RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 HSPA5P11021 654 aaKnown RBP22.71■■□□□ 1.23
YIF1A-209ENST00000494836 CDCA8Q53HL2 280 aa22.71■■□□□ 1.23
YIF1A-209ENST00000494836 NINLQ9Y2I6 1382 aa22.71■■□□□ 1.23
YIF1A-209ENST00000494836 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
YIF1A-209ENST00000494836 PLEKHG5O94827 1062 aa22.7■■□□□ 1.22
YIF1A-209ENST00000494836 HAP1P54257 671 aaPredicted RBP22.7■■□□□ 1.22
YIF1A-209ENST00000494836 ZNF692Q9BU19 519 aaPredicted RBP22.7■■□□□ 1.22
YIF1A-209ENST00000494836 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
YIF1A-209ENST00000494836 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
YIF1A-209ENST00000494836 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
YIF1A-209ENST00000494836 C8orf37Q96NL8 207 aa22.68■■□□□ 1.22
YIF1A-209ENST00000494836 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
YIF1A-209ENST00000494836 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
YIF1A-209ENST00000494836 CD163L1Q9NR16 1453 aa22.67■■□□□ 1.22
YIF1A-209ENST00000494836 NRKQ7Z2Y5 1582 aa22.67■■□□□ 1.22
YIF1A-209ENST00000494836 SSH2Q76I76 1423 aa22.66■■□□□ 1.22
YIF1A-209ENST00000494836 CRYBG1Q9Y4K1 1723 aa22.66■■□□□ 1.22
YIF1A-209ENST00000494836 HDGFL2Q7Z4V5 671 aaPredicted RBP22.66■■□□□ 1.22
YIF1A-209ENST00000494836 ABTB2Q8N961 1025 aa22.66■■□□□ 1.22
YIF1A-209ENST00000494836 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
YIF1A-209ENST00000494836 RGS17Q9UGC6 210 aaPredicted RBP22.66■■□□□ 1.22
YIF1A-209ENST00000494836 NUTM2GQ5VZR2 741 aa22.64■■□□□ 1.21
YIF1A-209ENST00000494836 NGLY1Q96IV0 654 aa22.64■■□□□ 1.21
YIF1A-209ENST00000494836 A0A1W2PP64 1363 aa22.63■■□□□ 1.21
YIF1A-209ENST00000494836 AFF2P51816 1311 aa22.63■■□□□ 1.21
YIF1A-209ENST00000494836 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
YIF1A-209ENST00000494836 TTC21BQ7Z4L5 1316 aa22.62■■□□□ 1.21
YIF1A-209ENST00000494836 PIK3C2AO00443 1686 aa22.62■■□□□ 1.21
YIF1A-209ENST00000494836 ZNF772Q68DY9 489 aaPredicted RBP22.62■■□□□ 1.21
YIF1A-209ENST00000494836 TTC21AQ8NDW8 1320 aa22.61■■□□□ 1.21
YIF1A-209ENST00000494836 EDC4Q6P2E9 1401 aaKnown RBP22.6■■□□□ 1.21
YIF1A-209ENST00000494836 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
YIF1A-209ENST00000494836 MYOM1P52179 1685 aa22.6■■□□□ 1.21
YIF1A-209ENST00000494836 ANKRD36BQ8N2N9 1353 aa22.6■■□□□ 1.21
YIF1A-209ENST00000494836 USP19O94966 1318 aa22.58■■□□□ 1.21
YIF1A-209ENST00000494836 NLRP6P59044 892 aa22.58■■□□□ 1.21
YIF1A-209ENST00000494836 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
YIF1A-209ENST00000494836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.57■■□□□ 1.2
YIF1A-209ENST00000494836 POLR3GLQ9BT43 218 aa22.57■■□□□ 1.2
YIF1A-209ENST00000494836 POTEAQ6S8J7 498 aa22.56■■□□□ 1.2
YIF1A-209ENST00000494836 USP21Q9UK80 565 aa22.56■■□□□ 1.2
YIF1A-209ENST00000494836 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
YIF1A-209ENST00000494836 SLIT2O94813 1529 aa22.55■■□□□ 1.2
YIF1A-209ENST00000494836 SLIT3O75094 1523 aa22.54■■□□□ 1.2
YIF1A-209ENST00000494836 COL14A1Q05707 1796 aaKnown RBP22.53■■□□□ 1.2
YIF1A-209ENST00000494836 ILDR2Q71H61 639 aa22.53■■□□□ 1.2
YIF1A-209ENST00000494836 PRDM11Q9NQV5 511 aa22.53■■□□□ 1.2
YIF1A-209ENST00000494836 NWD2Q9ULI1 1742 aa22.53■■□□□ 1.2
YIF1A-209ENST00000494836 BCL9LQ86UU0 1499 aa22.53■■□□□ 1.2
YIF1A-209ENST00000494836 KIAA0232Q92628 1395 aa22.52■■□□□ 1.2
YIF1A-209ENST00000494836 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.52■■□□□ 1.2
YIF1A-209ENST00000494836 GCP02774 474 aa22.52■■□□□ 1.2
YIF1A-209ENST00000494836 NME9Q86XW9 330 aa22.52■■□□□ 1.2
YIF1A-209ENST00000494836 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
YIF1A-209ENST00000494836 FAM83GA6ND36 823 aa22.51■■□□□ 1.19
YIF1A-209ENST00000494836 ZC3H6P61129 1189 aaKnown RBP22.51■■□□□ 1.19
YIF1A-209ENST00000494836 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
YIF1A-209ENST00000494836 C11orf95C9JLR9 678 aaPredicted RBP22.5■■□□□ 1.19
YIF1A-209ENST00000494836 QTRT2Q9H974 415 aaKnown RBP22.5■■□□□ 1.19
YIF1A-209ENST00000494836 CPDO75976 1380 aa22.5■■□□□ 1.19
YIF1A-209ENST00000494836 TRPC5Q9UL62 973 aaPredicted RBP22.49■■□□□ 1.19
YIF1A-209ENST00000494836 UNC5CLQ8IV45 518 aa22.48■■□□□ 1.19
YIF1A-209ENST00000494836 ZRANB1Q9UGI0 708 aa22.48■■□□□ 1.19
YIF1A-209ENST00000494836 ATRNO75882 1429 aa22.48■■□□□ 1.19
YIF1A-209ENST00000494836 KCNH5Q8NCM2 988 aa22.47■■□□□ 1.19
YIF1A-209ENST00000494836 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
YIF1A-209ENST00000494836 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
YIF1A-209ENST00000494836 NRAPQ86VF7 1730 aa22.46■■□□□ 1.19
YIF1A-209ENST00000494836 RXRBP28702 533 aa22.46■■□□□ 1.19
YIF1A-209ENST00000494836 CHRNA2Q15822 529 aa22.46■■□□□ 1.19
YIF1A-209ENST00000494836 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
YIF1A-209ENST00000494836 KIF7Q2M1P5 1343 aa22.46■■□□□ 1.19
YIF1A-209ENST00000494836 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
YIF1A-209ENST00000494836 SOX12O15370 315 aa22.45■■□□□ 1.18
YIF1A-209ENST00000494836 NFAT5O94916 1531 aa22.45■■□□□ 1.18
YIF1A-209ENST00000494836 RBM6P78332 1123 aaKnown RBP22.44■■□□□ 1.18
YIF1A-209ENST00000494836 KIF20BQ96Q89 1820 aa22.43■■□□□ 1.18
YIF1A-209ENST00000494836 CARD14Q9BXL6 1004 aa22.43■■□□□ 1.18
YIF1A-209ENST00000494836 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
YIF1A-209ENST00000494836 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
YIF1A-209ENST00000494836 COG3Q96JB2 828 aa22.42■■□□□ 1.18
YIF1A-209ENST00000494836 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
YIF1A-209ENST00000494836 VPS72Q15906 364 aa22.41■■□□□ 1.18
YIF1A-209ENST00000494836 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
YIF1A-209ENST00000494836 FYB1O15117 783 aa22.4■■□□□ 1.18
YIF1A-209ENST00000494836 CAMTA1Q9Y6Y1 1673 aa22.39■■□□□ 1.18
YIF1A-209ENST00000494836 AATKQ6ZMQ8 1374 aa22.39■■□□□ 1.18
YIF1A-209ENST00000494836 CCDC7Q96M83 1385 aa22.39■■□□□ 1.18
YIF1A-209ENST00000494836 ARHGEF25Q86VW2 580 aa22.39■■□□□ 1.17
YIF1A-209ENST00000494836 GJD4Q96KN9 370 aaPredicted RBP22.39■■□□□ 1.17
YIF1A-209ENST00000494836 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
YIF1A-209ENST00000494836 PANK3Q9H999 370 aa22.39■■□□□ 1.17
YIF1A-209ENST00000494836 CCDC9Q9Y3X0 531 aaKnown RBP22.39■■□□□ 1.17
YIF1A-209ENST00000494836 CGNL1Q0VF96 1302 aa22.38■■□□□ 1.17
YIF1A-209ENST00000494836 GLI3P10071 1580 aa22.38■■□□□ 1.17
YIF1A-209ENST00000494836 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
YIF1A-209ENST00000494836 STRN4Q9NRL3 753 aa22.37■■□□□ 1.17
YIF1A-209ENST00000494836 ABCC6O95255 1503 aa22.36■■□□□ 1.17
YIF1A-209ENST00000494836 LTN1O94822 1766 aa22.36■■□□□ 1.17
YIF1A-209ENST00000494836 COL18A1P39060 1754 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms