RNA–Protein interactions for RNA: ENST00000503585.5

PACRGL-208, Transcript of parkin coregulated like, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACRGL, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-208ENST00000503585 CABP1Q9NZU7 370 aa29.89■■■□□ 2.38
PACRGL-208ENST00000503585 PLCH1Q4KWH8 1693 aa29.88■■■□□ 2.37
PACRGL-208ENST00000503585 PHRF1Q9P1Y6 1649 aaKnown RBP29.88■■■□□ 2.37
PACRGL-208ENST00000503585 HAP1P54257 671 aaPredicted RBP29.87■■■□□ 2.37
PACRGL-208ENST00000503585 FNBP4Q8N3X1 1017 aaPredicted RBP29.86■■■□□ 2.37
PACRGL-208ENST00000503585 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.86■■■□□ 2.37
PACRGL-208ENST00000503585 ATAD2Q6PL18 1390 aa29.86■■■□□ 2.37
PACRGL-208ENST00000503585 USP21Q9UK80 565 aa29.85■■■□□ 2.37
PACRGL-208ENST00000503585 ST20-MTHFSA0A0A6YYL1 179 aa29.84■■■□□ 2.37
PACRGL-208ENST00000503585 USP47Q96K76 1375 aa29.84■■■□□ 2.37
PACRGL-208ENST00000503585 BCL9LQ86UU0 1499 aa29.84■■■□□ 2.37
PACRGL-208ENST00000503585 USP6P35125 1406 aa29.83■■■□□ 2.37
PACRGL-208ENST00000503585 SLIT2O94813 1529 aa29.83■■■□□ 2.37
PACRGL-208ENST00000503585 TESK2Q96S53 571 aa29.82■■■□□ 2.36
PACRGL-208ENST00000503585 NWD2Q9ULI1 1742 aa29.82■■■□□ 2.36
PACRGL-208ENST00000503585 QTRT2Q9H974 415 aaKnown RBP29.81■■■□□ 2.36
PACRGL-208ENST00000503585 NRKQ7Z2Y5 1582 aa29.81■■■□□ 2.36
PACRGL-208ENST00000503585 MON2Q7Z3U7 1717 aa29.8■■■□□ 2.36
PACRGL-208ENST00000503585 ATRNO75882 1429 aa29.79■■■□□ 2.36
PACRGL-208ENST00000503585 RXRBP28702 533 aa29.79■■■□□ 2.36
PACRGL-208ENST00000503585 NUTM2GQ5VZR2 741 aa29.79■■■□□ 2.36
PACRGL-208ENST00000503585 PIK3C2AO00443 1686 aa29.78■■■□□ 2.36
PACRGL-208ENST00000503585 BRD4O60885 1362 aaPredicted RBP29.77■■■□□ 2.36
PACRGL-208ENST00000503585 SSH2Q76I76 1423 aa29.77■■■□□ 2.36
PACRGL-208ENST00000503585 COL14A1Q05707 1796 aaKnown RBP29.77■■■□□ 2.36
PACRGL-208ENST00000503585 CDK12Q9NYV4 1490 aaPredicted RBP29.76■■■□□ 2.35
PACRGL-208ENST00000503585 NRAPQ86VF7 1730 aa29.76■■■□□ 2.35
PACRGL-208ENST00000503585 CPSF1Q10570 1443 aaKnown RBP29.75■■■□□ 2.35
PACRGL-208ENST00000503585 ABTB2Q8N961 1025 aa29.75■■■□□ 2.35
PACRGL-208ENST00000503585 TRPC5Q9UL62 973 aaPredicted RBP29.75■■■□□ 2.35
PACRGL-208ENST00000503585 RBM6P78332 1123 aaKnown RBP29.74■■■□□ 2.35
PACRGL-208ENST00000503585 CD163L1Q9NR16 1453 aa29.74■■■□□ 2.35
PACRGL-208ENST00000503585 RGS12O14924 1447 aa29.73■■■□□ 2.35
PACRGL-208ENST00000503585 FAM83GA6ND36 823 aa29.72■■■□□ 2.35
PACRGL-208ENST00000503585 USP19O94966 1318 aa29.71■■■□□ 2.35
PACRGL-208ENST00000503585 UNC5CLQ8IV45 518 aa29.71■■■□□ 2.35
PACRGL-208ENST00000503585 KTN1Q86UP2 1357 aaKnown RBP29.7■■■□□ 2.34
PACRGL-208ENST00000503585 ZNF692Q9BU19 519 aaPredicted RBP29.69■■■□□ 2.34
PACRGL-208ENST00000503585 GLI3P10071 1580 aa29.69■■■□□ 2.34
PACRGL-208ENST00000503585 TMC1Q8TDI8 760 aa29.69■■■□□ 2.34
PACRGL-208ENST00000503585 PUS7Q96PZ0 661 aaKnown RBP29.69■■■□□ 2.34
PACRGL-208ENST00000503585 KIAA0232Q92628 1395 aa29.67■■■□□ 2.34
PACRGL-208ENST00000503585 SLIT3O75094 1523 aa29.66■■■□□ 2.34
PACRGL-208ENST00000503585 TTC21BQ7Z4L5 1316 aa29.66■■■□□ 2.34
PACRGL-208ENST00000503585 NLRP13Q86W25 1043 aa29.66■■■□□ 2.34
PACRGL-208ENST00000503585 SLC12A5Q9H2X9 1139 aa29.66■■■□□ 2.34
PACRGL-208ENST00000503585 SLC24A1O60721 1099 aa29.65■■■□□ 2.34
PACRGL-208ENST00000503585 PRDM11Q9NQV5 511 aa29.65■■■□□ 2.34
PACRGL-208ENST00000503585 ZC3H6P61129 1189 aaKnown RBP29.64■■■□□ 2.33
PACRGL-208ENST00000503585 A0A1W2PP64 1363 aa29.64■■■□□ 2.33
PACRGL-208ENST00000503585 NLRP6P59044 892 aa29.63■■■□□ 2.33
PACRGL-208ENST00000503585 TMF1P82094 1093 aa29.63■■■□□ 2.33
PACRGL-208ENST00000503585 GJD4Q96KN9 370 aaPredicted RBP29.63■■■□□ 2.33
PACRGL-208ENST00000503585 BTG4Q9NY30 223 aa29.63■■■□□ 2.33
PACRGL-208ENST00000503585 TTC21AQ8NDW8 1320 aa29.62■■■□□ 2.33
PACRGL-208ENST00000503585 LMO7Q8WWI1 1683 aa29.61■■■□□ 2.33
PACRGL-208ENST00000503585 NINLQ9Y2I6 1382 aa29.61■■■□□ 2.33
PACRGL-208ENST00000503585 USP54Q70EL1 1684 aa29.61■■■□□ 2.33
PACRGL-208ENST00000503585 CHRNA2Q15822 529 aa29.6■■■□□ 2.33
PACRGL-208ENST00000503585 MYOM1P52179 1685 aa29.6■■■□□ 2.33
PACRGL-208ENST00000503585 GCP02774 474 aa29.6■■■□□ 2.33
PACRGL-208ENST00000503585 VPS72Q15906 364 aa29.6■■■□□ 2.33
PACRGL-208ENST00000503585 HDGFL2Q7Z4V5 671 aaPredicted RBP29.6■■■□□ 2.33
PACRGL-208ENST00000503585 CPDO75976 1380 aa29.59■■■□□ 2.33
PACRGL-208ENST00000503585 EDC4Q6P2E9 1401 aaKnown RBP29.58■■■□□ 2.33
PACRGL-208ENST00000503585 TERF2IPQ9NYB0 399 aa29.57■■■□□ 2.32
PACRGL-208ENST00000503585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.56■■■□□ 2.32
PACRGL-208ENST00000503585 EP400Q96L91 3159 aa29.55■■■□□ 2.32
PACRGL-208ENST00000503585 CCDC9Q9Y3X0 531 aaKnown RBP29.55■■■□□ 2.32
PACRGL-208ENST00000503585 CAMTA1Q9Y6Y1 1673 aa29.55■■■□□ 2.32
PACRGL-208ENST00000503585 BRWD3Q6RI45 1802 aa29.54■■■□□ 2.32
PACRGL-208ENST00000503585 NFAT5O94916 1531 aa29.53■■■□□ 2.32
PACRGL-208ENST00000503585 COL18A1P39060 1754 aa29.52■■■□□ 2.32
PACRGL-208ENST00000503585 ANKRD36BQ8N2N9 1353 aa29.52■■■□□ 2.32
PACRGL-208ENST00000503585 NME9Q86XW9 330 aa29.52■■■□□ 2.32
PACRGL-208ENST00000503585 ZRANB1Q9UGI0 708 aa29.52■■■□□ 2.32
PACRGL-208ENST00000503585 EIF4G2P78344 907 aaKnown RBP eCLIP29.51■■■□□ 2.31
PACRGL-208ENST00000503585 USP31Q70CQ4 1352 aa29.5■■■□□ 2.31
PACRGL-208ENST00000503585 HSPA5P11021 654 aaKnown RBP29.5■■■□□ 2.31
PACRGL-208ENST00000503585 CDCA8Q53HL2 280 aa29.5■■■□□ 2.31
PACRGL-208ENST00000503585 RGPD5Q99666 1765 aa29.48■■■□□ 2.31
PACRGL-208ENST00000503585 ZBTB7CA1YPR0 619 aa29.47■■■□□ 2.31
PACRGL-208ENST00000503585 SOX12O15370 315 aa29.47■■■□□ 2.31
PACRGL-208ENST00000503585 STRN4Q9NRL3 753 aa29.47■■■□□ 2.31
PACRGL-208ENST00000503585 SPATA31A5Q5VU36 1347 aa29.46■■■□□ 2.31
PACRGL-208ENST00000503585 SPATA31A7Q8IWB4 1347 aa29.46■■■□□ 2.31
PACRGL-208ENST00000503585 COL5A2P05997 1499 aaPredicted RBP29.46■■■□□ 2.31
PACRGL-208ENST00000503585 LTN1O94822 1766 aa29.46■■■□□ 2.31
PACRGL-208ENST00000503585 OVOS2A0A0J9YW53 1432 aa29.46■■■□□ 2.31
PACRGL-208ENST00000503585 OVOS2Q6IE36 1432 aa29.46■■■□□ 2.31
PACRGL-208ENST00000503585 KCNH5Q8NCM2 988 aa29.45■■■□□ 2.31
PACRGL-208ENST00000503585 AATKQ6ZMQ8 1374 aa29.44■■■□□ 2.3
PACRGL-208ENST00000503585 THSD7AQ9UPZ6 1657 aa29.44■■■□□ 2.3
PACRGL-208ENST00000503585 UPF1Q92900 1129 aaKnown RBP eCLIP29.43■■■□□ 2.3
PACRGL-208ENST00000503585 KIF20BQ96Q89 1820 aa29.43■■■□□ 2.3
PACRGL-208ENST00000503585 FAM98CQ17RN3 349 aaKnown RBP29.42■■■□□ 2.3
PACRGL-208ENST00000503585 SEPT12Q8IYM1 358 aa29.42■■■□□ 2.3
PACRGL-208ENST00000503585 ONECUT3O60422 494 aaPredicted RBP29.41■■■□□ 2.3
PACRGL-208ENST00000503585 ARHGEF25Q86VW2 580 aa29.41■■■□□ 2.3
PACRGL-208ENST00000503585 SPATA31A1Q5TZJ5 1347 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms