RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 NLRP13Q86W25 1043 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 USP6P35125 1406 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
TOPBP1-203ENST00000503464 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
TOPBP1-203ENST00000503464 LRRC7Q96NW7 1537 aa9.38□□□□□ -0.91
TOPBP1-203ENST00000503464 TMEM94Q12767 1356 aa9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 ACEP12821 1306 aa9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 FYB1O15117 783 aa9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 NCBP3Q53F19 620 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 HDGFL2Q7Z4V5 671 aaPredicted RBP9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 PNISRQ8TF01 805 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 MAP2P11137 1827 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-203ENST00000503464 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 ZNF335Q9H4Z2 1342 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 KIF1AQ12756 1690 aa9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 COL3A1P02461 1466 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 U3KPZ7 1027 aaPredicted RBP9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 MST1RQ04912 1400 aa9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 NCOA3Q9Y6Q9 1424 aa9.36□□□□□ -0.91
TOPBP1-203ENST00000503464 OVOS2A0A0J9YW53 1432 aa9.35□□□□□ -0.91
TOPBP1-203ENST00000503464 DCCP43146 1447 aa9.35□□□□□ -0.91
TOPBP1-203ENST00000503464 OVOS2Q6IE36 1432 aa9.35□□□□□ -0.91
TOPBP1-203ENST00000503464 NME9Q86XW9 330 aa9.35□□□□□ -0.91
TOPBP1-203ENST00000503464 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
TOPBP1-203ENST00000503464 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
TOPBP1-203ENST00000503464 BLMP54132 1417 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-203ENST00000503464 MORC1Q86VD1 984 aa9.34□□□□□ -0.91
TOPBP1-203ENST00000503464 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.91
TOPBP1-203ENST00000503464 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
TOPBP1-203ENST00000503464 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
TOPBP1-203ENST00000503464 PEAK1Q9H792 1746 aa9.34□□□□□ -0.92
TOPBP1-203ENST00000503464 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
TOPBP1-203ENST00000503464 SMG6Q86US8 1419 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-203ENST00000503464 LTBP4Q8N2S1 1624 aa9.33□□□□□ -0.92
TOPBP1-203ENST00000503464 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
TOPBP1-203ENST00000503464 TNNT2P45379 298 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-203ENST00000503464 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
TOPBP1-203ENST00000503464 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-203ENST00000503464 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
TOPBP1-203ENST00000503464 C14orf37Q86TY3 774 aa9.31□□□□□ -0.92
TOPBP1-203ENST00000503464 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
TOPBP1-203ENST00000503464 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
TOPBP1-203ENST00000503464 INSRP06213 1382 aa9.31□□□□□ -0.92
TOPBP1-203ENST00000503464 USP31Q70CQ4 1352 aa9.31□□□□□ -0.92
TOPBP1-203ENST00000503464 CRYBG1Q9Y4K1 1723 aa9.31□□□□□ -0.92
TOPBP1-203ENST00000503464 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
TOPBP1-203ENST00000503464 FBLN1P23142 703 aa9.3□□□□□ -0.92
TOPBP1-203ENST00000503464 MTHFSP49914 203 aa9.3□□□□□ -0.92
TOPBP1-203ENST00000503464 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
TOPBP1-203ENST00000503464 LTN1O94822 1766 aa9.29□□□□□ -0.92
TOPBP1-203ENST00000503464 CDK12Q9NYV4 1490 aaPredicted RBP9.29□□□□□ -0.92
TOPBP1-203ENST00000503464 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
TOPBP1-203ENST00000503464 HNRNPUQ00839 825 aaKnown RBP eCLIP9.29□□□□□ -0.92
TOPBP1-203ENST00000503464 NGDNQ8NEJ9 315 aaKnown RBP9.29□□□□□ -0.92
TOPBP1-203ENST00000503464 PXDNQ92626 1479 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 RGPD1P0DJD0 1748 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 MSH6P52701 1360 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 NFAT5O94916 1531 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 ESCO1Q5FWF5 840 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 RBM42Q9BTD8 480 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 ADAMTS8Q9UP79 889 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 IQSEC2Q5JU85 1478 aa9.28□□□□□ -0.92
TOPBP1-203ENST00000503464 PHRF1Q9P1Y6 1649 aaKnown RBP9.27□□□□□ -0.92
TOPBP1-203ENST00000503464 SLIT3O75094 1523 aa9.27□□□□□ -0.93
TOPBP1-203ENST00000503464 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
TOPBP1-203ENST00000503464 CENPBP07199 599 aaPredicted RBP9.27□□□□□ -0.93
TOPBP1-203ENST00000503464 POLKQ9UBT6 870 aa9.27□□□□□ -0.93
TOPBP1-203ENST00000503464 EMILIN1Q9Y6C2 1016 aa9.27□□□□□ -0.93
TOPBP1-203ENST00000503464 ZBED9Q6R2W3 1325 aa9.27□□□□□ -0.93
TOPBP1-203ENST00000503464 MED1Q15648 1581 aaPredicted RBP9.26□□□□□ -0.93
TOPBP1-203ENST00000503464 ATF3P18847 181 aa9.26□□□□□ -0.93
TOPBP1-203ENST00000503464 COG3Q96JB2 828 aa9.26□□□□□ -0.93
TOPBP1-203ENST00000503464 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
TOPBP1-203ENST00000503464 FOXO3O43524 673 aa9.25□□□□□ -0.93
TOPBP1-203ENST00000503464 XPCQ01831 940 aaPredicted RBP9.25□□□□□ -0.93
TOPBP1-203ENST00000503464 RRS1Q15050 365 aaKnown RBP9.25□□□□□ -0.93
TOPBP1-203ENST00000503464 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
TOPBP1-203ENST00000503464 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
TOPBP1-203ENST00000503464 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
TOPBP1-203ENST00000503464 RGPD5Q99666 1765 aa9.23□□□□□ -0.93
TOPBP1-203ENST00000503464 WDR43Q15061 677 aaKnown RBP eCLIP9.23□□□□□ -0.93
TOPBP1-203ENST00000503464 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
TOPBP1-203ENST00000503464 BRINP3Q76B58 766 aa9.23□□□□□ -0.93
TOPBP1-203ENST00000503464 MAP3K19Q56UN5 1328 aa9.23□□□□□ -0.93
TOPBP1-203ENST00000503464 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 NLRP6P59044 892 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 PSME1Q06323 249 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 KRT28Q7Z3Y7 464 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 CCDC146Q8IYE0 955 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 ABTB2Q8N961 1025 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 CFAP53Q96M91 514 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 USP19O94966 1318 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 SBNO1A3KN83 1393 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 COL18A1P39060 1754 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 TNS3Q68CZ2 1445 aa9.22□□□□□ -0.93
TOPBP1-203ENST00000503464 DLG5Q8TDM6 1919 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms