RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 EDC4Q6P2E9 1401 aaKnown RBP18.72■□□□□ 0.59
CPNE1-227ENST00000498056 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.59
CPNE1-227ENST00000498056 FOXO3O43524 673 aa18.71■□□□□ 0.59
CPNE1-227ENST00000498056 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
CPNE1-227ENST00000498056 TNS3Q68CZ2 1445 aa18.68■□□□□ 0.58
CPNE1-227ENST00000498056 PSME1Q06323 249 aa18.68■□□□□ 0.58
CPNE1-227ENST00000498056 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
CPNE1-227ENST00000498056 PANK3Q9H999 370 aa18.68■□□□□ 0.58
CPNE1-227ENST00000498056 COL22A1Q8NFW1 1626 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-227ENST00000498056 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-227ENST00000498056 LTN1O94822 1766 aa18.65■□□□□ 0.58
CPNE1-227ENST00000498056 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-227ENST00000498056 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
CPNE1-227ENST00000498056 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
CPNE1-227ENST00000498056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
CPNE1-227ENST00000498056 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-227ENST00000498056 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
CPNE1-227ENST00000498056 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-227ENST00000498056 CARD14Q9BXL6 1004 aa18.62■□□□□ 0.57
CPNE1-227ENST00000498056 SOS2Q07890 1332 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-227ENST00000498056 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
CPNE1-227ENST00000498056 TTC21AQ8NDW8 1320 aa18.62■□□□□ 0.57
CPNE1-227ENST00000498056 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
CPNE1-227ENST00000498056 OVOS2A0A0J9YW53 1432 aa18.6■□□□□ 0.57
CPNE1-227ENST00000498056 OVOS2Q6IE36 1432 aa18.6■□□□□ 0.57
CPNE1-227ENST00000498056 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
CPNE1-227ENST00000498056 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
CPNE1-227ENST00000498056 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
CPNE1-227ENST00000498056 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
CPNE1-227ENST00000498056 SPATA31A3Q5VYP0 1347 aa18.59■□□□□ 0.57
CPNE1-227ENST00000498056 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-227ENST00000498056 NME9Q86XW9 330 aa18.59■□□□□ 0.57
CPNE1-227ENST00000498056 SLIT3O75094 1523 aa18.59■□□□□ 0.57
CPNE1-227ENST00000498056 NSD2O96028 1365 aa18.58■□□□□ 0.57
CPNE1-227ENST00000498056 PLEKHG5O94827 1062 aa18.57■□□□□ 0.56
CPNE1-227ENST00000498056 NUTM2GQ5VZR2 741 aa18.57■□□□□ 0.56
CPNE1-227ENST00000498056 PNPLA6Q8IY17 1366 aa18.56■□□□□ 0.56
CPNE1-227ENST00000498056 ABTB2Q8N961 1025 aa18.56■□□□□ 0.56
CPNE1-227ENST00000498056 FBXO41Q8TF61 875 aa18.56■□□□□ 0.56
CPNE1-227ENST00000498056 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
CPNE1-227ENST00000498056 HSPA1LP34931 641 aa18.55■□□□□ 0.56
CPNE1-227ENST00000498056 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
CPNE1-227ENST00000498056 NFAT5O94916 1531 aa18.54■□□□□ 0.56
CPNE1-227ENST00000498056 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
CPNE1-227ENST00000498056 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
CPNE1-227ENST00000498056 RGPD5Q99666 1765 aa18.54■□□□□ 0.56
CPNE1-227ENST00000498056 PLCH1Q4KWH8 1693 aa18.54■□□□□ 0.56
CPNE1-227ENST00000498056 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-227ENST00000498056 NLRP6P59044 892 aa18.53■□□□□ 0.56
CPNE1-227ENST00000498056 AMER1Q5JTC6 1135 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-227ENST00000498056 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
CPNE1-227ENST00000498056 COG3Q96JB2 828 aa18.52■□□□□ 0.56
CPNE1-227ENST00000498056 JCADQ9P266 1359 aa18.52■□□□□ 0.55
CPNE1-227ENST00000498056 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
CPNE1-227ENST00000498056 FYB1O15117 783 aa18.51■□□□□ 0.55
CPNE1-227ENST00000498056 USP19O94966 1318 aa18.5■□□□□ 0.55
CPNE1-227ENST00000498056 PEAK1Q9H792 1746 aa18.5■□□□□ 0.55
CPNE1-227ENST00000498056 SOX12O15370 315 aa18.5■□□□□ 0.55
CPNE1-227ENST00000498056 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
CPNE1-227ENST00000498056 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-227ENST00000498056 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
CPNE1-227ENST00000498056 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
CPNE1-227ENST00000498056 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
CPNE1-227ENST00000498056 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
CPNE1-227ENST00000498056 TNNT2P45379 298 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-227ENST00000498056 LRP6O75581 1613 aa18.45■□□□□ 0.54
CPNE1-227ENST00000498056 COL18A1P39060 1754 aa18.45■□□□□ 0.54
CPNE1-227ENST00000498056 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
CPNE1-227ENST00000498056 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
CPNE1-227ENST00000498056 NWD2Q9ULI1 1742 aa18.44■□□□□ 0.54
CPNE1-227ENST00000498056 FAM208AQ9UK61 1670 aaKnown RBP18.44■□□□□ 0.54
CPNE1-227ENST00000498056 ABCC6O95255 1503 aa18.44■□□□□ 0.54
CPNE1-227ENST00000498056 NRAPQ86VF7 1730 aa18.43■□□□□ 0.54
CPNE1-227ENST00000498056 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
CPNE1-227ENST00000498056 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
CPNE1-227ENST00000498056 RGPD2P0DJD1 1756 aa18.42■□□□□ 0.54
CPNE1-227ENST00000498056 NUTM2BA6NNL0 878 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-227ENST00000498056 NUTM2EB1AL46 878 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-227ENST00000498056 ANP32CO43423 234 aa18.42■□□□□ 0.54
CPNE1-227ENST00000498056 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
CPNE1-227ENST00000498056 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
CPNE1-227ENST00000498056 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
CPNE1-227ENST00000498056 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-227ENST00000498056 GCP02774 474 aa18.4■□□□□ 0.54
CPNE1-227ENST00000498056 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
CPNE1-227ENST00000498056 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
CPNE1-227ENST00000498056 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.4■□□□□ 0.54
CPNE1-227ENST00000498056 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
CPNE1-227ENST00000498056 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
CPNE1-227ENST00000498056 FBLN1P23142 703 aa18.38■□□□□ 0.53
CPNE1-227ENST00000498056 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
CPNE1-227ENST00000498056 RALBP1Q15311 655 aa18.38■□□□□ 0.53
CPNE1-227ENST00000498056 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
CPNE1-227ENST00000498056 CPDO75976 1380 aa18.38■□□□□ 0.53
CPNE1-227ENST00000498056 WNK3Q9BYP7 1800 aa18.37■□□□□ 0.53
CPNE1-227ENST00000498056 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
CPNE1-227ENST00000498056 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
CPNE1-227ENST00000498056 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
CPNE1-227ENST00000498056 PRDM11Q9NQV5 511 aa18.36■□□□□ 0.53
CPNE1-227ENST00000498056 EMILIN1Q9Y6C2 1016 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms