RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SYNMO15061 1565 aa10.77□□□□□ -0.68
CDC42-205ENST00000498236 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.68
CDC42-205ENST00000498236 LAMC1P11047 1609 aa10.77□□□□□ -0.68
CDC42-205ENST00000498236 TRPM1Q7Z4N2 1603 aa10.77□□□□□ -0.68
CDC42-205ENST00000498236 RGL3Q3MIN7 710 aa10.77□□□□□ -0.69
CDC42-205ENST00000498236 TMC2Q8TDI7 906 aa10.77□□□□□ -0.69
CDC42-205ENST00000498236 PREX1Q8TCU6 1659 aa10.76□□□□□ -0.69
CDC42-205ENST00000498236 ERVK-7P63135 1459 aa10.76□□□□□ -0.69
CDC42-205ENST00000498236 HSPA5P11021 654 aaKnown RBP10.76□□□□□ -0.69
CDC42-205ENST00000498236 RPGRIP1LQ68CZ1 1315 aa10.76□□□□□ -0.69
CDC42-205ENST00000498236 MADDQ8WXG6 1647 aa10.76□□□□□ -0.69
CDC42-205ENST00000498236 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
CDC42-205ENST00000498236 SPATA31D1Q6ZQQ2 1576 aa10.75□□□□□ -0.69
CDC42-205ENST00000498236 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
CDC42-205ENST00000498236 IFT172Q9UG01 1749 aa10.75□□□□□ -0.69
CDC42-205ENST00000498236 DSG2Q14126 1118 aa10.74□□□□□ -0.69
CDC42-205ENST00000498236 ZNF326Q5BKZ1 582 aaKnown RBP10.74□□□□□ -0.69
CDC42-205ENST00000498236 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
CDC42-205ENST00000498236 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
CDC42-205ENST00000498236 KIAA1210Q9ULL0 1709 aa10.74□□□□□ -0.69
CDC42-205ENST00000498236 ROCK2O75116 1388 aaKnown RBP10.74□□□□□ -0.69
CDC42-205ENST00000498236 USP47Q96K76 1375 aa10.74□□□□□ -0.69
CDC42-205ENST00000498236 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
CDC42-205ENST00000498236 CARD11Q9BXL7 1154 aa10.73□□□□□ -0.69
CDC42-205ENST00000498236 FOXK1P85037 733 aa10.72□□□□□ -0.69
CDC42-205ENST00000498236 IDI1Q13907 227 aa10.72□□□□□ -0.69
CDC42-205ENST00000498236 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
CDC42-205ENST00000498236 ZMYM3Q14202 1370 aa10.72□□□□□ -0.69
CDC42-205ENST00000498236 ZFYVE9O95405 1425 aa10.72□□□□□ -0.69
CDC42-205ENST00000498236 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.69
CDC42-205ENST00000498236 PPLO60437 1756 aa10.7□□□□□ -0.7
CDC42-205ENST00000498236 TMEM131LA2VDJ0 1609 aa10.7□□□□□ -0.7
CDC42-205ENST00000498236 FBXO31Q5XUX0 539 aaPredicted RBP10.7□□□□□ -0.7
CDC42-205ENST00000498236 HIRIP3Q9BW71 556 aaPredicted RBP10.7□□□□□ -0.7
CDC42-205ENST00000498236 CFAP65Q6ZU64 1925 aaKnown RBP10.7□□□□□ -0.7
CDC42-205ENST00000498236 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
CDC42-205ENST00000498236 WASHC2AQ641Q2 1341 aa10.69□□□□□ -0.7
CDC42-205ENST00000498236 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
CDC42-205ENST00000498236 MLECQ14165 292 aa10.69□□□□□ -0.7
CDC42-205ENST00000498236 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
CDC42-205ENST00000498236 EMILIN3Q9NT22 766 aa10.69□□□□□ -0.7
CDC42-205ENST00000498236 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
CDC42-205ENST00000498236 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
CDC42-205ENST00000498236 CCDC7Q96M83 1385 aa10.68□□□□□ -0.7
CDC42-205ENST00000498236 NBPF1Q3BBV0 1214 aa10.68□□□□□ -0.7
CDC42-205ENST00000498236 PLPP6Q8IY26 295 aa10.68□□□□□ -0.7
CDC42-205ENST00000498236 KDM5AP29375 1690 aaKnown RBP10.68□□□□□ -0.7
CDC42-205ENST00000498236 SETBP1Q9Y6X0 1596 aa10.68□□□□□ -0.7
CDC42-205ENST00000498236 ADGRF5Q8IZF2 1346 aa10.67□□□□□ -0.7
CDC42-205ENST00000498236 DPYSL4O14531 572 aa10.67□□□□□ -0.7
CDC42-205ENST00000498236 KIF3CO14782 793 aa10.67□□□□□ -0.7
CDC42-205ENST00000498236 SCAF11Q99590 1463 aaKnown RBP10.67□□□□□ -0.7
CDC42-205ENST00000498236 IQGAP1P46940 1657 aa10.66□□□□□ -0.7
CDC42-205ENST00000498236 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
CDC42-205ENST00000498236 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
CDC42-205ENST00000498236 DDX10Q13206 875 aaKnown RBP10.66□□□□□ -0.7
CDC42-205ENST00000498236 ZC3H15Q8WU90 426 aaKnown RBP10.66□□□□□ -0.7
CDC42-205ENST00000498236 TNRQ92752 1358 aa10.65□□□□□ -0.7
CDC42-205ENST00000498236 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
CDC42-205ENST00000498236 ST20-MTHFSA0A0A6YYL1 179 aa10.65□□□□□ -0.7
CDC42-205ENST00000498236 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
CDC42-205ENST00000498236 ZNF687Q8N1G0 1237 aa10.65□□□□□ -0.7
CDC42-205ENST00000498236 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
CDC42-205ENST00000498236 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
CDC42-205ENST00000498236 A2ML1A8K2U0 1454 aa10.65□□□□□ -0.7
CDC42-205ENST00000498236 NLRP1Q9C000 1473 aa10.64□□□□□ -0.71
CDC42-205ENST00000498236 GPR153Q6NV75 609 aa10.64□□□□□ -0.71
CDC42-205ENST00000498236 FER1L4A9Z1Z3 1794 aa10.64□□□□□ -0.71
CDC42-205ENST00000498236 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
CDC42-205ENST00000498236 PDIA6Q15084 440 aa10.63□□□□□ -0.71
CDC42-205ENST00000498236 TESK2Q96S53 571 aa10.63□□□□□ -0.71
CDC42-205ENST00000498236 ADGRB1O14514 1584 aa10.63□□□□□ -0.71
CDC42-205ENST00000498236 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
CDC42-205ENST00000498236 MYO5BQ9ULV0 1848 aa10.62□□□□□ -0.71
CDC42-205ENST00000498236 C3P01024 1663 aa10.62□□□□□ -0.71
CDC42-205ENST00000498236 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
CDC42-205ENST00000498236 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
CDC42-205ENST00000498236 ADAMTSL3P82987 1691 aa10.6□□□□□ -0.71
CDC42-205ENST00000498236 MYO3AQ8NEV4 1616 aa10.6□□□□□ -0.71
CDC42-205ENST00000498236 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDC42-205ENST00000498236 RIMS2Q9UQ26 1411 aa10.59□□□□□ -0.71
CDC42-205ENST00000498236 UBR1Q8IWV7 1749 aa10.59□□□□□ -0.71
CDC42-205ENST00000498236 PTGER2P43116 358 aa10.59□□□□□ -0.71
CDC42-205ENST00000498236 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
CDC42-205ENST00000498236 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
CDC42-205ENST00000498236 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
CDC42-205ENST00000498236 TMF1P82094 1093 aa10.58□□□□□ -0.72
CDC42-205ENST00000498236 CDCA8Q53HL2 280 aa10.57□□□□□ -0.72
CDC42-205ENST00000498236 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
CDC42-205ENST00000498236 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
CDC42-205ENST00000498236 ALKQ9UM73 1620 aa10.56□□□□□ -0.72
CDC42-205ENST00000498236 ANP32CO43423 234 aa10.56□□□□□ -0.72
CDC42-205ENST00000498236 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
CDC42-205ENST00000498236 SLIT1O75093 1534 aa10.56□□□□□ -0.72
CDC42-205ENST00000498236 ASXL1Q8IXJ9 1541 aa10.56□□□□□ -0.72
CDC42-205ENST00000498236 ARHGAP23Q9P227 1491 aa10.55□□□□□ -0.72
CDC42-205ENST00000498236 CCER2I3L3R5 266 aa10.55□□□□□ -0.72
CDC42-205ENST00000498236 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CDC42-205ENST00000498236 CEBPAP49715 358 aaPredicted RBP10.55□□□□□ -0.72
CDC42-205ENST00000498236 RIMS1Q86UR5 1692 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms