RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 CENPJQ9HC77 1338 aaPredicted RBP29.3■■■□□ 2.28
LMBR1-219ENST00000498034 CCDC61Q9Y6R9 512 aa29.3■■■□□ 2.28
LMBR1-219ENST00000498034 CRYBG1Q9Y4K1 1723 aa29.28■■■□□ 2.28
LMBR1-219ENST00000498034 ACEP12821 1306 aa29.28■■■□□ 2.28
LMBR1-219ENST00000498034 POLR3AO14802 1390 aaPredicted RBP29.26■■■□□ 2.28
LMBR1-219ENST00000498034 PLEKHG3A1L390 1219 aa29.26■■■□□ 2.27
LMBR1-219ENST00000498034 NBPF8Q3BBV2 869 aa29.26■■■□□ 2.27
LMBR1-219ENST00000498034 BTG4Q9NY30 223 aa29.26■■■□□ 2.27
LMBR1-219ENST00000498034 SRPK2P78362 688 aaKnown RBP29.25■■■□□ 2.27
LMBR1-219ENST00000498034 SEPT12Q8IYM1 358 aa29.25■■■□□ 2.27
LMBR1-219ENST00000498034 NRAPQ86VF7 1730 aa29.25■■■□□ 2.27
LMBR1-219ENST00000498034 BRWD3Q6RI45 1802 aa29.24■■■□□ 2.27
LMBR1-219ENST00000498034 COL14A1Q05707 1796 aaKnown RBP29.24■■■□□ 2.27
LMBR1-219ENST00000498034 CABP2Q9NPB3 220 aa29.24■■■□□ 2.27
LMBR1-219ENST00000498034 QRICH2Q9H0J4 1663 aa29.24■■■□□ 2.27
LMBR1-219ENST00000498034 TRPM1Q7Z4N2 1603 aa29.23■■■□□ 2.27
LMBR1-219ENST00000498034 NUTM2GQ5VZR2 741 aa29.23■■■□□ 2.27
LMBR1-219ENST00000498034 ONECUT3O60422 494 aaPredicted RBP29.21■■■□□ 2.27
LMBR1-219ENST00000498034 PRDM11Q9NQV5 511 aa29.2■■■□□ 2.26
LMBR1-219ENST00000498034 PPIP5K1Q6PFW1 1433 aa29.2■■■□□ 2.26
LMBR1-219ENST00000498034 CCDC125Q86Z20 511 aa29.18■■■□□ 2.26
LMBR1-219ENST00000498034 PHRF1Q9P1Y6 1649 aaKnown RBP29.18■■■□□ 2.26
LMBR1-219ENST00000498034 ROCK2O75116 1388 aaKnown RBP29.16■■■□□ 2.26
LMBR1-219ENST00000498034 KIAA0232Q92628 1395 aa29.16■■■□□ 2.26
LMBR1-219ENST00000498034 ZC3H6P61129 1189 aaKnown RBP29.15■■■□□ 2.26
LMBR1-219ENST00000498034 CHRNA2Q15822 529 aa29.15■■■□□ 2.26
LMBR1-219ENST00000498034 FAM98CQ17RN3 349 aaKnown RBP29.15■■■□□ 2.26
LMBR1-219ENST00000498034 ABTB2Q8N961 1025 aa29.15■■■□□ 2.26
LMBR1-219ENST00000498034 A0A0G2JS52 829 aa29.14■■■□□ 2.26
LMBR1-219ENST00000498034 MYT1Q01538 1121 aa29.14■■■□□ 2.26
LMBR1-219ENST00000498034 KRT27Q7Z3Y8 459 aa29.13■■■□□ 2.25
LMBR1-219ENST00000498034 CABP1Q9NZU7 370 aa29.13■■■□□ 2.25
LMBR1-219ENST00000498034 EP400Q96L91 3159 aa29.12■■■□□ 2.25
LMBR1-219ENST00000498034 SPATA31A5Q5VU36 1347 aa29.11■■■□□ 2.25
LMBR1-219ENST00000498034 SPATA31A7Q8IWB4 1347 aa29.11■■■□□ 2.25
LMBR1-219ENST00000498034 EVC2Q86UK5 1308 aa29.1■■■□□ 2.25
LMBR1-219ENST00000498034 BLMP54132 1417 aaPredicted RBP29.1■■■□□ 2.25
LMBR1-219ENST00000498034 NRKQ7Z2Y5 1582 aa29.07■■■□□ 2.24
LMBR1-219ENST00000498034 STRN4Q9NRL3 753 aa29.07■■■□□ 2.24
LMBR1-219ENST00000498034 USP19O94966 1318 aa29.06■■■□□ 2.24
LMBR1-219ENST00000498034 NLRP13Q86W25 1043 aa29.06■■■□□ 2.24
LMBR1-219ENST00000498034 USP6P35125 1406 aa29.04■■■□□ 2.24
LMBR1-219ENST00000498034 BRD4O60885 1362 aaPredicted RBP29.03■■■□□ 2.24
LMBR1-219ENST00000498034 DEFB132Q7Z7B7 95 aa29.03■■■□□ 2.24
LMBR1-219ENST00000498034 SPATA31A1Q5TZJ5 1347 aa29.02■■■□□ 2.24
LMBR1-219ENST00000498034 GCP02774 474 aa29.02■■■□□ 2.24
LMBR1-219ENST00000498034 SF3B2Q13435 895 aaKnown RBP29.02■■■□□ 2.24
LMBR1-219ENST00000498034 ZRANB1Q9UGI0 708 aa29.01■■■□□ 2.23
LMBR1-219ENST00000498034 CPDO75976 1380 aa29.01■■■□□ 2.23
LMBR1-219ENST00000498034 THSD7AQ9UPZ6 1657 aa29■■■□□ 2.23
LMBR1-219ENST00000498034 EVA1CP58658 441 aa29■■■□□ 2.23
LMBR1-219ENST00000498034 TONSLQ96HA7 1378 aa29■■■□□ 2.23
LMBR1-219ENST00000498034 CAMTA1Q9Y6Y1 1673 aa28.99■■■□□ 2.23
LMBR1-219ENST00000498034 NLRP6P59044 892 aa28.99■■■□□ 2.23
LMBR1-219ENST00000498034 FAM182BQ5T319 152 aa28.99■■■□□ 2.23
LMBR1-219ENST00000498034 SSH2Q76I76 1423 aa28.98■■■□□ 2.23
LMBR1-219ENST00000498034 TRIM26Q12899 539 aaPredicted RBP28.98■■■□□ 2.23
LMBR1-219ENST00000498034 CARD11Q9BXL7 1154 aa28.98■■■□□ 2.23
LMBR1-219ENST00000498034 LMO7Q8WWI1 1683 aa28.97■■■□□ 2.23
LMBR1-219ENST00000498034 USP35Q9P2H5 1018 aa28.97■■■□□ 2.23
LMBR1-219ENST00000498034 LARP1Q6PKG0 1096 aaKnown RBP28.95■■■□□ 2.22
LMBR1-219ENST00000498034 PIK3C2AO00443 1686 aa28.93■■■□□ 2.22
LMBR1-219ENST00000498034 ZBTB7CA1YPR0 619 aa28.93■■■□□ 2.22
LMBR1-219ENST00000498034 ZNF692Q9BU19 519 aaPredicted RBP28.93■■■□□ 2.22
LMBR1-219ENST00000498034 AKAP12Q02952 1782 aa28.93■■■□□ 2.22
LMBR1-219ENST00000498034 SLIT3O75094 1523 aa28.92■■■□□ 2.22
LMBR1-219ENST00000498034 TTC21BQ7Z4L5 1316 aa28.92■■■□□ 2.22
LMBR1-219ENST00000498034 SBNO2Q9Y2G9 1366 aa28.9■■■□□ 2.22
LMBR1-219ENST00000498034 BARGINQ6ZT62 677 aa28.89■■■□□ 2.22
LMBR1-219ENST00000498034 CPSF1Q10570 1443 aaKnown RBP28.88■■■□□ 2.21
LMBR1-219ENST00000498034 BAG6P46379 1132 aa28.88■■■□□ 2.21
LMBR1-219ENST00000498034 COL5A2P05997 1499 aaPredicted RBP28.88■■■□□ 2.21
LMBR1-219ENST00000498034 TCP11L2Q8N4U5 519 aa28.87■■■□□ 2.21
LMBR1-219ENST00000498034 KTN1Q86UP2 1357 aaKnown RBP28.86■■■□□ 2.21
LMBR1-219ENST00000498034 RGPD1P0DJD0 1748 aa28.86■■■□□ 2.21
LMBR1-219ENST00000498034 AATKQ6ZMQ8 1374 aa28.85■■■□□ 2.21
LMBR1-219ENST00000498034 TTC21AQ8NDW8 1320 aa28.84■■■□□ 2.21
LMBR1-219ENST00000498034 EN1Q05925 392 aaPredicted RBP28.83■■■□□ 2.21
LMBR1-219ENST00000498034 SOX12O15370 315 aa28.82■■■□□ 2.2
LMBR1-219ENST00000498034 FAM196AQ6ZSG2 479 aa28.82■■■□□ 2.2
LMBR1-219ENST00000498034 THRAP3Q9Y2W1 955 aaKnown RBP28.82■■■□□ 2.2
LMBR1-219ENST00000498034 COL18A1P39060 1754 aa28.82■■■□□ 2.2
LMBR1-219ENST00000498034 PDE3BQ13370 1112 aa28.81■■■□□ 2.2
LMBR1-219ENST00000498034 MON2Q7Z3U7 1717 aa28.8■■■□□ 2.2
LMBR1-219ENST00000498034 CRB1P82279 1406 aa28.8■■■□□ 2.2
LMBR1-219ENST00000498034 TMC1Q8TDI8 760 aa28.8■■■□□ 2.2
LMBR1-219ENST00000498034 AXIN2Q9Y2T1 843 aa28.8■■■□□ 2.2
LMBR1-219ENST00000498034 TNS1Q9HBL0 1735 aaKnown RBP28.8■■■□□ 2.2
LMBR1-219ENST00000498034 TRIM37O94972 964 aa28.79■■■□□ 2.2
LMBR1-219ENST00000498034 ARHGEF25Q86VW2 580 aa28.79■■■□□ 2.2
LMBR1-219ENST00000498034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.79■■■□□ 2.22e-6■■□□□ 12.3
LMBR1-219ENST00000498034 KCNH5Q8NCM2 988 aa28.79■■■□□ 2.2
LMBR1-219ENST00000498034 CD163L1Q9NR16 1453 aa28.78■■■□□ 2.2
LMBR1-219ENST00000498034 SLC12A5Q9H2X9 1139 aa28.78■■■□□ 2.2
LMBR1-219ENST00000498034 TOM1L2Q6ZVM7 507 aa28.76■■■□□ 2.19
LMBR1-219ENST00000498034 PARP4Q9UKK3 1724 aaKnown RBP28.74■■■□□ 2.19
LMBR1-219ENST00000498034 RGPD5Q99666 1765 aa28.74■■■□□ 2.19
LMBR1-219ENST00000498034 DISP2A7MBM2 1401 aa28.74■■■□□ 2.19
LMBR1-219ENST00000498034 NFAT5O94916 1531 aa28.74■■■□□ 2.19
LMBR1-219ENST00000498034 ST20-MTHFSA0A0A6YYL1 179 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms