RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.19
HLA-B-254ENST00000497377 SLC24A1O60721 1099 aa16.21■□□□□ 0.19
HLA-B-254ENST00000497377 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
HLA-B-254ENST00000497377 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.19
HLA-B-254ENST00000497377 COL22A1Q8NFW1 1626 aaPredicted RBP16.2■□□□□ 0.18
HLA-B-254ENST00000497377 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
HLA-B-254ENST00000497377 SBNO1A3KN83 1393 aa16.2■□□□□ 0.18
HLA-B-254ENST00000497377 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
HLA-B-254ENST00000497377 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
HLA-B-254ENST00000497377 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
HLA-B-254ENST00000497377 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
HLA-B-254ENST00000497377 NGDNQ8NEJ9 315 aaKnown RBP16.18■□□□□ 0.18
HLA-B-254ENST00000497377 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
HLA-B-254ENST00000497377 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
HLA-B-254ENST00000497377 TNS3Q68CZ2 1445 aa16.17■□□□□ 0.18
HLA-B-254ENST00000497377 LRP6O75581 1613 aa16.16■□□□□ 0.18
HLA-B-254ENST00000497377 ARHGEF10O15013 1369 aa16.16■□□□□ 0.18
HLA-B-254ENST00000497377 MEX3CQ5U5Q3 659 aaKnown RBP16.16■□□□□ 0.18
HLA-B-254ENST00000497377 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
HLA-B-254ENST00000497377 ATAD2Q6PL18 1390 aa16.15■□□□□ 0.18
HLA-B-254ENST00000497377 NUTM2BA6NNL0 878 aaPredicted RBP16.15■□□□□ 0.18
HLA-B-254ENST00000497377 NUTM2EB1AL46 878 aaPredicted RBP16.15■□□□□ 0.18
HLA-B-254ENST00000497377 PPIP5K1Q6PFW1 1433 aa16.15■□□□□ 0.18
HLA-B-254ENST00000497377 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
HLA-B-254ENST00000497377 USP47Q96K76 1375 aa16.14■□□□□ 0.17
HLA-B-254ENST00000497377 PUS7Q96PZ0 661 aaKnown RBP16.14■□□□□ 0.17
HLA-B-254ENST00000497377 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
HLA-B-254ENST00000497377 ACEP12821 1306 aa16.14■□□□□ 0.17
HLA-B-254ENST00000497377 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
HLA-B-254ENST00000497377 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
HLA-B-254ENST00000497377 ALS2Q96Q42 1657 aa16.12■□□□□ 0.17
HLA-B-254ENST00000497377 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
HLA-B-254ENST00000497377 TESK2Q96S53 571 aa16.11■□□□□ 0.17
HLA-B-254ENST00000497377 CABP1Q9NZU7 370 aa16.11■□□□□ 0.17
HLA-B-254ENST00000497377 MARF1Q9Y4F3 1742 aaKnown RBP16.09■□□□□ 0.17
HLA-B-254ENST00000497377 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
HLA-B-254ENST00000497377 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
HLA-B-254ENST00000497377 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
HLA-B-254ENST00000497377 ADAMTS2O95450 1211 aa16.08■□□□□ 0.16
HLA-B-254ENST00000497377 RGS17Q9UGC6 210 aaPredicted RBP16.08■□□□□ 0.16
HLA-B-254ENST00000497377 TMF1P82094 1093 aa16.07■□□□□ 0.16
HLA-B-254ENST00000497377 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
HLA-B-254ENST00000497377 USP6P35125 1406 aa16.07■□□□□ 0.16
HLA-B-254ENST00000497377 AKAP12Q02952 1782 aa16.06■□□□□ 0.16
HLA-B-254ENST00000497377 ABCA3Q99758 1704 aa16.06■□□□□ 0.16
HLA-B-254ENST00000497377 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
HLA-B-254ENST00000497377 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
HLA-B-254ENST00000497377 C8orf37Q96NL8 207 aa16.06■□□□□ 0.16
HLA-B-254ENST00000497377 CPSF1Q10570 1443 aaKnown RBP16.05■□□□□ 0.16
HLA-B-254ENST00000497377 AFF2P51816 1311 aa16.05■□□□□ 0.16
HLA-B-254ENST00000497377 NGLY1Q96IV0 654 aa16.05■□□□□ 0.16
HLA-B-254ENST00000497377 EIF4G2P78344 907 aaKnown RBP eCLIP16.04■□□□□ 0.16
HLA-B-254ENST00000497377 CRYBG1Q9Y4K1 1723 aa16.03■□□□□ 0.16
HLA-B-254ENST00000497377 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
HLA-B-254ENST00000497377 CABLES1Q8TDN4 633 aa16.03■□□□□ 0.16
HLA-B-254ENST00000497377 SSH2Q76I76 1423 aa16.02■□□□□ 0.16
HLA-B-254ENST00000497377 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.16
HLA-B-254ENST00000497377 ILDR2Q71H61 639 aa16.02■□□□□ 0.16
HLA-B-254ENST00000497377 HDGFL2Q7Z4V5 671 aaPredicted RBP16.02■□□□□ 0.16
HLA-B-254ENST00000497377 ABTB2Q8N961 1025 aa16.02■□□□□ 0.16
HLA-B-254ENST00000497377 TMC1Q8TDI8 760 aa16.02■□□□□ 0.16
HLA-B-254ENST00000497377 TERF2IPQ9NYB0 399 aa16.02■□□□□ 0.16
HLA-B-254ENST00000497377 KTN1Q86UP2 1357 aaKnown RBP16.01■□□□□ 0.15
HLA-B-254ENST00000497377 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
HLA-B-254ENST00000497377 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
HLA-B-254ENST00000497377 POTEAQ6S8J7 498 aa16.01■□□□□ 0.15
HLA-B-254ENST00000497377 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
HLA-B-254ENST00000497377 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
HLA-B-254ENST00000497377 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
HLA-B-254ENST00000497377 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
HLA-B-254ENST00000497377 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
HLA-B-254ENST00000497377 PHRF1Q9P1Y6 1649 aaKnown RBP16■□□□□ 0.15
HLA-B-254ENST00000497377 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
HLA-B-254ENST00000497377 USP19O94966 1318 aa15.99■□□□□ 0.15
HLA-B-254ENST00000497377 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
HLA-B-254ENST00000497377 USP21Q9UK80 565 aa15.99■□□□□ 0.15
HLA-B-254ENST00000497377 TTC21BQ7Z4L5 1316 aa15.98■□□□□ 0.15
HLA-B-254ENST00000497377 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
HLA-B-254ENST00000497377 HSPA5P11021 654 aaKnown RBP15.98■□□□□ 0.15
HLA-B-254ENST00000497377 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
HLA-B-254ENST00000497377 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.98■□□□□ 0.15
HLA-B-254ENST00000497377 NWD2Q9ULI1 1742 aa15.98■□□□□ 0.15
HLA-B-254ENST00000497377 SLIT2O94813 1529 aa15.98■□□□□ 0.15
HLA-B-254ENST00000497377 QTRT2Q9H974 415 aaKnown RBP15.97■□□□□ 0.15
HLA-B-254ENST00000497377 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
HLA-B-254ENST00000497377 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
HLA-B-254ENST00000497377 COL14A1Q05707 1796 aaKnown RBP15.97■□□□□ 0.15
HLA-B-254ENST00000497377 PLCH1Q4KWH8 1693 aa15.96■□□□□ 0.15
HLA-B-254ENST00000497377 RXRBP28702 533 aa15.96■□□□□ 0.15
HLA-B-254ENST00000497377 NLRP6P59044 892 aa15.96■□□□□ 0.15
HLA-B-254ENST00000497377 NUTM2GQ5VZR2 741 aa15.96■□□□□ 0.15
HLA-B-254ENST00000497377 A0A1W2PP64 1363 aa15.96■□□□□ 0.15
HLA-B-254ENST00000497377 ANKRD36BQ8N2N9 1353 aa15.96■□□□□ 0.15
HLA-B-254ENST00000497377 BCL9LQ86UU0 1499 aa15.96■□□□□ 0.14
HLA-B-254ENST00000497377 FAM83GA6ND36 823 aa15.95■□□□□ 0.14
HLA-B-254ENST00000497377 UNC5CLQ8IV45 518 aa15.95■□□□□ 0.14
HLA-B-254ENST00000497377 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
HLA-B-254ENST00000497377 ATRNO75882 1429 aa15.94■□□□□ 0.14
HLA-B-254ENST00000497377 SLIT3O75094 1523 aa15.94■□□□□ 0.14
HLA-B-254ENST00000497377 GCP02774 474 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms