RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
PDZRN3-212ENST00000498048 CARD14Q9BXL6 1004 aa10.87□□□□□ -0.67
PDZRN3-212ENST00000498048 GTF3C3Q9Y5Q9 886 aa10.87□□□□□ -0.67
PDZRN3-212ENST00000498048 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
PDZRN3-212ENST00000498048 HDGFL2Q7Z4V5 671 aaPredicted RBP10.86□□□□□ -0.67
PDZRN3-212ENST00000498048 PNISRQ8TF01 805 aaKnown RBP10.86□□□□□ -0.67
PDZRN3-212ENST00000498048 TERF2IPQ9NYB0 399 aa10.86□□□□□ -0.67
PDZRN3-212ENST00000498048 LRRC7Q96NW7 1537 aa10.85□□□□□ -0.67
PDZRN3-212ENST00000498048 WASLO00401 505 aaPredicted RBP10.85□□□□□ -0.67
PDZRN3-212ENST00000498048 TBX22Q9Y458 520 aa10.85□□□□□ -0.67
PDZRN3-212ENST00000498048 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
PDZRN3-212ENST00000498048 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
PDZRN3-212ENST00000498048 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-212ENST00000498048 ADGRL3Q9HAR2 1447 aa10.84□□□□□ -0.67
PDZRN3-212ENST00000498048 POLR3AO14802 1390 aaPredicted RBP10.83□□□□□ -0.68
PDZRN3-212ENST00000498048 MORC1Q86VD1 984 aa10.83□□□□□ -0.68
PDZRN3-212ENST00000498048 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
PDZRN3-212ENST00000498048 IQSEC2Q5JU85 1478 aa10.82□□□□□ -0.68
PDZRN3-212ENST00000498048 PEAK1Q9H792 1746 aa10.82□□□□□ -0.68
PDZRN3-212ENST00000498048 TRPM3Q9HCF6 1732 aaPredicted RBP10.82□□□□□ -0.68
PDZRN3-212ENST00000498048 WDR43Q15061 677 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDZRN3-212ENST00000498048 AMOTL2Q9Y2J4 779 aa10.82□□□□□ -0.68
PDZRN3-212ENST00000498048 LMTK3Q96Q04 1460 aa10.81□□□□□ -0.68
PDZRN3-212ENST00000498048 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
PDZRN3-212ENST00000498048 DSG3P32926 999 aa10.81□□□□□ -0.68
PDZRN3-212ENST00000498048 SMG6Q86US8 1419 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-212ENST00000498048 VIRMAQ69YN4 1812 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-212ENST00000498048 PRR36Q9H6K5 1346 aa10.81□□□□□ -0.68
PDZRN3-212ENST00000498048 NUDT16Q96DE0 195 aaKnown RBP10.8□□□□□ -0.68
PDZRN3-212ENST00000498048 CABP1Q9NZU7 370 aa10.8□□□□□ -0.68
PDZRN3-212ENST00000498048 USP6P35125 1406 aa10.8□□□□□ -0.68
PDZRN3-212ENST00000498048 RGPD1P0DJD0 1748 aa10.8□□□□□ -0.68
PDZRN3-212ENST00000498048 OVOS2A0A0J9YW53 1432 aa10.78□□□□□ -0.68
PDZRN3-212ENST00000498048 OVOS2Q6IE36 1432 aa10.78□□□□□ -0.68
PDZRN3-212ENST00000498048 KCNA6P17658 529 aa10.78□□□□□ -0.68
PDZRN3-212ENST00000498048 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
PDZRN3-212ENST00000498048 ALS2Q96Q42 1657 aa10.77□□□□□ -0.69
PDZRN3-212ENST00000498048 NEFLP07196 543 aa10.77□□□□□ -0.69
PDZRN3-212ENST00000498048 CFAP53Q96M91 514 aa10.77□□□□□ -0.69
PDZRN3-212ENST00000498048 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
PDZRN3-212ENST00000498048 CCDC61Q9Y6R9 512 aa10.77□□□□□ -0.69
PDZRN3-212ENST00000498048 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
PDZRN3-212ENST00000498048 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
PDZRN3-212ENST00000498048 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
PDZRN3-212ENST00000498048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
PDZRN3-212ENST00000498048 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
PDZRN3-212ENST00000498048 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
PDZRN3-212ENST00000498048 NUTM2FA1L443 756 aa10.74□□□□□ -0.69
PDZRN3-212ENST00000498048 FYB1O15117 783 aa10.74□□□□□ -0.69
PDZRN3-212ENST00000498048 NUDCQ9Y266 331 aa10.74□□□□□ -0.69
PDZRN3-212ENST00000498048 ABCA3Q99758 1704 aa10.74□□□□□ -0.69
PDZRN3-212ENST00000498048 RGPD5Q99666 1765 aa10.74□□□□□ -0.69
PDZRN3-212ENST00000498048 FKBP8Q14318 412 aa10.73□□□□□ -0.69
PDZRN3-212ENST00000498048 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
PDZRN3-212ENST00000498048 ACEP12821 1306 aa10.73□□□□□ -0.69
PDZRN3-212ENST00000498048 SSH2Q76I76 1423 aa10.73□□□□□ -0.69
PDZRN3-212ENST00000498048 MTHFSP49914 203 aa10.72□□□□□ -0.69
PDZRN3-212ENST00000498048 NME9Q86XW9 330 aa10.72□□□□□ -0.69
PDZRN3-212ENST00000498048 AATKQ6ZMQ8 1374 aa10.72□□□□□ -0.69
PDZRN3-212ENST00000498048 DCCP43146 1447 aa10.72□□□□□ -0.69
PDZRN3-212ENST00000498048 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
PDZRN3-212ENST00000498048 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
PDZRN3-212ENST00000498048 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
PDZRN3-212ENST00000498048 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.69
PDZRN3-212ENST00000498048 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
PDZRN3-212ENST00000498048 FAM208AQ9UK61 1670 aaKnown RBP10.71□□□□□ -0.69
PDZRN3-212ENST00000498048 NFAT5O94916 1531 aa10.7□□□□□ -0.7
PDZRN3-212ENST00000498048 TTC21BQ7Z4L5 1316 aa10.7□□□□□ -0.7
PDZRN3-212ENST00000498048 COG3Q96JB2 828 aa10.7□□□□□ -0.7
PDZRN3-212ENST00000498048 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-212ENST00000498048 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-212ENST00000498048 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
PDZRN3-212ENST00000498048 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
PDZRN3-212ENST00000498048 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
PDZRN3-212ENST00000498048 CAMTA1Q9Y6Y1 1673 aa10.69□□□□□ -0.7
PDZRN3-212ENST00000498048 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
PDZRN3-212ENST00000498048 SLIT3O75094 1523 aa10.68□□□□□ -0.7
PDZRN3-212ENST00000498048 PNPLA6Q8IY17 1366 aa10.68□□□□□ -0.7
PDZRN3-212ENST00000498048 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
PDZRN3-212ENST00000498048 NGDNQ8NEJ9 315 aaKnown RBP10.68□□□□□ -0.7
PDZRN3-212ENST00000498048 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
PDZRN3-212ENST00000498048 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
PDZRN3-212ENST00000498048 LRRC37A3O60309 1634 aa10.67□□□□□ -0.7
PDZRN3-212ENST00000498048 C1orf167Q5SNV9 1468 aa10.67□□□□□ -0.7
PDZRN3-212ENST00000498048 MST1RQ04912 1400 aa10.67□□□□□ -0.7
PDZRN3-212ENST00000498048 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
PDZRN3-212ENST00000498048 MED1Q15648 1581 aaPredicted RBP10.66□□□□□ -0.7
PDZRN3-212ENST00000498048 HSPA2P54652 639 aa10.66□□□□□ -0.7
PDZRN3-212ENST00000498048 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
PDZRN3-212ENST00000498048 ZNF521Q96K83 1311 aa10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 MAPK8IP3Q9UPT6 1336 aa10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 RUNDC1Q96C34 613 aa10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
PDZRN3-212ENST00000498048 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms