RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 BRD4O60885 1362 aaPredicted RBP26.74■■□□□ 1.87
ATG3-208ENST00000495756 KNSTRNQ9Y448 316 aa26.74■■□□□ 1.87
ATG3-208ENST00000495756 AHDC1Q5TGY3 1603 aaPredicted RBP26.72■■□□□ 1.87
ATG3-208ENST00000495756 TTC21BQ7Z4L5 1316 aa26.72■■□□□ 1.87
ATG3-208ENST00000495756 TRPM3Q9HCF6 1732 aaPredicted RBP26.71■■□□□ 1.87
ATG3-208ENST00000495756 SOS2Q07890 1332 aaPredicted RBP26.71■■□□□ 1.87
ATG3-208ENST00000495756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.7■■□□□ 1.87
ATG3-208ENST00000495756 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
ATG3-208ENST00000495756 CGNL1Q0VF96 1302 aa26.68■■□□□ 1.86
ATG3-208ENST00000495756 TTC21AQ8NDW8 1320 aa26.68■■□□□ 1.86
ATG3-208ENST00000495756 SBNO1A3KN83 1393 aa26.68■■□□□ 1.86
ATG3-208ENST00000495756 AMER1Q5JTC6 1135 aaPredicted RBP26.67■■□□□ 1.86
ATG3-208ENST00000495756 PHLPP1O60346 1717 aa26.65■■□□□ 1.86
ATG3-208ENST00000495756 FYB1O15117 783 aa26.64■■□□□ 1.86
ATG3-208ENST00000495756 NME9Q86XW9 330 aa26.64■■□□□ 1.86
ATG3-208ENST00000495756 KIF20BQ96Q89 1820 aa26.64■■□□□ 1.85
ATG3-208ENST00000495756 PIK3C2AO00443 1686 aa26.64■■□□□ 1.85
ATG3-208ENST00000495756 TNS3Q68CZ2 1445 aa26.63■■□□□ 1.85
ATG3-208ENST00000495756 ALS2Q96Q42 1657 aa26.63■■□□□ 1.85
ATG3-208ENST00000495756 NPC1L1Q9UHC9 1359 aa26.63■■□□□ 1.85
ATG3-208ENST00000495756 SPATA31A3Q5VYP0 1347 aa26.63■■□□□ 1.85
ATG3-208ENST00000495756 ABTB2Q8N961 1025 aa26.62■■□□□ 1.85
ATG3-208ENST00000495756 COL16A1Q07092 1604 aaPredicted RBP26.62■■□□□ 1.85
ATG3-208ENST00000495756 NSD2O96028 1365 aa26.61■■□□□ 1.85
ATG3-208ENST00000495756 GGNBP2Q9H3C7 697 aa26.6■■□□□ 1.85
ATG3-208ENST00000495756 CC2D1BQ5T0F9 858 aaKnown RBP26.59■■□□□ 1.85
ATG3-208ENST00000495756 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
ATG3-208ENST00000495756 LMOD2Q6P5Q4 547 aa26.59■■□□□ 1.85
ATG3-208ENST00000495756 LRRC59Q96AG4 307 aaKnown RBP26.59■■□□□ 1.85
ATG3-208ENST00000495756 ZRANB1Q9UGI0 708 aa26.59■■□□□ 1.85
ATG3-208ENST00000495756 ARHGEF10O15013 1369 aa26.58■■□□□ 1.85
ATG3-208ENST00000495756 USP31Q70CQ4 1352 aa26.58■■□□□ 1.85
ATG3-208ENST00000495756 CNGB1Q14028 1251 aaPredicted RBP26.57■■□□□ 1.84
ATG3-208ENST00000495756 NUTM2GQ5VZR2 741 aa26.57■■□□□ 1.84
ATG3-208ENST00000495756 ANKRD26Q9UPS8 1709 aa26.57■■□□□ 1.84
ATG3-208ENST00000495756 NLRP6P59044 892 aa26.56■■□□□ 1.84
ATG3-208ENST00000495756 OVOS2A0A0J9YW53 1432 aa26.56■■□□□ 1.84
ATG3-208ENST00000495756 OVOS2Q6IE36 1432 aa26.56■■□□□ 1.84
ATG3-208ENST00000495756 USP54Q70EL1 1684 aa26.56■■□□□ 1.84
ATG3-208ENST00000495756 COG3Q96JB2 828 aa26.55■■□□□ 1.84
ATG3-208ENST00000495756 MARF1Q9Y4F3 1742 aaKnown RBP26.54■■□□□ 1.84
ATG3-208ENST00000495756 NLRP13Q86W25 1043 aa26.54■■□□□ 1.84
ATG3-208ENST00000495756 HSPA1LP34931 641 aa26.53■■□□□ 1.84
ATG3-208ENST00000495756 MORC1Q86VD1 984 aa26.51■■□□□ 1.83
ATG3-208ENST00000495756 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
ATG3-208ENST00000495756 USP19O94966 1318 aa26.49■■□□□ 1.83
ATG3-208ENST00000495756 PNPLA6Q8IY17 1366 aa26.49■■□□□ 1.83
ATG3-208ENST00000495756 PARD3Q8TEW0 1356 aa26.49■■□□□ 1.83
ATG3-208ENST00000495756 PRKRIP1Q9H875 184 aaPredicted RBP26.49■■□□□ 1.83
ATG3-208ENST00000495756 ANP32CO43423 234 aa26.48■■□□□ 1.83
ATG3-208ENST00000495756 SLIT3O75094 1523 aa26.47■■□□□ 1.83
ATG3-208ENST00000495756 COL22A1Q8NFW1 1626 aaPredicted RBP26.47■■□□□ 1.83
ATG3-208ENST00000495756 PLEKHG5O94827 1062 aa26.47■■□□□ 1.83
ATG3-208ENST00000495756 RALBP1Q15311 655 aa26.47■■□□□ 1.83
ATG3-208ENST00000495756 CRYBG1Q9Y4K1 1723 aa26.46■■□□□ 1.83
ATG3-208ENST00000495756 TNNT2P45379 298 aaPredicted RBP26.45■■□□□ 1.82
ATG3-208ENST00000495756 CABLES1Q8TDN4 633 aa26.45■■□□□ 1.82
ATG3-208ENST00000495756 SHPRHQ149N8 1683 aa26.44■■□□□ 1.82
ATG3-208ENST00000495756 JCADQ9P266 1359 aa26.44■■□□□ 1.82
ATG3-208ENST00000495756 PHRF1Q9P1Y6 1649 aaKnown RBP26.44■■□□□ 1.82
ATG3-208ENST00000495756 SOX12O15370 315 aa26.42■■□□□ 1.82
ATG3-208ENST00000495756 GCP02774 474 aa26.42■■□□□ 1.82
ATG3-208ENST00000495756 KCNH5Q8NCM2 988 aa26.42■■□□□ 1.82
ATG3-208ENST00000495756 ABCA3Q99758 1704 aa26.42■■□□□ 1.82
ATG3-208ENST00000495756 NFAT5O94916 1531 aa26.41■■□□□ 1.82
ATG3-208ENST00000495756 FBLN1P23142 703 aa26.41■■□□□ 1.82
ATG3-208ENST00000495756 AATKQ6ZMQ8 1374 aa26.4■■□□□ 1.82
ATG3-208ENST00000495756 PPP2R1AP30153 589 aa26.38■■□□□ 1.81
ATG3-208ENST00000495756 MYBBP1AQ9BQG0 1328 aaKnown RBP26.37■■□□□ 1.81
ATG3-208ENST00000495756 HAP1P54257 671 aaPredicted RBP26.36■■□□□ 1.81
ATG3-208ENST00000495756 MAP2P11137 1827 aaKnown RBP26.36■■□□□ 1.81
ATG3-208ENST00000495756 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
ATG3-208ENST00000495756 POLKQ9UBT6 870 aa26.35■■□□□ 1.81
ATG3-208ENST00000495756 MAP3K19Q56UN5 1328 aa26.33■■□□□ 1.81
ATG3-208ENST00000495756 ZC3H6P61129 1189 aaKnown RBP26.33■■□□□ 1.81
ATG3-208ENST00000495756 ARHGEF25Q86VW2 580 aa26.33■■□□□ 1.81
ATG3-208ENST00000495756 LTN1O94822 1766 aa26.33■■□□□ 1.81
ATG3-208ENST00000495756 SPATA31A6Q5VVP1 1343 aa26.33■■□□□ 1.8
ATG3-208ENST00000495756 CPDO75976 1380 aa26.32■■□□□ 1.8
ATG3-208ENST00000495756 EMILIN1Q9Y6C2 1016 aa26.32■■□□□ 1.8
ATG3-208ENST00000495756 SMG6Q86US8 1419 aaKnown RBP26.32■■□□□ 1.8
ATG3-208ENST00000495756 MTHFSP49914 203 aa26.31■■□□□ 1.8
ATG3-208ENST00000495756 MIER1Q8N108 512 aa26.31■■□□□ 1.8
ATG3-208ENST00000495756 KIAA0232Q92628 1395 aa26.31■■□□□ 1.8
ATG3-208ENST00000495756 NUTM2BA6NNL0 878 aaPredicted RBP26.3■■□□□ 1.8
ATG3-208ENST00000495756 NUTM2EB1AL46 878 aaPredicted RBP26.3■■□□□ 1.8
ATG3-208ENST00000495756 NUTM2AQ8IVF1 878 aaPredicted RBP26.3■■□□□ 1.8
ATG3-208ENST00000495756 PPM1GO15355 546 aaPredicted RBP26.29■■□□□ 1.8
ATG3-208ENST00000495756 PEAK1Q9H792 1746 aa26.28■■□□□ 1.8
ATG3-208ENST00000495756 ZBTB7CA1YPR0 619 aa26.28■■□□□ 1.8
ATG3-208ENST00000495756 KIF24Q5T7B8 1368 aa26.27■■□□□ 1.8
ATG3-208ENST00000495756 AMPHP49418 695 aa26.27■■□□□ 1.8
ATG3-208ENST00000495756 PRDM11Q9NQV5 511 aa26.27■■□□□ 1.8
ATG3-208ENST00000495756 RTL1A6NKG5 1358 aa26.26■■□□□ 1.79
ATG3-208ENST00000495756 CDK12Q9NYV4 1490 aaPredicted RBP26.26■■□□□ 1.79
ATG3-208ENST00000495756 ADAMTS2O95450 1211 aa26.25■■□□□ 1.79
ATG3-208ENST00000495756 FLT4P35916 1363 aa26.25■■□□□ 1.79
ATG3-208ENST00000495756 LRP6O75581 1613 aa26.24■■□□□ 1.79
ATG3-208ENST00000495756 HOXC9P31274 260 aa26.23■■□□□ 1.79
ATG3-208ENST00000495756 CHRNA2Q15822 529 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms