RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
FN1-227ENST00000498719 NAP1L5Q96NT1 182 aaPredicted RBP11.59□□□□□ -0.55
FN1-227ENST00000498719 SKAP1Q86WV1 359 aa11.59□□□□□ -0.55
FN1-227ENST00000498719 NOP58Q9Y2X3 529 aaKnown RBP11.59□□□□□ -0.55
FN1-227ENST00000498719 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
FN1-227ENST00000498719 RTEL1-TNFRSF6BF6WH68 1400 aa11.59□□□□□ -0.55
FN1-227ENST00000498719 PTPRTO14522 1441 aa11.59□□□□□ -0.55
FN1-227ENST00000498719 GOPCQ9HD26 462 aa11.58□□□□□ -0.56
FN1-227ENST00000498719 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
FN1-227ENST00000498719 FANCAO15360 1455 aa11.58□□□□□ -0.56
FN1-227ENST00000498719 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
FN1-227ENST00000498719 ATP7AQ04656 1500 aa11.58□□□□□ -0.56
FN1-227ENST00000498719 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
FN1-227ENST00000498719 TET3O43151 1660 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 GIMAP6Q6P9H5 292 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 ZMYM4Q5VZL5 1548 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 MYOM1P52179 1685 aa11.57□□□□□ -0.56
FN1-227ENST00000498719 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
FN1-227ENST00000498719 EXOC8Q8IYI6 725 aa11.56□□□□□ -0.56
FN1-227ENST00000498719 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
FN1-227ENST00000498719 PPP1R1BQ9UD71 204 aaPredicted RBP11.56□□□□□ -0.56
FN1-227ENST00000498719 INO80Q9ULG1 1556 aaPredicted RBP11.56□□□□□ -0.56
FN1-227ENST00000498719 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
FN1-227ENST00000498719 PPME1Q9Y570 386 aa11.56□□□□□ -0.56
FN1-227ENST00000498719 SYNMO15061 1565 aa11.55□□□□□ -0.56
FN1-227ENST00000498719 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
FN1-227ENST00000498719 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
FN1-227ENST00000498719 SREK1Q8WXA9 508 aaKnown RBP11.55□□□□□ -0.56
FN1-227ENST00000498719 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
FN1-227ENST00000498719 ADGRF5Q8IZF2 1346 aa11.55□□□□□ -0.56
FN1-227ENST00000498719 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
FN1-227ENST00000498719 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
FN1-227ENST00000498719 KANK1Q14678 1352 aa11.54□□□□□ -0.56
FN1-227ENST00000498719 ADGRL1O94910 1474 aa11.54□□□□□ -0.56
FN1-227ENST00000498719 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
FN1-227ENST00000498719 IPO9Q96P70 1041 aaKnown RBP11.54□□□□□ -0.56
FN1-227ENST00000498719 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
FN1-227ENST00000498719 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
FN1-227ENST00000498719 INSRP06213 1382 aa11.54□□□□□ -0.56
FN1-227ENST00000498719 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
FN1-227ENST00000498719 MROH1Q8NDA8 1641 aa11.53□□□□□ -0.56
FN1-227ENST00000498719 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
FN1-227ENST00000498719 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
FN1-227ENST00000498719 GSE1Q14687 1217 aa11.52□□□□□ -0.56
FN1-227ENST00000498719 DUSP27Q5VZP5 1158 aa11.52□□□□□ -0.56
FN1-227ENST00000498719 ABCA6Q8N139 1617 aa11.52□□□□□ -0.56
FN1-227ENST00000498719 KDM5AP29375 1690 aaKnown RBP11.52□□□□□ -0.57
FN1-227ENST00000498719 KIF1BO60333 1816 aa11.52□□□□□ -0.57
FN1-227ENST00000498719 PDE4AP27815 886 aa11.51□□□□□ -0.57
FN1-227ENST00000498719 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
FN1-227ENST00000498719 MAP3K4Q9Y6R4 1608 aa11.51□□□□□ -0.57
FN1-227ENST00000498719 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
FN1-227ENST00000498719 MICAL1Q8TDZ2 1067 aa11.51□□□□□ -0.57
FN1-227ENST00000498719 EIF3AQ14152 1382 aaKnown RBP11.51□□□□□ -0.57
FN1-227ENST00000498719 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 ERVK-7P63135 1459 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 KIDINS220Q9ULH0 1771 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 KIAA1210Q9ULL0 1709 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
FN1-227ENST00000498719 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
FN1-227ENST00000498719 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
FN1-227ENST00000498719 TCF3P15923 654 aa11.49□□□□□ -0.57
FN1-227ENST00000498719 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
FN1-227ENST00000498719 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
FN1-227ENST00000498719 PLCD4Q9BRC7 762 aa11.49□□□□□ -0.57
FN1-227ENST00000498719 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
FN1-227ENST00000498719 APAF1O14727 1248 aa11.49□□□□□ -0.57
FN1-227ENST00000498719 SGIP1Q9BQI5 828 aa11.49□□□□□ -0.57
FN1-227ENST00000498719 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
FN1-227ENST00000498719 PIK3C2GO75747 1445 aa11.48□□□□□ -0.57
FN1-227ENST00000498719 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.48□□□□□ -0.57
FN1-227ENST00000498719 FOSBP53539 338 aa11.48□□□□□ -0.57
FN1-227ENST00000498719 RBM27Q9P2N5 1060 aaKnown RBP11.48□□□□□ -0.57
FN1-227ENST00000498719 EFCAB6Q5THR3 1501 aa11.48□□□□□ -0.57
FN1-227ENST00000498719 IFT172Q9UG01 1749 aa11.48□□□□□ -0.57
FN1-227ENST00000498719 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
FN1-227ENST00000498719 ANAPC15P60006 121 aa11.48□□□□□ -0.57
FN1-227ENST00000498719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.57
FN1-227ENST00000498719 TPD52L2O43399 206 aaKnown RBP11.47□□□□□ -0.57
FN1-227ENST00000498719 MYOM2P54296 1465 aa11.47□□□□□ -0.57
FN1-227ENST00000498719 NOS1P29475 1434 aa11.46□□□□□ -0.57
FN1-227ENST00000498719 GPR37O15354 613 aa11.46□□□□□ -0.57
FN1-227ENST00000498719 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
FN1-227ENST00000498719 TRAK1Q9UPV9 953 aa11.46□□□□□ -0.57
FN1-227ENST00000498719 NPC1L1Q9UHC9 1359 aa11.46□□□□□ -0.58
FN1-227ENST00000498719 GGT6Q6P531 493 aa11.46□□□□□ -0.58
FN1-227ENST00000498719 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.58
FN1-227ENST00000498719 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
FN1-227ENST00000498719 NUBP1P53384 320 aa11.45□□□□□ -0.58
FN1-227ENST00000498719 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
FN1-227ENST00000498719 CNPY4Q8N129 248 aa11.45□□□□□ -0.58
FN1-227ENST00000498719 MS4A1P11836 297 aa11.45□□□□□ -0.58
FN1-227ENST00000498719 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
FN1-227ENST00000498719 CCDC102AQ96A19 550 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms