RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CCDC9Q9Y3X0 531 aaKnown RBP27.01■■□□□ 1.91
PRKCB-209ENST00000498058 CDK19Q9BWU1 502 aa27■■□□□ 1.91
PRKCB-209ENST00000498058 COL14A1Q05707 1796 aaKnown RBP26.99■■□□□ 1.91
PRKCB-209ENST00000498058 BTG4Q9NY30 223 aa26.99■■□□□ 1.91
PRKCB-209ENST00000498058 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
PRKCB-209ENST00000498058 PAK3O75914 559 aaPredicted RBP26.97■■□□□ 1.91
PRKCB-209ENST00000498058 BLMP54132 1417 aaPredicted RBP26.96■■□□□ 1.91
PRKCB-209ENST00000498058 DEFB132Q7Z7B7 95 aa26.94■■□□□ 1.9
PRKCB-209ENST00000498058 KRT27Q7Z3Y8 459 aa26.93■■□□□ 1.9
PRKCB-209ENST00000498058 SRCAPQ6ZRS2 3230 aa26.92■■□□□ 1.9
PRKCB-209ENST00000498058 PHRF1Q9P1Y6 1649 aaKnown RBP26.92■■□□□ 1.9
PRKCB-209ENST00000498058 FAM98CQ17RN3 349 aaKnown RBP26.92■■□□□ 1.9
PRKCB-209ENST00000498058 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
PRKCB-209ENST00000498058 ACEP12821 1306 aa26.91■■□□□ 1.9
PRKCB-209ENST00000498058 ZRANB1Q9UGI0 708 aa26.91■■□□□ 1.9
PRKCB-209ENST00000498058 NUTM2GQ5VZR2 741 aa26.9■■□□□ 1.9
PRKCB-209ENST00000498058 NBPF8Q3BBV2 869 aa26.89■■□□□ 1.9
PRKCB-209ENST00000498058 CCDC61Q9Y6R9 512 aa26.89■■□□□ 1.9
PRKCB-209ENST00000498058 SPATA31A5Q5VU36 1347 aa26.89■■□□□ 1.89
PRKCB-209ENST00000498058 SPATA31A7Q8IWB4 1347 aa26.89■■□□□ 1.89
PRKCB-209ENST00000498058 KIAA0232Q92628 1395 aa26.88■■□□□ 1.89
PRKCB-209ENST00000498058 PLEKHG3A1L390 1219 aa26.88■■□□□ 1.89
PRKCB-209ENST00000498058 PRDM11Q9NQV5 511 aa26.88■■□□□ 1.89
PRKCB-209ENST00000498058 CHRNA2Q15822 529 aa26.87■■□□□ 1.89
PRKCB-209ENST00000498058 A0A0G2JS52 829 aa26.86■■□□□ 1.89
PRKCB-209ENST00000498058 MYT1Q01538 1121 aa26.86■■□□□ 1.89
PRKCB-209ENST00000498058 THSD7AQ9UPZ6 1657 aa26.85■■□□□ 1.89
PRKCB-209ENST00000498058 ZC3H6P61129 1189 aaKnown RBP26.84■■□□□ 1.89
PRKCB-209ENST00000498058 FAM182BQ5T319 152 aa26.84■■□□□ 1.89
PRKCB-209ENST00000498058 L3MBTL2Q969R5 705 aa26.84■■□□□ 1.89
PRKCB-209ENST00000498058 SIN3AQ96ST3 1273 aa26.83■■□□□ 1.89
PRKCB-209ENST00000498058 CENPJQ9HC77 1338 aaPredicted RBP26.83■■□□□ 1.89
PRKCB-209ENST00000498058 QRICH2Q9H0J4 1663 aa26.82■■□□□ 1.88
PRKCB-209ENST00000498058 CABP2Q9NPB3 220 aa26.82■■□□□ 1.88
PRKCB-209ENST00000498058 NRKQ7Z2Y5 1582 aa26.81■■□□□ 1.88
PRKCB-209ENST00000498058 PPIP5K1Q6PFW1 1433 aa26.8■■□□□ 1.88
PRKCB-209ENST00000498058 SRPK2P78362 688 aaKnown RBP26.79■■□□□ 1.88
PRKCB-209ENST00000498058 SF3B2Q13435 895 aaKnown RBP26.79■■□□□ 1.88
PRKCB-209ENST00000498058 SPATA31A1Q5TZJ5 1347 aa26.79■■□□□ 1.88
PRKCB-209ENST00000498058 ABTB2Q8N961 1025 aa26.78■■□□□ 1.88
PRKCB-209ENST00000498058 STRN4Q9NRL3 753 aa26.78■■□□□ 1.88
PRKCB-209ENST00000498058 TRPM1Q7Z4N2 1603 aa26.77■■□□□ 1.88
PRKCB-209ENST00000498058 USP19O94966 1318 aa26.77■■□□□ 1.88
PRKCB-209ENST00000498058 CAMTA1Q9Y6Y1 1673 aa26.76■■□□□ 1.87
PRKCB-209ENST00000498058 LMO7Q8WWI1 1683 aa26.75■■□□□ 1.87
PRKCB-209ENST00000498058 CABP1Q9NZU7 370 aa26.73■■□□□ 1.87
PRKCB-209ENST00000498058 SSH2Q76I76 1423 aa26.73■■□□□ 1.87
PRKCB-209ENST00000498058 RGPD1P0DJD0 1748 aa26.72■■□□□ 1.87
PRKCB-209ENST00000498058 CPDO75976 1380 aa26.71■■□□□ 1.87
PRKCB-209ENST00000498058 TNS1Q9HBL0 1735 aaKnown RBP26.71■■□□□ 1.87
PRKCB-209ENST00000498058 NEUROD1Q13562 356 aa26.71■■□□□ 1.87
PRKCB-209ENST00000498058 BAG6P46379 1132 aa26.7■■□□□ 1.86
PRKCB-209ENST00000498058 LARP1Q6PKG0 1096 aaKnown RBP26.7■■□□□ 1.86
PRKCB-209ENST00000498058 USP35Q9P2H5 1018 aa26.7■■□□□ 1.86
PRKCB-209ENST00000498058 GCP02774 474 aa26.69■■□□□ 1.86
PRKCB-209ENST00000498058 USP6P35125 1406 aa26.69■■□□□ 1.86
PRKCB-209ENST00000498058 EN1Q05925 392 aaPredicted RBP26.69■■□□□ 1.86
PRKCB-209ENST00000498058 NLRP13Q86W25 1043 aa26.68■■□□□ 1.86
PRKCB-209ENST00000498058 EVA1CP58658 441 aa26.67■■□□□ 1.86
PRKCB-209ENST00000498058 PSDA5PKW4 1024 aaPredicted RBP26.65■■□□□ 1.86
PRKCB-209ENST00000498058 BARGINQ6ZT62 677 aa26.65■■□□□ 1.86
PRKCB-209ENST00000498058 PIK3C2AO00443 1686 aa26.64■■□□□ 1.86
PRKCB-209ENST00000498058 BRD4O60885 1362 aaPredicted RBP26.64■■□□□ 1.86
PRKCB-209ENST00000498058 SLIT3O75094 1523 aa26.64■■□□□ 1.85
PRKCB-209ENST00000498058 ROCK2O75116 1388 aaKnown RBP26.63■■□□□ 1.85
PRKCB-209ENST00000498058 DISP2A7MBM2 1401 aa26.63■■□□□ 1.85
PRKCB-209ENST00000498058 EVC2Q86UK5 1308 aa26.63■■□□□ 1.85
PRKCB-209ENST00000498058 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
PRKCB-209ENST00000498058 TRIM37O94972 964 aa26.62■■□□□ 1.85
PRKCB-209ENST00000498058 NLRP6P59044 892 aa26.62■■□□□ 1.85
PRKCB-209ENST00000498058 EZH2Q15910 746 aaKnown RBP26.6■■□□□ 1.85
PRKCB-209ENST00000498058 TCP11L2Q8N4U5 519 aa26.6■■□□□ 1.85
PRKCB-209ENST00000498058 COL18A1P39060 1754 aa26.6■■□□□ 1.85
PRKCB-209ENST00000498058 AKAP12Q02952 1782 aa26.6■■□□□ 1.85
PRKCB-209ENST00000498058 FAM196AQ6ZSG2 479 aa26.59■■□□□ 1.85
PRKCB-209ENST00000498058 LRP5O75197 1615 aa26.58■■□□□ 1.85
PRKCB-209ENST00000498058 ZBTB7CA1YPR0 619 aa26.58■■□□□ 1.85
PRKCB-209ENST00000498058 CAMKK2Q96RR4 588 aa26.57■■□□□ 1.84
PRKCB-209ENST00000498058 AATKQ6ZMQ8 1374 aa26.56■■□□□ 1.84
PRKCB-209ENST00000498058 PARP4Q9UKK3 1724 aaKnown RBP26.56■■□□□ 1.84
PRKCB-209ENST00000498058 TTC21BQ7Z4L5 1316 aa26.55■■□□□ 1.84
PRKCB-209ENST00000498058 PDE3BQ13370 1112 aa26.54■■□□□ 1.84
PRKCB-209ENST00000498058 AXIN2Q9Y2T1 843 aa26.54■■□□□ 1.84
PRKCB-209ENST00000498058 THRAP3Q9Y2W1 955 aaKnown RBP26.53■■□□□ 1.84
PRKCB-209ENST00000498058 CRB1P82279 1406 aa26.53■■□□□ 1.84
PRKCB-209ENST00000498058 CPSF1Q10570 1443 aaKnown RBP26.53■■□□□ 1.84
PRKCB-209ENST00000498058 APBA3O96018 575 aa26.52■■□□□ 1.84
PRKCB-209ENST00000498058 R3HDM1Q15032 1099 aaKnown RBP26.52■■□□□ 1.84
PRKCB-209ENST00000498058 RGPD5Q99666 1765 aa26.52■■□□□ 1.84
PRKCB-209ENST00000498058 ZNF692Q9BU19 519 aaPredicted RBP26.5■■□□□ 1.83
PRKCB-209ENST00000498058 PEAK1Q9H792 1746 aa26.49■■□□□ 1.83
PRKCB-209ENST00000498058 RREB1Q92766 1687 aa26.49■■□□□ 1.83
PRKCB-209ENST00000498058 ARHGEF25Q86VW2 580 aa26.48■■□□□ 1.83
PRKCB-209ENST00000498058 MON2Q7Z3U7 1717 aa26.48■■□□□ 1.83
PRKCB-209ENST00000498058 LRRC37A3O60309 1634 aa26.47■■□□□ 1.83
PRKCB-209ENST00000498058 WNK3Q9BYP7 1800 aa26.46■■□□□ 1.83
PRKCB-209ENST00000498058 NFAT5O94916 1531 aa26.46■■□□□ 1.83
PRKCB-209ENST00000498058 NUP188Q5SRE5 1749 aa26.46■■□□□ 1.83
PRKCB-209ENST00000498058 SOX12O15370 315 aa26.46■■□□□ 1.83
PRKCB-209ENST00000498058 SBNO2Q9Y2G9 1366 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms