RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 CTHP32929 405 aa11.77□□□□□ -0.53
CLTC-208ENST00000496076 LYPD8Q6UX82 237 aa11.77□□□□□ -0.53
CLTC-208ENST00000496076 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
CLTC-208ENST00000496076 SPTLC1O15269 473 aa11.75□□□□□ -0.53
CLTC-208ENST00000496076 INSM1Q01101 510 aaPredicted RBP11.75□□□□□ -0.53
CLTC-208ENST00000496076 CFAP99D6REC4 459 aa11.74□□□□□ -0.53
CLTC-208ENST00000496076 MPNDQ8N594 471 aa11.74□□□□□ -0.53
CLTC-208ENST00000496076 HRCP23327 699 aa11.73□□□□□ -0.53
CLTC-208ENST00000496076 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
CLTC-208ENST00000496076 AK7Q96M32 723 aa11.73□□□□□ -0.53
CLTC-208ENST00000496076 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
CLTC-208ENST00000496076 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
CLTC-208ENST00000496076 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
CLTC-208ENST00000496076 NNTQ13423 1086 aa11.72□□□□□ -0.53
CLTC-208ENST00000496076 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
CLTC-208ENST00000496076 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
CLTC-208ENST00000496076 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
CLTC-208ENST00000496076 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
CLTC-208ENST00000496076 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
CLTC-208ENST00000496076 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
CLTC-208ENST00000496076 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
CLTC-208ENST00000496076 F12P00748 615 aaPredicted RBP11.68□□□□□ -0.54
CLTC-208ENST00000496076 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
CLTC-208ENST00000496076 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
CLTC-208ENST00000496076 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
CLTC-208ENST00000496076 ADH1CP00326 375 aa11.65□□□□□ -0.54
CLTC-208ENST00000496076 TIMP2P16035 220 aa11.65□□□□□ -0.54
CLTC-208ENST00000496076 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
CLTC-208ENST00000496076 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
CLTC-208ENST00000496076 VEGFBP49765 207 aa11.64□□□□□ -0.55
CLTC-208ENST00000496076 NPAS3Q8IXF0 933 aa11.64□□□□□ -0.55
CLTC-208ENST00000496076 CDK15Q96Q40 435 aa11.64□□□□□ -0.55
CLTC-208ENST00000496076 KLF16Q9BXK1 252 aaPredicted RBP11.64□□□□□ -0.55
CLTC-208ENST00000496076 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
CLTC-208ENST00000496076 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
CLTC-208ENST00000496076 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
CLTC-208ENST00000496076 PDE4DQ08499 809 aa11.63□□□□□ -0.55
CLTC-208ENST00000496076 AGERQ15109 404 aa11.63□□□□□ -0.55
CLTC-208ENST00000496076 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
CLTC-208ENST00000496076 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
CLTC-208ENST00000496076 TSC1Q92574 1164 aa11.63□□□□□ -0.55
CLTC-208ENST00000496076 GMPRP36959 345 aa11.62□□□□□ -0.55
CLTC-208ENST00000496076 SCARF1Q14162 830 aa11.62□□□□□ -0.55
CLTC-208ENST00000496076 QPCTQ16769 361 aa11.62□□□□□ -0.55
CLTC-208ENST00000496076 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
CLTC-208ENST00000496076 IRF7Q92985 503 aa11.62□□□□□ -0.55
CLTC-208ENST00000496076 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
CLTC-208ENST00000496076 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
CLTC-208ENST00000496076 H3BM21 787 aa11.6□□□□□ -0.55
CLTC-208ENST00000496076 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
CLTC-208ENST00000496076 LILRB3O75022 631 aa11.59□□□□□ -0.55
CLTC-208ENST00000496076 TUSC1Q2TAM9 212 aa11.59□□□□□ -0.55
CLTC-208ENST00000496076 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
CLTC-208ENST00000496076 GRM5P41594 1212 aa11.58□□□□□ -0.56
CLTC-208ENST00000496076 NR5A1Q13285 461 aa11.58□□□□□ -0.56
CLTC-208ENST00000496076 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
CLTC-208ENST00000496076 NR3C2P08235 984 aa11.57□□□□□ -0.56
CLTC-208ENST00000496076 ITPKCQ96DU7 683 aa11.57□□□□□ -0.56
CLTC-208ENST00000496076 SLC24A3Q9HC58 644 aa11.57□□□□□ -0.56
CLTC-208ENST00000496076 SOBPA7XYQ1 873 aa11.56□□□□□ -0.56
CLTC-208ENST00000496076 ARMC2Q8NEN0 867 aa11.56□□□□□ -0.56
CLTC-208ENST00000496076 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
CLTC-208ENST00000496076 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
CLTC-208ENST00000496076 C6orf118Q5T5N4 469 aa11.53□□□□□ -0.56
CLTC-208ENST00000496076 ZSCAN1Q8NBB4 408 aa11.53□□□□□ -0.56
CLTC-208ENST00000496076 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
CLTC-208ENST00000496076 FAM181BA6NEQ2 426 aa11.52□□□□□ -0.57
CLTC-208ENST00000496076 LORP23490 312 aaPredicted RBP11.52□□□□□ -0.57
CLTC-208ENST00000496076 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
CLTC-208ENST00000496076 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
CLTC-208ENST00000496076 NBPF14Q5TI25 921 aa11.51□□□□□ -0.57
CLTC-208ENST00000496076 C1QTNF2Q9BXJ5 285 aa11.51□□□□□ -0.57
CLTC-208ENST00000496076 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
CLTC-208ENST00000496076 MAN1A2O60476 641 aa11.5□□□□□ -0.57
CLTC-208ENST00000496076 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
CLTC-208ENST00000496076 MAGEB6P1A0A0J9YX57 407 aa11.49□□□□□ -0.57
CLTC-208ENST00000496076 SH3BP5LQ7L8J4 393 aa11.49□□□□□ -0.57
CLTC-208ENST00000496076 UPP2O95045 317 aa11.48□□□□□ -0.57
CLTC-208ENST00000496076 BMP2P12643 396 aa11.48□□□□□ -0.57
CLTC-208ENST00000496076 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
CLTC-208ENST00000496076 FSHRP23945 695 aa11.47□□□□□ -0.57
CLTC-208ENST00000496076 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
CLTC-208ENST00000496076 MEIOBQ8N635 442 aa11.47□□□□□ -0.57
CLTC-208ENST00000496076 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
CLTC-208ENST00000496076 LINC00528Q8N1L1 170 aa11.46□□□□□ -0.57
CLTC-208ENST00000496076 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
CLTC-208ENST00000496076 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
CLTC-208ENST00000496076 VSIG8P0DPA2 414 aa11.44□□□□□ -0.58
CLTC-208ENST00000496076 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CLTC-208ENST00000496076 CCDC116Q8IYX3 515 aa11.43□□□□□ -0.58
CLTC-208ENST00000496076 EMILIN1Q9Y6C2 1016 aa11.43□□□□□ -0.58
CLTC-208ENST00000496076 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
CLTC-208ENST00000496076 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
CLTC-208ENST00000496076 PPFIA3O75145 1194 aa11.41□□□□□ -0.58
CLTC-208ENST00000496076 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
CLTC-208ENST00000496076 DNMT3LQ9UJW3 386 aa11.4□□□□□ -0.58
CLTC-208ENST00000496076 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
CLTC-208ENST00000496076 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
CLTC-208ENST00000496076 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
CLTC-208ENST00000496076 PPP1R26Q5T8A7 1209 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms