RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 EIF4G1Q04637 1599 aaKnown RBP6.51□□□□□ -1.37
HMGB1P21-201ENST00000502313 ACTN4O43707 911 aaKnown RBP6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 CSB-PGBD3P0DP91 1061 aa6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 RFX1P22670 979 aa6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 PPP4CP60510 307 aa6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 EIF4G2P78344 907 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 PUS10Q3MIT2 529 aaKnown RBP6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 PBXIP1Q96AQ6 731 aa6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 IVNS1ABPQ9Y6Y0 642 aa6.5□□□□□ -1.37
HMGB1P21-201ENST00000502313 NR1I2O75469 434 aa6.49□□□□□ -1.37
HMGB1P21-201ENST00000502313 SYMPKQ92797 1274 aaKnown RBP6.49□□□□□ -1.37
HMGB1P21-201ENST00000502313 TRIM34Q9BYJ4 488 aa6.49□□□□□ -1.37
HMGB1P21-201ENST00000502313 NR6A1Q15406 480 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 MORN1Q5T089 497 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 ADGRD1Q6QNK2 874 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 IGSF5Q9NSI5 407 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 HPS5Q9UPZ3 1129 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 PCDHB3Q9Y5E6 796 aa6.48□□□□□ -1.37
HMGB1P21-201ENST00000502313 FMNL1O95466 1100 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 LSM11P83369 360 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 DESI1Q6ICB0 168 aa6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 POTEEQ6S8J3 1075 aa6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 SND1Q7KZF4 910 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 ZNF592Q92610 1267 aa6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 USB1Q9BQ65 265 aaKnown RBP6.47□□□□□ -1.37
HMGB1P21-201ENST00000502313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P21-201ENST00000502313 CTHP32929 405 aa6.46□□□□□ -1.38
HMGB1P21-201ENST00000502313 CC2D2AQ9P2K1 1620 aa6.46□□□□□ -1.38
HMGB1P21-201ENST00000502313 LMOD1P29536 600 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P21-201ENST00000502313 ANKRD13DQ6ZTN6 518 aa6.45□□□□□ -1.38
HMGB1P21-201ENST00000502313 POLR3GLQ9BT43 218 aa6.45□□□□□ -1.38
HMGB1P21-201ENST00000502313 PPP1R12CQ9BZL4 782 aa6.45□□□□□ -1.38
HMGB1P21-201ENST00000502313 TSR3Q9UJK0 312 aaKnown RBP6.45□□□□□ -1.38
HMGB1P21-201ENST00000502313 BHMG1C9JSJ3 638 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P21-201ENST00000502313 PPM1GO15355 546 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P21-201ENST00000502313 PER1O15534 1290 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P21-201ENST00000502313 EPS8L1Q8TE68 723 aa6.44□□□□□ -1.38
HMGB1P21-201ENST00000502313 WNT2BQ93097 391 aa6.44□□□□□ -1.38
HMGB1P21-201ENST00000502313 USTQ9Y2C2 406 aa6.44□□□□□ -1.38
HMGB1P21-201ENST00000502313 PALM3A6NDB9 673 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 SOWAHBA6NEL2 793 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 ZBBXA8MT70 800 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 NR1H3Q13133 447 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 LYPD8Q6UX82 237 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 RNF19BQ6ZMZ0 732 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 CCDC125Q86Z20 511 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 DHX37Q8IY37 1157 aaKnown RBP6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 ARMC2Q8NEN0 867 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 FKBPLQ9UIM3 349 aa6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 ZC3H4Q9UPT8 1303 aaKnown RBP6.43□□□□□ -1.38
HMGB1P21-201ENST00000502313 JUNDP17535 347 aa6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 BCAMP50895 628 aa6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 PTPRNQ16849 979 aa6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 BLOC1S3Q6QNY0 202 aa6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 ADAMTS19Q8TE59 1207 aa6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 ALG2Q9H553 416 aa6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 KIAA1522Q9P206 1035 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 SALL2Q9Y467 1007 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P21-201ENST00000502313 CECR2Q9BXF3 1484 aa6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 RBM47A0AV96 593 aaKnown RBP6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 SRPK2P78362 688 aaKnown RBP6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 NBPF14Q5TI25 921 aa6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 B4GALNT3Q6L9W6 998 aa6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 TFIP11Q9UBB9 837 aaKnown RBP6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 NCAPD3P42695 1498 aa6.41□□□□□ -1.38
HMGB1P21-201ENST00000502313 CCNYL3P0C7X3 344 aa6.4□□□□□ -1.38
HMGB1P21-201ENST00000502313 APLP1P51693 650 aa6.4□□□□□ -1.38
HMGB1P21-201ENST00000502313 CFAP70Q5T0N1 1121 aa6.4□□□□□ -1.38
HMGB1P21-201ENST00000502313 BRICD5Q6PL45 260 aa6.4□□□□□ -1.38
HMGB1P21-201ENST00000502313 SCUBE3Q8IX30 993 aa6.4□□□□□ -1.38
HMGB1P21-201ENST00000502313 VRTNQ9H8Y1 702 aa6.4□□□□□ -1.38
HMGB1P21-201ENST00000502313 ATP9BO43861 1147 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 GPR37L1O60883 481 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 FBXO45P0C2W1 286 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 PTK2Q05397 1052 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 MRRFQ96E11 262 aaKnown RBP6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 SPSB2Q99619 263 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 MAFBQ9Y5Q3 323 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 PEG3Q9GZU2 1588 aa6.39□□□□□ -1.39
HMGB1P21-201ENST00000502313 COPS2P61201 443 aa6.38□□□□□ -1.39
HMGB1P21-201ENST00000502313 NUDT12Q9BQG2 462 aa6.38□□□□□ -1.39
HMGB1P21-201ENST00000502313 MAP10Q9P2G4 905 aa6.38□□□□□ -1.39
HMGB1P21-201ENST00000502313 PCDHB9Q9Y5E1 797 aa6.38□□□□□ -1.39
HMGB1P21-201ENST00000502313 HRO43593 1189 aa6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 SMARCA5O60264 1052 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 SKIP12755 728 aa6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 MCCD1P59942 119 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 MSS51Q4VC12 460 aa6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 CDCA8Q53HL2 280 aa6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 GPKOWQ92917 476 aaPredicted RBP eCLIP6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 UCN2Q96RP3 112 aa6.37□□□□□ -1.39
HMGB1P21-201ENST00000502313 ATAD2BQ9ULI0 1458 aa6.36□□□□□ -1.39
HMGB1P21-201ENST00000502313 TBC1D9Q6ZT07 1266 aa6.36□□□□□ -1.39
HMGB1P21-201ENST00000502313 TXNDC2Q86VQ3 553 aa6.36□□□□□ -1.39
HMGB1P21-201ENST00000502313 CCDC24Q8N4L8 307 aa6.36□□□□□ -1.39
HMGB1P21-201ENST00000502313 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
HMGB1P21-201ENST00000502313 CWC22Q9HCG8 908 aaKnown RBP6.36□□□□□ -1.39
HMGB1P21-201ENST00000502313 GPSM3Q9Y4H4 160 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms