y5 1582 aa23.97■■□□□ 1.43
MATR3-208ENST00000504045 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
MATR3-208ENST00000504045 PIK3C2AO00443 1686 aa23.96■■□□□ 1.43
MATR3-208ENST00000504045 MON2Q7Z3U7 1717 aa23.96■■□□□ 1.43
MATR3-208ENST00000504045 BRWD3Q6RI45 1802 aa23.95■■□□□ 1.43
MATR3-208ENST00000504045 GJD4Q96KN9 370 aaPredicted RBP23.95■■□□□ 1.43
MATR3-208ENST00000504045 ABTB2Q8N961 1025 aa23.94■■□□□ 1.42
MATR3-208ENST00000504045 ATAD2Q6PL18 1390 aa23.93■■□□□ 1.42
MATR3-208ENST00000504045 SSH2Q76I76 1423 aa23.93■■□□□ 1.42
MATR3-208ENST00000504045 EP400Q96L91 3159 aa23.92■■□□□ 1.42
MATR3-208ENST00000504045 ST20-MTHFSA0A0A6YYL1 179 aa23.91■■□□□ 1.42
MATR3-208ENST00000504045 BTG4Q9NY30 223 aa23.91■■□□□ 1.42
MATR3-208ENST00000504045 BRD4O60885 1362 aaPredicted RBP23.91■■□□□ 1.42
MATR3-208ENST00000504045 KIAA0232Q92628 1395 aa23.91■■□□□ 1.42
MATR3-208ENST00000504045 TESK2Q96S53 571 aa23.9■■□□□ 1.42
MATR3-208ENST00000504045 USP19O94966 1318 aa23.9■■□□□ 1.42
MATR3-208ENST00000504045 PRDM11Q9NQV5 511 aa23.89■■□□□ 1.42
MATR3-208ENST00000504045 CPSF1Q10570 1443 aaKnown RBP23.89■■□□□ 1.42
MATR3-208ENST00000504045 ZC3H6P61129 1189 aaKnown RBP23.89■■□□□ 1.41
MATR3-208ENST00000504045 VPS72Q15906 364 aa23.89■■□□□ 1.41
MATR3-208ENST00000504045 UPF1Q92900 1129 aaKnown RBP eCLIP23.89■■□□□ 1.41
MATR3-208ENST00000504045 CD163L1Q9NR16 1453 aa23.89■■□□□ 1.41
MATR3-208ENST00000504045 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
MATR3-208ENST00000504045 CCER1Q8TC90 406 aaPredicted RBP23.88■■□□□ 1.41
MATR3-208ENST00000504045 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
MATR3-208ENST00000504045 USP47Q96K76 1375 aa23.87■■□□□ 1.41
MATR3-208ENST00000504045 LMO7Q8WWI1 1683 aa23.87■■□□□ 1.41
MATR3-208ENST00000504045 NLRP13Q86W25 1043 aa23.86■■□□□ 1.41
MATR3-208ENST00000504045 SLIT3O75094 1523 aa23.86■■□□□ 1.41
MATR3-208ENST00000504045 CCDC9Q9Y3X0 531 aaKnown RBP23.85■■□□□ 1.41
MATR3-208ENST00000504045 KTN1Q86UP2 1357 aaKnown RBP23.84■■□□□ 1.41
MATR3-208ENST00000504045 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
MATR3-208ENST00000504045 NLRP6P59044 892 aa23.84■■□□□ 1.41
MATR3-208ENST00000504045 ZNF692Q9BU19 519 aaPredicted RBP23.84■■□□□ 1.41
MATR3-208ENST00000504045 TMC1Q8TDI8 760 aa23.83■■□□□ 1.41
MATR3-208ENST00000504045 SLC12A5Q9H2X9 1139 aa23.83■■□□□ 1.41
MATR3-208ENST00000504045 CAMTA1Q9Y6Y1 1673 aa23.82■■□□□ 1.4
MATR3-208ENST00000504045 GCP02774 474 aa23.82■■□□□ 1.4
MATR3-208ENST00000504045 CPDO75976 1380 aa23.82■■□□□ 1.4
MATR3-208ENST00000504045 RGPD5Q99666 1765 aa23.81■■□□□ 1.4
MATR3-208ENST00000504045 USP54Q70EL1 1684 aa23.8■■□□□ 1.4
MATR3-208ENST00000504045 COL18A1P39060 1754 aa23.8■■□□□ 1.4
MATR3-208ENST00000504045 PUS7Q96PZ0 661 aaKnown RBP23.79■■□□□ 1.4
MATR3-208ENST00000504045 TTC21AQ8NDW8 1320 aa23.78■■□□□ 1.4
MATR3-208ENST00000504045 SEPT12Q8IYM1 358 aa23.78■■□□□ 1.4
MATR3-208ENST00000504045 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
MATR3-208ENST00000504045 SPATA31A5Q5VU36 1347 aa23.77■■□□□ 1.4
MATR3-208ENST00000504045 SPATA31A7Q8IWB4 1347 aa23.77■■□□□ 1.4
MATR3-208ENST00000504045 ONECUT3O60422 494 aaPredicted RBP23.77■■□□□ 1.4
MATR3-208ENST00000504045 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
MATR3-208ENST00000504045 THSD7AQ9UPZ6 1657 aa23.76■■□□□ 1.39
MATR3-208ENST00000504045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.394e-7■■■□□ 14.8
MATR3-208ENST00000504045 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
MATR3-208ENST00000504045 FAM98CQ17RN3 349 aaKnown RBP23.75■■□□□ 1.39
MATR3-208ENST00000504045 NFAT5O94916 1531 aa23.75■■□□□ 1.39
MATR3-208ENST00000504045 ZBTB7CA1YPR0 619 aa23.74■■□□□ 1.39
MATR3-208ENST00000504045 LTN1O94822 1766 aa23.74■■□□□ 1.39
MATR3-208ENST00000504045 HDGFL2Q7Z4V5 671 aaPredicted RBP23.74■■□□□ 1.39
MATR3-208ENST00000504045 EDC4Q6P2E9 1401 aaKnown RBP23.73■■□□□ 1.39
MATR3-208ENST00000504045 NME9Q86XW9 330 aa23.73■■□□□ 1.39
MATR3-208ENST00000504045 COL5A2P05997 1499 aaPredicted RBP23.73■■□□□ 1.39
MATR3-208ENST00000504045 MYOM1P52179 1685 aa23.73■■□□□ 1.39
MATR3-208ENST00000504045 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
MATR3-208ENST00000504045 SOX12O15370 315 aa23.72■■□□□ 1.39
MATR3-208ENST00000504045 TMF1P82094 1093 aa23.72■■□□□ 1.39
MATR3-208ENST00000504045 A0A0G2JS52 829 aa23.71■■□□□ 1.39
MATR3-208ENST00000504045 MYT1Q01538 1121 aa23.71■■□□□ 1.39
MATR3-208ENST00000504045 TERF2IPQ9NYB0 399 aa23.71■■□□□ 1.39
MATR3-208ENST00000504045 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
MATR3-208ENST00000504045 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
MATR3-208ENST00000504045 LARP1Q6PKG0 1096 aaKnown RBP23.7■■□□□ 1.38
MATR3-208ENST00000504045 USP31Q70CQ4 1352 aa23.7■■□□□ 1.38
MATR3-208ENST00000504045 EVA1CP58658 441 aa23.69■■□□□ 1.38
MATR3-208ENST00000504045 AATKQ6ZMQ8 1374 aa23.69■■□□□ 1.38
MATR3-208ENST00000504045 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
MATR3-208ENST00000504045 KRT27Q7Z3Y8 459 aa23.67■■□□□ 1.38
MATR3-208ENST00000504045 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
MATR3-208ENST00000504045 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
MATR3-208ENST00000504045 WNK3Q9BYP7 1800 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms