RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 POLKQ9UBT6 870 aa18.1■□□□□ 0.49
SPTBN1-205ENST00000496323 MON2Q7Z3U7 1717 aa18.1■□□□□ 0.49
SPTBN1-205ENST00000496323 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
SPTBN1-205ENST00000496323 RUNDC1Q96C34 613 aa18.08■□□□□ 0.49
SPTBN1-205ENST00000496323 USP6P35125 1406 aa18.08■□□□□ 0.49
SPTBN1-205ENST00000496323 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.48
SPTBN1-205ENST00000496323 RBM33Q96EV2 1170 aaKnown RBP18.08■□□□□ 0.48
SPTBN1-205ENST00000496323 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
SPTBN1-205ENST00000496323 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
SPTBN1-205ENST00000496323 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.482e-11■□□□□ 8.9
SPTBN1-205ENST00000496323 COG3Q96JB2 828 aa18.07■□□□□ 0.48
SPTBN1-205ENST00000496323 SSH2Q76I76 1423 aa18.07■□□□□ 0.48
SPTBN1-205ENST00000496323 CHD2O14647 1828 aaKnown RBP18.06■□□□□ 0.48
SPTBN1-205ENST00000496323 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
SPTBN1-205ENST00000496323 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
SPTBN1-205ENST00000496323 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
SPTBN1-205ENST00000496323 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
SPTBN1-205ENST00000496323 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
SPTBN1-205ENST00000496323 RCAN3Q9UKA8 241 aa18.05■□□□□ 0.48
SPTBN1-205ENST00000496323 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
SPTBN1-205ENST00000496323 NRKQ7Z2Y5 1582 aa18.05■□□□□ 0.48
SPTBN1-205ENST00000496323 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
SPTBN1-205ENST00000496323 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
SPTBN1-205ENST00000496323 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
SPTBN1-205ENST00000496323 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
SPTBN1-205ENST00000496323 DIAPH1O60610 1272 aaKnown RBP18.04■□□□□ 0.48
SPTBN1-205ENST00000496323 ERICH6BQ5W0A0 696 aa18.04■□□□□ 0.48
SPTBN1-205ENST00000496323 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
SPTBN1-205ENST00000496323 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
SPTBN1-205ENST00000496323 PPM1GO15355 546 aaPredicted RBP18.03■□□□□ 0.48
SPTBN1-205ENST00000496323 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
SPTBN1-205ENST00000496323 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
SPTBN1-205ENST00000496323 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
SPTBN1-205ENST00000496323 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
SPTBN1-205ENST00000496323 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
SPTBN1-205ENST00000496323 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
SPTBN1-205ENST00000496323 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
SPTBN1-205ENST00000496323 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.48
SPTBN1-205ENST00000496323 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
SPTBN1-205ENST00000496323 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
SPTBN1-205ENST00000496323 ADGRL3Q9HAR2 1447 aa18.01■□□□□ 0.47
SPTBN1-205ENST00000496323 KDM4FA0A1W2PPD8 638 aa18■□□□□ 0.47
SPTBN1-205ENST00000496323 NEUROD2Q15784 382 aa18■□□□□ 0.47
SPTBN1-205ENST00000496323 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
SPTBN1-205ENST00000496323 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
SPTBN1-205ENST00000496323 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
SPTBN1-205ENST00000496323 RRP1P56182 461 aaKnown RBP17.99■□□□□ 0.47
SPTBN1-205ENST00000496323 IL13P35225 146 aa17.98■□□□□ 0.47
SPTBN1-205ENST00000496323 USP31Q70CQ4 1352 aa17.98■□□□□ 0.47
SPTBN1-205ENST00000496323 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
SPTBN1-205ENST00000496323 NWD1Q149M9 1564 aa17.98■□□□□ 0.47
SPTBN1-205ENST00000496323 CCDC27Q2M243 656 aa17.98■□□□□ 0.47
SPTBN1-205ENST00000496323 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
SPTBN1-205ENST00000496323 E9PSI1 815 aa17.97■□□□□ 0.47
SPTBN1-205ENST00000496323 RGPD8O14715 1765 aaPredicted RBP17.97■□□□□ 0.47
SPTBN1-205ENST00000496323 HSPA2P54652 639 aa17.96■□□□□ 0.47
SPTBN1-205ENST00000496323 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
SPTBN1-205ENST00000496323 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
SPTBN1-205ENST00000496323 FCHSD2O94868 740 aa17.95■□□□□ 0.46
SPTBN1-205ENST00000496323 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
SPTBN1-205ENST00000496323 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
SPTBN1-205ENST00000496323 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
SPTBN1-205ENST00000496323 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
SPTBN1-205ENST00000496323 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
SPTBN1-205ENST00000496323 MAP2P11137 1827 aaKnown RBP17.92■□□□□ 0.46
SPTBN1-205ENST00000496323 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
SPTBN1-205ENST00000496323 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
SPTBN1-205ENST00000496323 HMOX1P09601 288 aa17.91■□□□□ 0.46
SPTBN1-205ENST00000496323 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
SPTBN1-205ENST00000496323 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
SPTBN1-205ENST00000496323 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
SPTBN1-205ENST00000496323 LRRC7Q96NW7 1537 aa17.9■□□□□ 0.46
SPTBN1-205ENST00000496323 SOX12O15370 315 aa17.9■□□□□ 0.46
SPTBN1-205ENST00000496323 PIK3C2AO00443 1686 aa17.9■□□□□ 0.46
SPTBN1-205ENST00000496323 PLIN1O60240 522 aa17.9■□□□□ 0.46
SPTBN1-205ENST00000496323 NLRP6P59044 892 aa17.9■□□□□ 0.46
SPTBN1-205ENST00000496323 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
SPTBN1-205ENST00000496323 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
SPTBN1-205ENST00000496323 MAP3K19Q56UN5 1328 aa17.89■□□□□ 0.45
SPTBN1-205ENST00000496323 HSP90AB2PQ58FF8 381 aa17.88■□□□□ 0.45
SPTBN1-205ENST00000496323 ORAI2Q96SN7 254 aa17.88■□□□□ 0.45
SPTBN1-205ENST00000496323 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
SPTBN1-205ENST00000496323 B4GALNT3Q6L9W6 998 aa17.88■□□□□ 0.45
SPTBN1-205ENST00000496323 LMTK3Q96Q04 1460 aa17.88■□□□□ 0.45
SPTBN1-205ENST00000496323 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
SPTBN1-205ENST00000496323 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
SPTBN1-205ENST00000496323 C19orf44Q9H6X5 657 aa17.87■□□□□ 0.45
SPTBN1-205ENST00000496323 RIPK4P57078 832 aa17.87■□□□□ 0.45
SPTBN1-205ENST00000496323 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
SPTBN1-205ENST00000496323 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
SPTBN1-205ENST00000496323 PSME1Q06323 249 aa17.85■□□□□ 0.45
SPTBN1-205ENST00000496323 EXOC6Q8TAG9 804 aa17.85■□□□□ 0.45
SPTBN1-205ENST00000496323 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
SPTBN1-205ENST00000496323 SBNO1A3KN83 1393 aa17.84■□□□□ 0.45
SPTBN1-205ENST00000496323 FOXO3O43524 673 aa17.83■□□□□ 0.45
SPTBN1-205ENST00000496323 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.45
SPTBN1-205ENST00000496323 C1orf167Q5SNV9 1468 aa17.83■□□□□ 0.45
SPTBN1-205ENST00000496323 FLT4P35916 1363 aa17.83■□□□□ 0.44
SPTBN1-205ENST00000496323 NFE2L2Q16236 605 aa17.83■□□□□ 0.44
SPTBN1-205ENST00000496323 C20orf194Q5TEA3 1177 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms