RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ROBO1Q9Y6N7 1651 aa27.87■■■□□ 2.05
CDC42SE2-206ENST00000503291 FYB1O15117 783 aa27.87■■■□□ 2.05
CDC42SE2-206ENST00000503291 PAK3O75914 559 aaPredicted RBP27.87■■■□□ 2.05
CDC42SE2-206ENST00000503291 CC2D1BQ5T0F9 858 aaKnown RBP27.87■■■□□ 2.05
CDC42SE2-206ENST00000503291 BRD4O60885 1362 aaPredicted RBP27.86■■■□□ 2.05
CDC42SE2-206ENST00000503291 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
CDC42SE2-206ENST00000503291 SCAF1Q9H7N4 1312 aaKnown RBP27.85■■■□□ 2.05
CDC42SE2-206ENST00000503291 NME9Q86XW9 330 aa27.84■■■□□ 2.05
CDC42SE2-206ENST00000503291 TTC21AQ8NDW8 1320 aa27.84■■■□□ 2.05
CDC42SE2-206ENST00000503291 NPC1L1Q9UHC9 1359 aa27.84■■■□□ 2.05
CDC42SE2-206ENST00000503291 GGNBP2Q9H3C7 697 aa27.83■■■□□ 2.05
CDC42SE2-206ENST00000503291 ANP32CO43423 234 aa27.82■■■□□ 2.04
CDC42SE2-206ENST00000503291 PXDNQ92626 1479 aa27.82■■■□□ 2.04
CDC42SE2-206ENST00000503291 SOS2Q07890 1332 aaPredicted RBP27.82■■■□□ 2.04
CDC42SE2-206ENST00000503291 NHSL1Q5SYE7 1610 aa27.8■■■□□ 2.04
CDC42SE2-206ENST00000503291 ABTB2Q8N961 1025 aa27.8■■■□□ 2.04
CDC42SE2-206ENST00000503291 ZRANB1Q9UGI0 708 aa27.8■■■□□ 2.04
CDC42SE2-206ENST00000503291 NSD2O96028 1365 aa27.79■■■□□ 2.04
CDC42SE2-206ENST00000503291 TRPM3Q9HCF6 1732 aaPredicted RBP27.79■■■□□ 2.04
CDC42SE2-206ENST00000503291 PRKRIP1Q9H875 184 aaPredicted RBP27.79■■■□□ 2.04
CDC42SE2-206ENST00000503291 SBNO1A3KN83 1393 aa27.78■■■□□ 2.04
CDC42SE2-206ENST00000503291 KIF20BQ96Q89 1820 aa27.77■■■□□ 2.04
CDC42SE2-206ENST00000503291 LMOD2Q6P5Q4 547 aa27.76■■■□□ 2.03
CDC42SE2-206ENST00000503291 NLRP6P59044 892 aa27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 MORC1Q86VD1 984 aa27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 AHDC1Q5TGY3 1603 aaPredicted RBP27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 SPATA31A3Q5VYP0 1347 aa27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 COG3Q96JB2 828 aa27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 PIK3C2AO00443 1686 aa27.75■■■□□ 2.03
CDC42SE2-206ENST00000503291 RALBP1Q15311 655 aa27.74■■■□□ 2.03
CDC42SE2-206ENST00000503291 PARD3Q8TEW0 1356 aa27.73■■■□□ 2.03
CDC42SE2-206ENST00000503291 USP31Q70CQ4 1352 aa27.73■■■□□ 2.03
CDC42SE2-206ENST00000503291 TNS3Q68CZ2 1445 aa27.72■■■□□ 2.03
CDC42SE2-206ENST00000503291 NLRP13Q86W25 1043 aa27.7■■■□□ 2.03
CDC42SE2-206ENST00000503291 MIER1Q8N108 512 aa27.7■■■□□ 2.03
CDC42SE2-206ENST00000503291 ALS2Q96Q42 1657 aa27.7■■■□□ 2.03
CDC42SE2-206ENST00000503291 OVOS2A0A0J9YW53 1432 aa27.7■■■□□ 2.02
CDC42SE2-206ENST00000503291 OVOS2Q6IE36 1432 aa27.7■■■□□ 2.02
CDC42SE2-206ENST00000503291 LRRC59Q96AG4 307 aaKnown RBP27.7■■■□□ 2.02
CDC42SE2-206ENST00000503291 ANKRD26Q9UPS8 1709 aa27.69■■■□□ 2.02
CDC42SE2-206ENST00000503291 TNNT2P45379 298 aaPredicted RBP27.69■■■□□ 2.02
CDC42SE2-206ENST00000503291 PHLPP1O60346 1717 aa27.68■■■□□ 2.02
CDC42SE2-206ENST00000503291 ARHGEF10O15013 1369 aa27.67■■■□□ 2.02
CDC42SE2-206ENST00000503291 PLEKHG5O94827 1062 aa27.65■■■□□ 2.02
CDC42SE2-206ENST00000503291 FBLN1P23142 703 aa27.64■■■□□ 2.02
CDC42SE2-206ENST00000503291 COL16A1Q07092 1604 aaPredicted RBP27.64■■■□□ 2.01
CDC42SE2-206ENST00000503291 MARF1Q9Y4F3 1742 aaKnown RBP27.63■■■□□ 2.01
CDC42SE2-206ENST00000503291 USP54Q70EL1 1684 aa27.63■■■□□ 2.01
CDC42SE2-206ENST00000503291 PPP2R1AP30153 589 aa27.63■■■□□ 2.01
CDC42SE2-206ENST00000503291 SOX12O15370 315 aa27.62■■■□□ 2.01
CDC42SE2-206ENST00000503291 MYBBP1AQ9BQG0 1328 aaKnown RBP27.62■■■□□ 2.01
CDC42SE2-206ENST00000503291 USP19O94966 1318 aa27.61■■■□□ 2.01
CDC42SE2-206ENST00000503291 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
CDC42SE2-206ENST00000503291 GCP02774 474 aa27.59■■■□□ 2.01
CDC42SE2-206ENST00000503291 KCNH5Q8NCM2 988 aa27.58■■■□□ 2.01
CDC42SE2-206ENST00000503291 MED1Q15648 1581 aaPredicted RBP27.57■■■□□ 2
CDC42SE2-206ENST00000503291 AATKQ6ZMQ8 1374 aa27.57■■■□□ 2
CDC42SE2-206ENST00000503291 HSPA1LP34931 641 aa27.57■■■□□ 2
CDC42SE2-206ENST00000503291 POLKQ9UBT6 870 aa27.56■■■□□ 2
CDC42SE2-206ENST00000503291 RRS1Q15050 365 aaKnown RBP27.55■■■□□ 2
CDC42SE2-206ENST00000503291 SLIT3O75094 1523 aa27.55■■■□□ 2
CDC42SE2-206ENST00000503291 PNPLA6Q8IY17 1366 aa27.55■■■□□ 2
CDC42SE2-206ENST00000503291 MTHFSP49914 203 aa27.55■■■□□ 2
CDC42SE2-206ENST00000503291 MAP2P11137 1827 aaKnown RBP27.54■■■□□ 2
CDC42SE2-206ENST00000503291 EMILIN1Q9Y6C2 1016 aa27.52■■■□□ 2
CDC42SE2-206ENST00000503291 NFAT5O94916 1531 aa27.51■■□□□ 1.99
CDC42SE2-206ENST00000503291 PPM1GO15355 546 aaPredicted RBP27.51■■□□□ 1.99
CDC42SE2-206ENST00000503291 CCDC184Q52MB2 194 aa27.51■■□□□ 1.99
CDC42SE2-206ENST00000503291 CRYBG1Q9Y4K1 1723 aa27.51■■□□□ 1.99
CDC42SE2-206ENST00000503291 CCER2I3L3R5 266 aa27.5■■□□□ 1.99
CDC42SE2-206ENST00000503291 PHRF1Q9P1Y6 1649 aaKnown RBP27.5■■□□□ 1.99
CDC42SE2-206ENST00000503291 MAP3K19Q56UN5 1328 aa27.5■■□□□ 1.99
CDC42SE2-206ENST00000503291 HAP1P54257 671 aaPredicted RBP27.5■■□□□ 1.99
CDC42SE2-206ENST00000503291 ZC3H6P61129 1189 aaKnown RBP27.49■■□□□ 1.99
CDC42SE2-206ENST00000503291 COL22A1Q8NFW1 1626 aaPredicted RBP27.49■■□□□ 1.99
CDC42SE2-206ENST00000503291 JCADQ9P266 1359 aa27.48■■□□□ 1.99
CDC42SE2-206ENST00000503291 FBXO41Q8TF61 875 aa27.48■■□□□ 1.99
CDC42SE2-206ENST00000503291 ARHGEF25Q86VW2 580 aa27.47■■□□□ 1.99
CDC42SE2-206ENST00000503291 MRS2Q9HD23 443 aa27.46■■□□□ 1.99
CDC42SE2-206ENST00000503291 ZBTB7CA1YPR0 619 aa27.45■■□□□ 1.99
CDC42SE2-206ENST00000503291 AMPHP49418 695 aa27.45■■□□□ 1.99
CDC42SE2-206ENST00000503291 SMG6Q86US8 1419 aaKnown RBP27.45■■□□□ 1.98
CDC42SE2-206ENST00000503291 ABCA3Q99758 1704 aa27.44■■□□□ 1.98
CDC42SE2-206ENST00000503291 SHPRHQ149N8 1683 aa27.44■■□□□ 1.98
CDC42SE2-206ENST00000503291 LTN1O94822 1766 aa27.43■■□□□ 1.98
CDC42SE2-206ENST00000503291 KIAA0232Q92628 1395 aa27.42■■□□□ 1.98
CDC42SE2-206ENST00000503291 CFAP53Q96M91 514 aa27.42■■□□□ 1.98
CDC42SE2-206ENST00000503291 CPDO75976 1380 aa27.41■■□□□ 1.98
CDC42SE2-206ENST00000503291 PEAK1Q9H792 1746 aa27.41■■□□□ 1.98
CDC42SE2-206ENST00000503291 KIF24Q5T7B8 1368 aa27.41■■□□□ 1.98
CDC42SE2-206ENST00000503291 NUTM2BA6NNL0 878 aaPredicted RBP27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 NUTM2EB1AL46 878 aaPredicted RBP27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 HOXC9P31274 260 aa27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 HSP90AB2PQ58FF8 381 aa27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 NUTM2AQ8IVF1 878 aaPredicted RBP27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 FLT4P35916 1363 aa27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 IP6K1Q92551 441 aa27.4■■□□□ 1.98
CDC42SE2-206ENST00000503291 CDK12Q9NYV4 1490 aaPredicted RBP27.39■■□□□ 1.98
CDC42SE2-206ENST00000503291 CHRNA2Q15822 529 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms