RNA–Protein interactions for RNA: ENST00000498617.5

RTCA-205, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 5

Gene RTCA, Length 731 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-205ENST00000498617 ABCA3Q99758 1704 aa24.68■■□□□ 1.54
RTCA-205ENST00000498617 UNC5CLQ8IV45 518 aa24.67■■□□□ 1.54
RTCA-205ENST00000498617 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
RTCA-205ENST00000498617 RALGAPBQ86X10 1494 aa24.65■■□□□ 1.54
RTCA-205ENST00000498617 ATRNO75882 1429 aa24.65■■□□□ 1.54
RTCA-205ENST00000498617 BCL9LQ86UU0 1499 aa24.64■■□□□ 1.54
RTCA-205ENST00000498617 CABP1Q9NZU7 370 aa24.63■■□□□ 1.53
RTCA-205ENST00000498617 NWD2Q9ULI1 1742 aa24.63■■□□□ 1.53
RTCA-205ENST00000498617 CLSPNQ9HAW4 1339 aa24.62■■□□□ 1.53
RTCA-205ENST00000498617 SLIT2O94813 1529 aa24.62■■□□□ 1.53
RTCA-205ENST00000498617 ABTB2Q8N961 1025 aa24.62■■□□□ 1.53
RTCA-205ENST00000498617 BRD4O60885 1362 aaPredicted RBP24.62■■□□□ 1.53
RTCA-205ENST00000498617 GJD4Q96KN9 370 aaPredicted RBP24.61■■□□□ 1.53
RTCA-205ENST00000498617 CCDC9Q9Y3X0 531 aaKnown RBP24.61■■□□□ 1.53
RTCA-205ENST00000498617 PLCH1Q4KWH8 1693 aa24.61■■□□□ 1.53
RTCA-205ENST00000498617 ATAD2Q6PL18 1390 aa24.59■■□□□ 1.53
RTCA-205ENST00000498617 SLC24A1O60721 1099 aa24.59■■□□□ 1.53
RTCA-205ENST00000498617 TIMELESSQ9UNS1 1208 aa24.59■■□□□ 1.53
RTCA-205ENST00000498617 RGS12O14924 1447 aa24.59■■□□□ 1.53
RTCA-205ENST00000498617 FAM83GA6ND36 823 aa24.58■■□□□ 1.53
RTCA-205ENST00000498617 NUTM2GQ5VZR2 741 aa24.58■■□□□ 1.53
RTCA-205ENST00000498617 NLRP13Q86W25 1043 aa24.58■■□□□ 1.53
RTCA-205ENST00000498617 ZNF692Q9BU19 519 aaPredicted RBP24.58■■□□□ 1.53
RTCA-205ENST00000498617 COL14A1Q05707 1796 aaKnown RBP24.57■■□□□ 1.52
RTCA-205ENST00000498617 SBNO2Q9Y2G9 1366 aa24.57■■□□□ 1.52
RTCA-205ENST00000498617 PRDM11Q9NQV5 511 aa24.57■■□□□ 1.52
RTCA-205ENST00000498617 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
RTCA-205ENST00000498617 VPS72Q15906 364 aa24.55■■□□□ 1.52
RTCA-205ENST00000498617 BTG4Q9NY30 223 aa24.55■■□□□ 1.52
RTCA-205ENST00000498617 PHRF1Q9P1Y6 1649 aaKnown RBP24.53■■□□□ 1.52
RTCA-205ENST00000498617 USP6P35125 1406 aa24.52■■□□□ 1.52
RTCA-205ENST00000498617 CCER1Q8TC90 406 aaPredicted RBP24.52■■□□□ 1.52
RTCA-205ENST00000498617 UPF1Q92900 1129 aaKnown RBP eCLIP24.52■■□□□ 1.52
RTCA-205ENST00000498617 ZC3H6P61129 1189 aaKnown RBP24.51■■□□□ 1.51
RTCA-205ENST00000498617 AKAP12Q02952 1782 aa24.5■■□□□ 1.51
RTCA-205ENST00000498617 NLRP6P59044 892 aa24.5■■□□□ 1.51
RTCA-205ENST00000498617 TMC1Q8TDI8 760 aa24.49■■□□□ 1.51
RTCA-205ENST00000498617 KIAA0232Q92628 1395 aa24.49■■□□□ 1.51
RTCA-205ENST00000498617 KTN1Q86UP2 1357 aaKnown RBP24.47■■□□□ 1.51
RTCA-205ENST00000498617 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
RTCA-205ENST00000498617 A0A0G2JS52 829 aa24.47■■□□□ 1.51
RTCA-205ENST00000498617 MYT1Q01538 1121 aa24.47■■□□□ 1.51
RTCA-205ENST00000498617 PUS7Q96PZ0 661 aaKnown RBP24.47■■□□□ 1.51
RTCA-205ENST00000498617 NRAPQ86VF7 1730 aa24.47■■□□□ 1.51
RTCA-205ENST00000498617 GLI3P10071 1580 aa24.46■■□□□ 1.51
RTCA-205ENST00000498617 EVA1CP58658 441 aa24.46■■□□□ 1.51
RTCA-205ENST00000498617 HDGFL2Q7Z4V5 671 aaPredicted RBP24.46■■□□□ 1.51
RTCA-205ENST00000498617 USP19O94966 1318 aa24.45■■□□□ 1.5
RTCA-205ENST00000498617 TTC21AQ8NDW8 1320 aa24.45■■□□□ 1.5
RTCA-205ENST00000498617 GCP02774 474 aa24.45■■□□□ 1.5
RTCA-205ENST00000498617 CHRNA2Q15822 529 aa24.45■■□□□ 1.5
RTCA-205ENST00000498617 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
RTCA-205ENST00000498617 TTC21BQ7Z4L5 1316 aa24.43■■□□□ 1.5
RTCA-205ENST00000498617 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
RTCA-205ENST00000498617 STRN4Q9NRL3 753 aa24.42■■□□□ 1.5
RTCA-205ENST00000498617 NRKQ7Z2Y5 1582 aa24.42■■□□□ 1.5
RTCA-205ENST00000498617 CPSF1Q10570 1443 aaKnown RBP24.41■■□□□ 1.5
RTCA-205ENST00000498617 CPDO75976 1380 aa24.41■■□□□ 1.5
RTCA-205ENST00000498617 USP47Q96K76 1375 aa24.41■■□□□ 1.5
RTCA-205ENST00000498617 BRWD3Q6RI45 1802 aa24.4■■□□□ 1.5
RTCA-205ENST00000498617 ZBTB7CA1YPR0 619 aa24.4■■□□□ 1.5
RTCA-205ENST00000498617 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
RTCA-205ENST00000498617 TMF1P82094 1093 aa24.4■■□□□ 1.5
RTCA-205ENST00000498617 KCNH5Q8NCM2 988 aa24.4■■□□□ 1.5
RTCA-205ENST00000498617 SSH2Q76I76 1423 aa24.4■■□□□ 1.5
RTCA-205ENST00000498617 MON2Q7Z3U7 1717 aa24.39■■□□□ 1.5
RTCA-205ENST00000498617 FAM98CQ17RN3 349 aaKnown RBP24.39■■□□□ 1.49
RTCA-205ENST00000498617 CCDC125Q86Z20 511 aa24.39■■□□□ 1.49
RTCA-205ENST00000498617 PIK3C2AO00443 1686 aa24.39■■□□□ 1.49
RTCA-205ENST00000498617 SPATA31A5Q5VU36 1347 aa24.38■■□□□ 1.49
RTCA-205ENST00000498617 SPATA31A7Q8IWB4 1347 aa24.38■■□□□ 1.49
RTCA-205ENST00000498617 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
RTCA-205ENST00000498617 TESK2Q96S53 571 aa24.38■■□□□ 1.49
RTCA-205ENST00000498617 NINLQ9Y2I6 1382 aa24.38■■□□□ 1.49
RTCA-205ENST00000498617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.37■■□□□ 1.49
RTCA-205ENST00000498617 SLC12A5Q9H2X9 1139 aa24.37■■□□□ 1.49
RTCA-205ENST00000498617 KRT27Q7Z3Y8 459 aa24.36■■□□□ 1.49
RTCA-205ENST00000498617 SLIT3O75094 1523 aa24.34■■□□□ 1.49
RTCA-205ENST00000498617 SPATA31A1Q5TZJ5 1347 aa24.33■■□□□ 1.48
RTCA-205ENST00000498617 SOX12O15370 315 aa24.32■■□□□ 1.48
RTCA-205ENST00000498617 SF3B2Q13435 895 aaKnown RBP24.32■■□□□ 1.48
RTCA-205ENST00000498617 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
RTCA-205ENST00000498617 EDC4Q6P2E9 1401 aaKnown RBP24.32■■□□□ 1.48
RTCA-205ENST00000498617 CAMTA1Q9Y6Y1 1673 aa24.31■■□□□ 1.48
RTCA-205ENST00000498617 LMO7Q8WWI1 1683 aa24.3■■□□□ 1.48
RTCA-205ENST00000498617 AATKQ6ZMQ8 1374 aa24.3■■□□□ 1.48
RTCA-205ENST00000498617 CD163L1Q9NR16 1453 aa24.29■■□□□ 1.48
RTCA-205ENST00000498617 A0A1W2PP64 1363 aa24.29■■□□□ 1.48
RTCA-205ENST00000498617 LARP1Q6PKG0 1096 aaKnown RBP24.28■■□□□ 1.48
RTCA-205ENST00000498617 TCP11L2Q8N4U5 519 aa24.28■■□□□ 1.48
RTCA-205ENST00000498617 EP400Q96L91 3159 aa24.28■■□□□ 1.48
RTCA-205ENST00000498617 THRAP3Q9Y2W1 955 aaKnown RBP24.27■■□□□ 1.48
RTCA-205ENST00000498617 BARGINQ6ZT62 677 aa24.26■■□□□ 1.47
RTCA-205ENST00000498617 ARHGEF25Q86VW2 580 aa24.26■■□□□ 1.47
RTCA-205ENST00000498617 NME9Q86XW9 330 aa24.26■■□□□ 1.47
RTCA-205ENST00000498617 USP31Q70CQ4 1352 aa24.26■■□□□ 1.47
RTCA-205ENST00000498617 COL5A2P05997 1499 aaPredicted RBP24.26■■□□□ 1.47
RTCA-205ENST00000498617 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
RTCA-205ENST00000498617 TOM1L2Q6ZVM7 507 aa24.24■■□□□ 1.47
RTCA-205ENST00000498617 USP54Q70EL1 1684 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms