RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 PLEKHG3A1L390 1219 aa28.38■■■□□ 2.13
SFXN1-203ENST00000502393 NEUROD1Q13562 356 aa28.37■■■□□ 2.13
SFXN1-203ENST00000502393 TOPAZ1Q8N9V7 1692 aa28.37■■■□□ 2.13
SFXN1-203ENST00000502393 NBPF8Q3BBV2 869 aa28.36■■■□□ 2.13
SFXN1-203ENST00000502393 ACEP12821 1306 aa28.36■■■□□ 2.13
SFXN1-203ENST00000502393 CCDC9Q9Y3X0 531 aaKnown RBP28.35■■■□□ 2.13
SFXN1-203ENST00000502393 EP400Q96L91 3159 aa28.35■■■□□ 2.13
SFXN1-203ENST00000502393 SRPK2P78362 688 aaKnown RBP28.34■■■□□ 2.13
SFXN1-203ENST00000502393 BTG4Q9NY30 223 aa28.34■■■□□ 2.13
SFXN1-203ENST00000502393 ONECUT3O60422 494 aaPredicted RBP28.33■■■□□ 2.13
SFXN1-203ENST00000502393 CCDC125Q86Z20 511 aa28.33■■■□□ 2.13
SFXN1-203ENST00000502393 CRYBG1Q9Y4K1 1723 aa28.32■■■□□ 2.12
SFXN1-203ENST00000502393 COL14A1Q05707 1796 aaKnown RBP28.32■■■□□ 2.12
SFXN1-203ENST00000502393 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
SFXN1-203ENST00000502393 TRPM1Q7Z4N2 1603 aa28.31■■■□□ 2.12
SFXN1-203ENST00000502393 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
SFXN1-203ENST00000502393 CABP2Q9NPB3 220 aa28.29■■■□□ 2.12
SFXN1-203ENST00000502393 NRAPQ86VF7 1730 aa28.29■■■□□ 2.12
SFXN1-203ENST00000502393 PPIP5K1Q6PFW1 1433 aa28.28■■■□□ 2.12
SFXN1-203ENST00000502393 PRDM11Q9NQV5 511 aa28.28■■■□□ 2.12
SFXN1-203ENST00000502393 ROCK2O75116 1388 aaKnown RBP28.27■■■□□ 2.12
SFXN1-203ENST00000502393 NUTM2GQ5VZR2 741 aa28.24■■■□□ 2.11
SFXN1-203ENST00000502393 ABTB2Q8N961 1025 aa28.24■■■□□ 2.11
SFXN1-203ENST00000502393 BRWD3Q6RI45 1802 aa28.24■■■□□ 2.11
SFXN1-203ENST00000502393 KIAA0232Q92628 1395 aa28.24■■■□□ 2.11
SFXN1-203ENST00000502393 PHRF1Q9P1Y6 1649 aaKnown RBP28.23■■■□□ 2.11
SFXN1-203ENST00000502393 BRD4O60885 1362 aaPredicted RBP28.23■■■□□ 2.11
SFXN1-203ENST00000502393 EVC2Q86UK5 1308 aa28.22■■■□□ 2.11
SFXN1-203ENST00000502393 FAM98CQ17RN3 349 aaKnown RBP28.21■■■□□ 2.11
SFXN1-203ENST00000502393 KRT27Q7Z3Y8 459 aa28.21■■■□□ 2.11
SFXN1-203ENST00000502393 CABP1Q9NZU7 370 aa28.21■■■□□ 2.11
SFXN1-203ENST00000502393 SPATA31A5Q5VU36 1347 aa28.2■■■□□ 2.11
SFXN1-203ENST00000502393 SPATA31A7Q8IWB4 1347 aa28.2■■■□□ 2.11
SFXN1-203ENST00000502393 ZC3H6P61129 1189 aaKnown RBP28.2■■■□□ 2.1
SFXN1-203ENST00000502393 BLMP54132 1417 aaPredicted RBP28.19■■■□□ 2.1
SFXN1-203ENST00000502393 A0A0G2JS52 829 aa28.18■■■□□ 2.1
SFXN1-203ENST00000502393 MYT1Q01538 1121 aa28.18■■■□□ 2.1
SFXN1-203ENST00000502393 CHRNA2Q15822 529 aa28.18■■■□□ 2.1
SFXN1-203ENST00000502393 NLRP13Q86W25 1043 aa28.18■■■□□ 2.1
SFXN1-203ENST00000502393 USP19O94966 1318 aa28.17■■■□□ 2.1
SFXN1-203ENST00000502393 USP6P35125 1406 aa28.15■■■□□ 2.1
SFXN1-203ENST00000502393 CPDO75976 1380 aa28.14■■■□□ 2.1
SFXN1-203ENST00000502393 NRKQ7Z2Y5 1582 aa28.14■■■□□ 2.1
SFXN1-203ENST00000502393 GCP02774 474 aa28.13■■■□□ 2.09
SFXN1-203ENST00000502393 TRIM26Q12899 539 aaPredicted RBP28.13■■■□□ 2.09
SFXN1-203ENST00000502393 SF3B2Q13435 895 aaKnown RBP28.13■■■□□ 2.09
SFXN1-203ENST00000502393 STRN4Q9NRL3 753 aa28.12■■■□□ 2.09
SFXN1-203ENST00000502393 SPATA31A1Q5TZJ5 1347 aa28.12■■■□□ 2.09
SFXN1-203ENST00000502393 TONSLQ96HA7 1378 aa28.11■■■□□ 2.09
SFXN1-203ENST00000502393 ZRANB1Q9UGI0 708 aa28.11■■■□□ 2.09
SFXN1-203ENST00000502393 EVA1CP58658 441 aa28.09■■■□□ 2.09
SFXN1-203ENST00000502393 ZNF692Q9BU19 519 aaPredicted RBP28.09■■■□□ 2.09
SFXN1-203ENST00000502393 CARD11Q9BXL7 1154 aa28.09■■■□□ 2.09
SFXN1-203ENST00000502393 SSH2Q76I76 1423 aa28.09■■■□□ 2.09
SFXN1-203ENST00000502393 NLRP6P59044 892 aa28.08■■■□□ 2.09
SFXN1-203ENST00000502393 THSD7AQ9UPZ6 1657 aa28.07■■■□□ 2.08
SFXN1-203ENST00000502393 SBNO2Q9Y2G9 1366 aa28.07■■■□□ 2.08
SFXN1-203ENST00000502393 CAMTA1Q9Y6Y1 1673 aa28.06■■■□□ 2.08
SFXN1-203ENST00000502393 LMO7Q8WWI1 1683 aa28.05■■■□□ 2.08
SFXN1-203ENST00000502393 DEFB132Q7Z7B7 95 aa28.04■■■□□ 2.08
SFXN1-203ENST00000502393 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
SFXN1-203ENST00000502393 SLIT3O75094 1523 aa28.02■■■□□ 2.08
SFXN1-203ENST00000502393 TTC21BQ7Z4L5 1316 aa28.01■■■□□ 2.07
SFXN1-203ENST00000502393 LARP1Q6PKG0 1096 aaKnown RBP28.01■■■□□ 2.07
SFXN1-203ENST00000502393 USP35Q9P2H5 1018 aa28.01■■■□□ 2.07
SFXN1-203ENST00000502393 CPSF1Q10570 1443 aaKnown RBP28.01■■■□□ 2.07
SFXN1-203ENST00000502393 PIK3C2AO00443 1686 aa28■■■□□ 2.07
SFXN1-203ENST00000502393 AKAP12Q02952 1782 aa27.99■■■□□ 2.07
SFXN1-203ENST00000502393 TTC21AQ8NDW8 1320 aa27.99■■■□□ 2.07
SFXN1-203ENST00000502393 BAG6P46379 1132 aa27.98■■■□□ 2.07
SFXN1-203ENST00000502393 FAM182BQ5T319 152 aa27.98■■■□□ 2.07
SFXN1-203ENST00000502393 TCP11L2Q8N4U5 519 aa27.98■■■□□ 2.07
SFXN1-203ENST00000502393 THRAP3Q9Y2W1 955 aaKnown RBP27.98■■■□□ 2.07
SFXN1-203ENST00000502393 AATKQ6ZMQ8 1374 aa27.98■■■□□ 2.07
SFXN1-203ENST00000502393 COL5A2P05997 1499 aaPredicted RBP27.97■■■□□ 2.07
SFXN1-203ENST00000502393 KTN1Q86UP2 1357 aaKnown RBP27.97■■■□□ 2.07
SFXN1-203ENST00000502393 SRCAPQ6ZRS2 3230 aa27.96■■■□□ 2.07
SFXN1-203ENST00000502393 KCNH5Q8NCM2 988 aa27.95■■■□□ 2.06
SFXN1-203ENST00000502393 ZBTB7CA1YPR0 619 aa27.94■■■□□ 2.06
SFXN1-203ENST00000502393 FAM196AQ6ZSG2 479 aa27.94■■■□□ 2.06
SFXN1-203ENST00000502393 RGPD1P0DJD0 1748 aa27.93■■■□□ 2.06
SFXN1-203ENST00000502393 CRB1P82279 1406 aa27.92■■■□□ 2.06
SFXN1-203ENST00000502393 PDE3BQ13370 1112 aa27.92■■■□□ 2.06
SFXN1-203ENST00000502393 PUS7Q96PZ0 661 aaKnown RBP27.91■■■□□ 2.06
SFXN1-203ENST00000502393 ARHGEF25Q86VW2 580 aa27.9■■■□□ 2.06
SFXN1-203ENST00000502393 TMC1Q8TDI8 760 aa27.89■■■□□ 2.06
SFXN1-203ENST00000502393 MON2Q7Z3U7 1717 aa27.89■■■□□ 2.05
SFXN1-203ENST00000502393 DISP2A7MBM2 1401 aa27.88■■■□□ 2.05
SFXN1-203ENST00000502393 COL18A1P39060 1754 aa27.88■■■□□ 2.05
SFXN1-203ENST00000502393 EN1Q05925 392 aaPredicted RBP27.87■■■□□ 2.05
SFXN1-203ENST00000502393 AXIN2Q9Y2T1 843 aa27.87■■■□□ 2.05
SFXN1-203ENST00000502393 CD163L1Q9NR16 1453 aa27.87■■■□□ 2.05
SFXN1-203ENST00000502393 SLC24A1O60721 1099 aa27.86■■■□□ 2.05
SFXN1-203ENST00000502393 HDGFL2Q7Z4V5 671 aaPredicted RBP27.86■■■□□ 2.05
SFXN1-203ENST00000502393 SLC12A5Q9H2X9 1139 aa27.86■■■□□ 2.05
SFXN1-203ENST00000502393 TRIM37O94972 964 aa27.85■■■□□ 2.05
SFXN1-203ENST00000502393 TOM1L2Q6ZVM7 507 aa27.85■■■□□ 2.05
SFXN1-203ENST00000502393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.85■■■□□ 2.05
SFXN1-203ENST00000502393 TNS1Q9HBL0 1735 aaKnown RBP27.84■■■□□ 2.05
SFXN1-203ENST00000502393 SOX12O15370 315 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms