RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 NLRP1Q9C000 1473 aa9.43□□□□□ -0.9
PDGFC-203ENST00000502773 BECN1Q14457 450 aa9.43□□□□□ -0.9
PDGFC-203ENST00000502773 WASLO00401 505 aaPredicted RBP9.43□□□□□ -0.9
PDGFC-203ENST00000502773 NAP1L5Q96NT1 182 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-203ENST00000502773 SPATA31D1Q6ZQQ2 1576 aa9.42□□□□□ -0.9
PDGFC-203ENST00000502773 SAFB2Q14151 953 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDGFC-203ENST00000502773 GNAI1P63096 354 aa9.42□□□□□ -0.9
PDGFC-203ENST00000502773 DDX19BQ9UMR2 479 aa9.42□□□□□ -0.9
PDGFC-203ENST00000502773 MROH2AA6NES4 1674 aa9.42□□□□□ -0.9
PDGFC-203ENST00000502773 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
PDGFC-203ENST00000502773 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-203ENST00000502773 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
PDGFC-203ENST00000502773 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
PDGFC-203ENST00000502773 PDE4AP27815 886 aa9.41□□□□□ -0.9
PDGFC-203ENST00000502773 ALDH1L2Q3SY69 923 aa9.41□□□□□ -0.9
PDGFC-203ENST00000502773 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
PDGFC-203ENST00000502773 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
PDGFC-203ENST00000502773 TMEM131LA2VDJ0 1609 aa9.4□□□□□ -0.9
PDGFC-203ENST00000502773 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
PDGFC-203ENST00000502773 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
PDGFC-203ENST00000502773 USP35Q9P2H5 1018 aa9.4□□□□□ -0.9
PDGFC-203ENST00000502773 PLEKHH1Q9ULM0 1364 aa9.4□□□□□ -0.9
PDGFC-203ENST00000502773 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.91
PDGFC-203ENST00000502773 ALKQ9UM73 1620 aa9.4□□□□□ -0.91
PDGFC-203ENST00000502773 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.91
PDGFC-203ENST00000502773 ARXQ96QS3 562 aa9.39□□□□□ -0.91
PDGFC-203ENST00000502773 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
PDGFC-203ENST00000502773 AATKQ6ZMQ8 1374 aa9.39□□□□□ -0.91
PDGFC-203ENST00000502773 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
PDGFC-203ENST00000502773 FYB1O15117 783 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 RIPK4P57078 832 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 DZIP1LQ8IYY4 767 aaKnown RBP9.38□□□□□ -0.91
PDGFC-203ENST00000502773 MYOM1P52179 1685 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 TMPOP42166 694 aaKnown RBP9.38□□□□□ -0.91
PDGFC-203ENST00000502773 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 SMC4Q9NTJ3 1288 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 TMEM2Q9UHN6 1383 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 NUDT16Q96DE0 195 aaKnown RBP9.38□□□□□ -0.91
PDGFC-203ENST00000502773 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 BACH2Q9BYV9 841 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
PDGFC-203ENST00000502773 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
PDGFC-203ENST00000502773 API5Q9BZZ5 524 aaKnown RBP9.37□□□□□ -0.91
PDGFC-203ENST00000502773 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
PDGFC-203ENST00000502773 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
PDGFC-203ENST00000502773 ARHGEF28Q8N1W1 1705 aaKnown RBP9.37□□□□□ -0.91
PDGFC-203ENST00000502773 PTPRMP28827 1452 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 CFAP65Q6ZU64 1925 aaKnown RBP9.36□□□□□ -0.91
PDGFC-203ENST00000502773 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 ARHGAP45Q92619 1136 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 PIK3R4Q99570 1358 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 TECPR2O15040 1411 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 PLIN1O60240 522 aa9.36□□□□□ -0.91
PDGFC-203ENST00000502773 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
PDGFC-203ENST00000502773 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
PDGFC-203ENST00000502773 CLTCQ00610 1675 aaKnown RBP9.34□□□□□ -0.91
PDGFC-203ENST00000502773 PPIP5K1Q6PFW1 1433 aa9.34□□□□□ -0.91
PDGFC-203ENST00000502773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDGFC-203ENST00000502773 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-203ENST00000502773 PLEKHG3A1L390 1219 aa9.34□□□□□ -0.91
PDGFC-203ENST00000502773 HDAC5Q9UQL6 1122 aa9.34□□□□□ -0.91
PDGFC-203ENST00000502773 PNPLA6Q8IY17 1366 aa9.34□□□□□ -0.91
PDGFC-203ENST00000502773 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-203ENST00000502773 MVPQ14764 893 aaKnown RBP9.34□□□□□ -0.91
PDGFC-203ENST00000502773 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
PDGFC-203ENST00000502773 BRPF1P55201 1214 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-203ENST00000502773 KIF24Q5T7B8 1368 aa9.33□□□□□ -0.92
PDGFC-203ENST00000502773 ATF7IPQ6VMQ6 1270 aa9.32□□□□□ -0.92
PDGFC-203ENST00000502773 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
PDGFC-203ENST00000502773 ZMYND15Q9H091 742 aa9.32□□□□□ -0.92
PDGFC-203ENST00000502773 RRP7AQ9Y3A4 280 aaKnown RBP9.32□□□□□ -0.92
PDGFC-203ENST00000502773 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
PDGFC-203ENST00000502773 CDK11BP21127 795 aaKnown RBP9.31□□□□□ -0.92
PDGFC-203ENST00000502773 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 LAS1LQ9Y4W2 734 aaKnown RBP9.31□□□□□ -0.92
PDGFC-203ENST00000502773 HTATSF1O43719 755 aaKnown RBP9.31□□□□□ -0.92
PDGFC-203ENST00000502773 COG6Q9Y2V7 657 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 CDK12Q9NYV4 1490 aaPredicted RBP9.31□□□□□ -0.92
PDGFC-203ENST00000502773 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 CASC1Q6TDU7 716 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 ANKLE2Q86XL3 938 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 GCC1Q96CN9 775 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 TSPOAP1O95153 1857 aa9.31□□□□□ -0.92
PDGFC-203ENST00000502773 HSP90AA1P07900 732 aaKnown RBP9.31□□□□□ -0.92
PDGFC-203ENST00000502773 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
PDGFC-203ENST00000502773 SIGLEC1Q9BZZ2 1709 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 DIP2AQ14689 1571 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 BCAR3O75815 825 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 WAPLQ7Z5K2 1190 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 HMMRO75330 724 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 RGS3P49796 1198 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 RSPH6AQ9H0K4 717 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 EXOSC9Q06265 439 aaKnown RBP9.3□□□□□ -0.92
PDGFC-203ENST00000502773 HDAC1Q13547 482 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-203ENST00000502773 BABAM1Q9NWV8 329 aa9.3□□□□□ -0.92
PDGFC-203ENST00000502773 AMPHP49418 695 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms