RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 TTC21BQ7Z4L5 1316 aa9.85□□□□□ -0.83
GPATCH4-208ENST00000497287 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
GPATCH4-208ENST00000497287 USP6P35125 1406 aa9.85□□□□□ -0.83
GPATCH4-208ENST00000497287 GGNBP2Q9H3C7 697 aa9.85□□□□□ -0.83
GPATCH4-208ENST00000497287 C1orf167Q5SNV9 1468 aa9.85□□□□□ -0.83
GPATCH4-208ENST00000497287 KIF20BQ96Q89 1820 aa9.84□□□□□ -0.83
GPATCH4-208ENST00000497287 CCDC184Q52MB2 194 aa9.84□□□□□ -0.83
GPATCH4-208ENST00000497287 COG3Q96JB2 828 aa9.84□□□□□ -0.83
GPATCH4-208ENST00000497287 MST1RQ04912 1400 aa9.83□□□□□ -0.84
GPATCH4-208ENST00000497287 PSME1Q06323 249 aa9.83□□□□□ -0.84
GPATCH4-208ENST00000497287 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 ANKRD26Q9UPS8 1709 aa9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 TNNT2P45379 298 aaPredicted RBP9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 NME9Q86XW9 330 aa9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 FAM9BQ8IZU0 186 aa9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 YTHDC1Q96MU7 727 aaKnown RBP9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 ORAI2Q96SN7 254 aa9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
GPATCH4-208ENST00000497287 KIF1AQ12756 1690 aa9.81□□□□□ -0.84
GPATCH4-208ENST00000497287 NRKQ7Z2Y5 1582 aa9.81□□□□□ -0.84
GPATCH4-208ENST00000497287 PIP4K2BP78356 416 aa9.81□□□□□ -0.84
GPATCH4-208ENST00000497287 PNISRQ8TF01 805 aaKnown RBP9.81□□□□□ -0.84
GPATCH4-208ENST00000497287 CFAP53Q96M91 514 aa9.81□□□□□ -0.84
GPATCH4-208ENST00000497287 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
GPATCH4-208ENST00000497287 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 FOXO3O43524 673 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 TOM1O60784 492 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 MTHFSP49914 203 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 KRT28Q7Z3Y7 464 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 ABTB2Q8N961 1025 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 SLAIN2Q9P270 581 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 NPHP3Q7Z494 1330 aa9.79□□□□□ -0.84
GPATCH4-208ENST00000497287 AATKQ6ZMQ8 1374 aa9.78□□□□□ -0.84
GPATCH4-208ENST00000497287 NLRP6P59044 892 aa9.78□□□□□ -0.84
GPATCH4-208ENST00000497287 WDR43Q15061 677 aaKnown RBP eCLIP9.78□□□□□ -0.84
GPATCH4-208ENST00000497287 OVOS2A0A0J9YW53 1432 aa9.78□□□□□ -0.84
GPATCH4-208ENST00000497287 OVOS2Q6IE36 1432 aa9.78□□□□□ -0.84
GPATCH4-208ENST00000497287 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
GPATCH4-208ENST00000497287 BRINP3Q76B58 766 aa9.76□□□□□ -0.85
GPATCH4-208ENST00000497287 POLKQ9UBT6 870 aa9.76□□□□□ -0.85
GPATCH4-208ENST00000497287 SBNO1A3KN83 1393 aa9.75□□□□□ -0.85
GPATCH4-208ENST00000497287 INSRP06213 1382 aa9.75□□□□□ -0.85
GPATCH4-208ENST00000497287 PIK3C2AO00443 1686 aa9.75□□□□□ -0.85
GPATCH4-208ENST00000497287 XPCQ01831 940 aaPredicted RBP9.75□□□□□ -0.85
GPATCH4-208ENST00000497287 NUDCQ9Y266 331 aa9.75□□□□□ -0.85
GPATCH4-208ENST00000497287 MAP2P11137 1827 aaKnown RBP9.75□□□□□ -0.85
GPATCH4-208ENST00000497287 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 PPM1GO15355 546 aaPredicted RBP9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 HSPA1LP34931 641 aa9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 HNRNPUQ00839 825 aaKnown RBP eCLIP9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 NUTM2GQ5VZR2 741 aa9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 LMOD2Q6P5Q4 547 aa9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 KCNH5Q8NCM2 988 aa9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 PNPLA6Q8IY17 1366 aa9.74□□□□□ -0.85
GPATCH4-208ENST00000497287 SMG6Q86US8 1419 aaKnown RBP9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 TRPM3Q9HCF6 1732 aaPredicted RBP9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 FBLN1P23142 703 aa9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 RRS1Q15050 365 aaKnown RBP9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 ADAMTS8Q9UP79 889 aa9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
GPATCH4-208ENST00000497287 SOX12O15370 315 aa9.72□□□□□ -0.85
GPATCH4-208ENST00000497287 DDX17Q92841 729 aaKnown RBP9.72□□□□□ -0.85
GPATCH4-208ENST00000497287 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
GPATCH4-208ENST00000497287 TNS3Q68CZ2 1445 aa9.72□□□□□ -0.85
GPATCH4-208ENST00000497287 PXDNQ92626 1479 aa9.72□□□□□ -0.85
GPATCH4-208ENST00000497287 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
GPATCH4-208ENST00000497287 AMPHP49418 695 aa9.71□□□□□ -0.86
GPATCH4-208ENST00000497287 PNNQ9H307 717 aaKnown RBP9.71□□□□□ -0.86
GPATCH4-208ENST00000497287 SOS2Q07890 1332 aaPredicted RBP9.71□□□□□ -0.86
GPATCH4-208ENST00000497287 SPATA31A3Q5VYP0 1347 aa9.71□□□□□ -0.86
GPATCH4-208ENST00000497287 KIF24Q5T7B8 1368 aa9.71□□□□□ -0.86
GPATCH4-208ENST00000497287 COL3A1P02461 1466 aaPredicted RBP9.71□□□□□ -0.86
GPATCH4-208ENST00000497287 U2SURPO15042 1029 aaKnown RBP9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 U2AF1L5P0DN76 240 aaPredicted RBP9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 U2AF1Q01081 240 aaKnown RBP eCLIP9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 USP19O94966 1318 aa9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 FLT4P35916 1363 aa9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 BLMP54132 1417 aaPredicted RBP9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 ALS2Q96Q42 1657 aa9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 MARF1Q9Y4F3 1742 aaKnown RBP9.7□□□□□ -0.86
GPATCH4-208ENST00000497287 RTL1A6NKG5 1358 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 SLIT3O75094 1523 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 GCP02774 474 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 IL13P35225 146 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 ZBED9Q6R2W3 1325 aa9.69□□□□□ -0.86
GPATCH4-208ENST00000497287 NFAT5O94916 1531 aa9.68□□□□□ -0.86
GPATCH4-208ENST00000497287 RUNDC1Q96C34 613 aa9.68□□□□□ -0.86
GPATCH4-208ENST00000497287 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
GPATCH4-208ENST00000497287 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
GPATCH4-208ENST00000497287 FCHSD2O94868 740 aa9.67□□□□□ -0.86
GPATCH4-208ENST00000497287 NEFMP07197 916 aa9.67□□□□□ -0.86
GPATCH4-208ENST00000497287 HOXC9P31274 260 aa9.67□□□□□ -0.86
GPATCH4-208ENST00000497287 EIF4A2Q14240 407 aaKnown RBP9.67□□□□□ -0.86
GPATCH4-208ENST00000497287 HSP90AB2PQ58FF8 381 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms