RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
HDLBP-246ENST00000496569 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
HDLBP-246ENST00000496569 ACEP12821 1306 aa17.49■□□□□ 0.39
HDLBP-246ENST00000496569 GLI3P10071 1580 aa17.49■□□□□ 0.39
HDLBP-246ENST00000496569 PPIP5K1Q6PFW1 1433 aa17.49■□□□□ 0.39
HDLBP-246ENST00000496569 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
HDLBP-246ENST00000496569 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
HDLBP-246ENST00000496569 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
HDLBP-246ENST00000496569 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
HDLBP-246ENST00000496569 AKAP12Q02952 1782 aa17.46■□□□□ 0.39
HDLBP-246ENST00000496569 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
HDLBP-246ENST00000496569 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
HDLBP-246ENST00000496569 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
HDLBP-246ENST00000496569 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
HDLBP-246ENST00000496569 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
HDLBP-246ENST00000496569 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
HDLBP-246ENST00000496569 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
HDLBP-246ENST00000496569 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
HDLBP-246ENST00000496569 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
HDLBP-246ENST00000496569 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
HDLBP-246ENST00000496569 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
HDLBP-246ENST00000496569 UPF1Q92900 1129 aaKnown RBP eCLIP17.41■□□□□ 0.38
HDLBP-246ENST00000496569 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
HDLBP-246ENST00000496569 EP400Q96L91 3159 aa17.4■□□□□ 0.38
HDLBP-246ENST00000496569 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-246ENST00000496569 USP6P35125 1406 aa17.39■□□□□ 0.38
HDLBP-246ENST00000496569 MON2Q7Z3U7 1717 aa17.39■□□□□ 0.37
HDLBP-246ENST00000496569 CHRNA2Q15822 529 aa17.39■□□□□ 0.37
HDLBP-246ENST00000496569 ZC3H6P61129 1189 aaKnown RBP17.38■□□□□ 0.37
HDLBP-246ENST00000496569 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
HDLBP-246ENST00000496569 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
HDLBP-246ENST00000496569 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
HDLBP-246ENST00000496569 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
HDLBP-246ENST00000496569 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
HDLBP-246ENST00000496569 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
HDLBP-246ENST00000496569 LMO7Q8WWI1 1683 aa17.35■□□□□ 0.37
HDLBP-246ENST00000496569 USP19O94966 1318 aa17.34■□□□□ 0.37
HDLBP-246ENST00000496569 VPS72Q15906 364 aa17.34■□□□□ 0.37
HDLBP-246ENST00000496569 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
HDLBP-246ENST00000496569 RGPD5Q99666 1765 aa17.34■□□□□ 0.37
HDLBP-246ENST00000496569 SLIT3O75094 1523 aa17.32■□□□□ 0.36
HDLBP-246ENST00000496569 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
HDLBP-246ENST00000496569 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
HDLBP-246ENST00000496569 CAMTA1Q9Y6Y1 1673 aa17.32■□□□□ 0.36
HDLBP-246ENST00000496569 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
HDLBP-246ENST00000496569 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
HDLBP-246ENST00000496569 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
HDLBP-246ENST00000496569 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
HDLBP-246ENST00000496569 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
HDLBP-246ENST00000496569 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 A0A0G2JS52 829 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 NLRP6P59044 892 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 MYT1Q01538 1121 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
HDLBP-246ENST00000496569 TESK2Q96S53 571 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 COL18A1P39060 1754 aa17.29■□□□□ 0.36
HDLBP-246ENST00000496569 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
HDLBP-246ENST00000496569 USP47Q96K76 1375 aa17.28■□□□□ 0.36
HDLBP-246ENST00000496569 SOX12O15370 315 aa17.28■□□□□ 0.36
HDLBP-246ENST00000496569 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
HDLBP-246ENST00000496569 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
HDLBP-246ENST00000496569 GCP02774 474 aa17.27■□□□□ 0.36
HDLBP-246ENST00000496569 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
HDLBP-246ENST00000496569 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
HDLBP-246ENST00000496569 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
HDLBP-246ENST00000496569 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
HDLBP-246ENST00000496569 CPDO75976 1380 aa17.26■□□□□ 0.35
HDLBP-246ENST00000496569 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
HDLBP-246ENST00000496569 LTN1O94822 1766 aa17.25■□□□□ 0.35
HDLBP-246ENST00000496569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■□□□ 13.4
HDLBP-246ENST00000496569 A0A1W2PP64 1363 aa17.25■□□□□ 0.35
HDLBP-246ENST00000496569 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
HDLBP-246ENST00000496569 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-246ENST00000496569 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
HDLBP-246ENST00000496569 NFAT5O94916 1531 aa17.24■□□□□ 0.35
HDLBP-246ENST00000496569 COL5A2P05997 1499 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-246ENST00000496569 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
HDLBP-246ENST00000496569 NME9Q86XW9 330 aa17.23■□□□□ 0.35
HDLBP-246ENST00000496569 WNK3Q9BYP7 1800 aa17.23■□□□□ 0.35
HDLBP-246ENST00000496569 MYOM1P52179 1685 aa17.23■□□□□ 0.35
HDLBP-246ENST00000496569 SPATA31A1Q5TZJ5 1347 aa17.22■□□□□ 0.35
HDLBP-246ENST00000496569 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-246ENST00000496569 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-246ENST00000496569 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.35
HDLBP-246ENST00000496569 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
HDLBP-246ENST00000496569 EVA1CP58658 441 aa17.2■□□□□ 0.34
HDLBP-246ENST00000496569 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
HDLBP-246ENST00000496569 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
HDLBP-246ENST00000496569 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
HDLBP-246ENST00000496569 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-246ENST00000496569 AXIN2Q9Y2T1 843 aa17.18■□□□□ 0.34
HDLBP-246ENST00000496569 PARP4Q9UKK3 1724 aaKnown RBP17.17■□□□□ 0.34
HDLBP-246ENST00000496569 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
HDLBP-246ENST00000496569 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
HDLBP-246ENST00000496569 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
HDLBP-246ENST00000496569 RGPD1P0DJD0 1748 aa17.16■□□□□ 0.34
HDLBP-246ENST00000496569 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
HDLBP-246ENST00000496569 LRRC37A3O60309 1634 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms