RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 COL22A1Q8NFW1 1626 aaPredicted RBP20.08■□□□□ 0.8
USP11-212ENST00000497179 CCDC7Q96M83 1385 aa20.08■□□□□ 0.8
USP11-212ENST00000497179 JCADQ9P266 1359 aa20.08■□□□□ 0.8
USP11-212ENST00000497179 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
USP11-212ENST00000497179 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
USP11-212ENST00000497179 KTN1Q86UP2 1357 aaKnown RBP20.07■□□□□ 0.8
USP11-212ENST00000497179 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
USP11-212ENST00000497179 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
USP11-212ENST00000497179 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
USP11-212ENST00000497179 ARHGEF10O15013 1369 aa20.05■□□□□ 0.8
USP11-212ENST00000497179 EDC4Q6P2E9 1401 aaKnown RBP20.04■□□□□ 0.8
USP11-212ENST00000497179 MED1Q15648 1581 aaPredicted RBP20.03■□□□□ 0.8
USP11-212ENST00000497179 PIK3C2AO00443 1686 aa20.02■□□□□ 0.8
USP11-212ENST00000497179 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.79
USP11-212ENST00000497179 PAK3O75914 559 aaPredicted RBP20.01■□□□□ 0.79
USP11-212ENST00000497179 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
USP11-212ENST00000497179 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
USP11-212ENST00000497179 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
USP11-212ENST00000497179 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
USP11-212ENST00000497179 USP54Q70EL1 1684 aa19.98■□□□□ 0.79
USP11-212ENST00000497179 NSD3Q9BZ95 1437 aa19.97■□□□□ 0.79
USP11-212ENST00000497179 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
USP11-212ENST00000497179 PHRF1Q9P1Y6 1649 aaKnown RBP19.96■□□□□ 0.79
USP11-212ENST00000497179 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
USP11-212ENST00000497179 LRP6O75581 1613 aa19.95■□□□□ 0.78
USP11-212ENST00000497179 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
USP11-212ENST00000497179 PANK3Q9H999 370 aa19.95■□□□□ 0.78
USP11-212ENST00000497179 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
USP11-212ENST00000497179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.94■□□□□ 0.78
USP11-212ENST00000497179 USP19O94966 1318 aa19.94■□□□□ 0.78
USP11-212ENST00000497179 USP31Q70CQ4 1352 aa19.94■□□□□ 0.78
USP11-212ENST00000497179 KIF20BQ96Q89 1820 aa19.93■□□□□ 0.78
USP11-212ENST00000497179 SLIT3O75094 1523 aa19.93■□□□□ 0.78
USP11-212ENST00000497179 NUTM2GQ5VZR2 741 aa19.92■□□□□ 0.78
USP11-212ENST00000497179 NME9Q86XW9 330 aa19.92■□□□□ 0.78
USP11-212ENST00000497179 OVOS2A0A0J9YW53 1432 aa19.92■□□□□ 0.78
USP11-212ENST00000497179 OVOS2Q6IE36 1432 aa19.92■□□□□ 0.78
USP11-212ENST00000497179 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
USP11-212ENST00000497179 NLRP6P59044 892 aa19.9■□□□□ 0.78
USP11-212ENST00000497179 CABLES1Q8TDN4 633 aa19.9■□□□□ 0.78
USP11-212ENST00000497179 CGNL1Q0VF96 1302 aa19.88■□□□□ 0.77
USP11-212ENST00000497179 NUTM2BA6NNL0 878 aaPredicted RBP19.88■□□□□ 0.77
USP11-212ENST00000497179 NUTM2EB1AL46 878 aaPredicted RBP19.88■□□□□ 0.77
USP11-212ENST00000497179 NUTM2AQ8IVF1 878 aaPredicted RBP19.88■□□□□ 0.77
USP11-212ENST00000497179 ZRANB1Q9UGI0 708 aa19.88■□□□□ 0.77
USP11-212ENST00000497179 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
USP11-212ENST00000497179 FYB1O15117 783 aa19.87■□□□□ 0.77
USP11-212ENST00000497179 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
USP11-212ENST00000497179 NFAT5O94916 1531 aa19.86■□□□□ 0.77
USP11-212ENST00000497179 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
USP11-212ENST00000497179 NSD2O96028 1365 aa19.85■□□□□ 0.77
USP11-212ENST00000497179 HAP1P54257 671 aaPredicted RBP19.85■□□□□ 0.77
USP11-212ENST00000497179 PER1O15534 1290 aaPredicted RBP19.84■□□□□ 0.77
USP11-212ENST00000497179 COG3Q96JB2 828 aa19.84■□□□□ 0.77
USP11-212ENST00000497179 GGNBP2Q9H3C7 697 aa19.84■□□□□ 0.77
USP11-212ENST00000497179 KNSTRNQ9Y448 316 aa19.84■□□□□ 0.77
USP11-212ENST00000497179 ADAMTS2O95450 1211 aa19.83■□□□□ 0.77
USP11-212ENST00000497179 GCP02774 474 aa19.83■□□□□ 0.77
USP11-212ENST00000497179 CPDO75976 1380 aa19.83■□□□□ 0.76
USP11-212ENST00000497179 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
USP11-212ENST00000497179 COL14A1Q05707 1796 aaKnown RBP19.81■□□□□ 0.76
USP11-212ENST00000497179 AMER1Q5JTC6 1135 aaPredicted RBP19.81■□□□□ 0.76
USP11-212ENST00000497179 MEX3CQ5U5Q3 659 aaKnown RBP19.81■□□□□ 0.76
USP11-212ENST00000497179 KIAA0232Q92628 1395 aa19.81■□□□□ 0.76
USP11-212ENST00000497179 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
USP11-212ENST00000497179 PLCH1Q4KWH8 1693 aa19.79■□□□□ 0.76
USP11-212ENST00000497179 ABCC6O95255 1503 aa19.78■□□□□ 0.76
USP11-212ENST00000497179 ZC3H6P61129 1189 aaKnown RBP19.78■□□□□ 0.76
USP11-212ENST00000497179 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
USP11-212ENST00000497179 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
USP11-212ENST00000497179 SLIT2O94813 1529 aa19.77■□□□□ 0.76
USP11-212ENST00000497179 NWD2Q9ULI1 1742 aa19.77■□□□□ 0.76
USP11-212ENST00000497179 C8orf37Q96NL8 207 aa19.77■□□□□ 0.76
USP11-212ENST00000497179 PRDM11Q9NQV5 511 aa19.77■□□□□ 0.76
USP11-212ENST00000497179 LTN1O94822 1766 aa19.76■□□□□ 0.75
USP11-212ENST00000497179 SOX12O15370 315 aa19.76■□□□□ 0.75
USP11-212ENST00000497179 ARHGEF25Q86VW2 580 aa19.76■□□□□ 0.75
USP11-212ENST00000497179 AATKQ6ZMQ8 1374 aa19.75■□□□□ 0.75
USP11-212ENST00000497179 FAM83GA6ND36 823 aa19.75■□□□□ 0.75
USP11-212ENST00000497179 COL18A1P39060 1754 aa19.75■□□□□ 0.75
USP11-212ENST00000497179 NRAPQ86VF7 1730 aa19.74■□□□□ 0.75
USP11-212ENST00000497179 FNBP4Q8N3X1 1017 aaPredicted RBP19.74■□□□□ 0.75
USP11-212ENST00000497179 NGLY1Q96IV0 654 aa19.74■□□□□ 0.75
USP11-212ENST00000497179 AFF2P51816 1311 aa19.74■□□□□ 0.75
USP11-212ENST00000497179 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.73■□□□□ 0.75
USP11-212ENST00000497179 CHRNA2Q15822 529 aa19.73■□□□□ 0.75
USP11-212ENST00000497179 MORC1Q86VD1 984 aa19.72■□□□□ 0.75
USP11-212ENST00000497179 BCL9LQ86UU0 1499 aa19.72■□□□□ 0.75
USP11-212ENST00000497179 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
USP11-212ENST00000497179 CAMTA1Q9Y6Y1 1673 aa19.71■□□□□ 0.75
USP11-212ENST00000497179 MAP3K19Q56UN5 1328 aa19.71■□□□□ 0.75
USP11-212ENST00000497179 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
USP11-212ENST00000497179 ZBTB7CA1YPR0 619 aa19.7■□□□□ 0.74
USP11-212ENST00000497179 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
USP11-212ENST00000497179 KIF24Q5T7B8 1368 aa19.7■□□□□ 0.74
USP11-212ENST00000497179 SMG6Q86US8 1419 aaKnown RBP19.69■□□□□ 0.74
USP11-212ENST00000497179 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
USP11-212ENST00000497179 FBLN1P23142 703 aa19.69■□□□□ 0.74
USP11-212ENST00000497179 BTG4Q9NY30 223 aa19.69■□□□□ 0.74
USP11-212ENST00000497179 COL5A2P05997 1499 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms