RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
LIMS2-216ENST00000494613 TRPM3Q9HCF6 1732 aaPredicted RBP22.24■■□□□ 1.15
LIMS2-216ENST00000494613 VPS72Q15906 364 aa22.24■■□□□ 1.15
LIMS2-216ENST00000494613 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
LIMS2-216ENST00000494613 CARD11Q9BXL7 1154 aa22.23■■□□□ 1.15
LIMS2-216ENST00000494613 BTG4Q9NY30 223 aa22.23■■□□□ 1.15
LIMS2-216ENST00000494613 TRPM1Q7Z4N2 1603 aa22.23■■□□□ 1.15
LIMS2-216ENST00000494613 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
LIMS2-216ENST00000494613 PPIP5K1Q6PFW1 1433 aa22.21■■□□□ 1.15
LIMS2-216ENST00000494613 ALS2Q96Q42 1657 aa22.2■■□□□ 1.14
LIMS2-216ENST00000494613 ONECUT3O60422 494 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-216ENST00000494613 ZC3H6P61129 1189 aaKnown RBP22.19■■□□□ 1.14
LIMS2-216ENST00000494613 ITSN1Q15811 1721 aa22.18■■□□□ 1.14
LIMS2-216ENST00000494613 PRDM11Q9NQV5 511 aa22.18■■□□□ 1.14
LIMS2-216ENST00000494613 RALGAPBQ86X10 1494 aa22.17■■□□□ 1.14
LIMS2-216ENST00000494613 NLRP13Q86W25 1043 aa22.17■■□□□ 1.14
LIMS2-216ENST00000494613 SEPT12Q8IYM1 358 aa22.17■■□□□ 1.14
LIMS2-216ENST00000494613 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
LIMS2-216ENST00000494613 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-216ENST00000494613 QRICH2Q9H0J4 1663 aa22.15■■□□□ 1.14
LIMS2-216ENST00000494613 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.14
LIMS2-216ENST00000494613 KIAA0232Q92628 1395 aa22.13■■□□□ 1.13
LIMS2-216ENST00000494613 GCP02774 474 aa22.13■■□□□ 1.13
LIMS2-216ENST00000494613 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
LIMS2-216ENST00000494613 TOPAZ1Q8N9V7 1692 aa22.13■■□□□ 1.13
LIMS2-216ENST00000494613 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.12■■□□□ 1.13
LIMS2-216ENST00000494613 NLRP6P59044 892 aa22.12■■□□□ 1.13
LIMS2-216ENST00000494613 GLI3P10071 1580 aa22.12■■□□□ 1.13
LIMS2-216ENST00000494613 BRD4O60885 1362 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-216ENST00000494613 ABCA3Q99758 1704 aa22.11■■□□□ 1.13
LIMS2-216ENST00000494613 FAM98CQ17RN3 349 aaKnown RBP22.1■■□□□ 1.13
LIMS2-216ENST00000494613 EVA1CP58658 441 aa22.09■■□□□ 1.13
LIMS2-216ENST00000494613 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
LIMS2-216ENST00000494613 NWD2Q9ULI1 1742 aa22.09■■□□□ 1.13
LIMS2-216ENST00000494613 USP19O94966 1318 aa22.08■■□□□ 1.13
LIMS2-216ENST00000494613 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
LIMS2-216ENST00000494613 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
LIMS2-216ENST00000494613 USP6P35125 1406 aa22.08■■□□□ 1.13
LIMS2-216ENST00000494613 STRN4Q9NRL3 753 aa22.08■■□□□ 1.13
LIMS2-216ENST00000494613 PLCH1Q4KWH8 1693 aa22.07■■□□□ 1.12
LIMS2-216ENST00000494613 COL14A1Q05707 1796 aaKnown RBP22.07■■□□□ 1.12
LIMS2-216ENST00000494613 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
LIMS2-216ENST00000494613 SSH2Q76I76 1423 aa22.06■■□□□ 1.12
LIMS2-216ENST00000494613 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
LIMS2-216ENST00000494613 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
LIMS2-216ENST00000494613 SBNO2Q9Y2G9 1366 aa22.06■■□□□ 1.12
LIMS2-216ENST00000494613 A0A0G2JS52 829 aa22.05■■□□□ 1.12
LIMS2-216ENST00000494613 MYT1Q01538 1121 aa22.05■■□□□ 1.12
LIMS2-216ENST00000494613 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
LIMS2-216ENST00000494613 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
LIMS2-216ENST00000494613 CRYBG1Q9Y4K1 1723 aa22.05■■□□□ 1.12
LIMS2-216ENST00000494613 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
LIMS2-216ENST00000494613 CPDO75976 1380 aa22.03■■□□□ 1.12
LIMS2-216ENST00000494613 TESK2Q96S53 571 aa22.03■■□□□ 1.12
LIMS2-216ENST00000494613 SPATA31A1Q5TZJ5 1347 aa22.03■■□□□ 1.12
LIMS2-216ENST00000494613 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
LIMS2-216ENST00000494613 CPSF1Q10570 1443 aaKnown RBP22.02■■□□□ 1.12
LIMS2-216ENST00000494613 KTN1Q86UP2 1357 aaKnown RBP22.01■■□□□ 1.11
LIMS2-216ENST00000494613 ZBTB7CA1YPR0 619 aa22.01■■□□□ 1.11
LIMS2-216ENST00000494613 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
LIMS2-216ENST00000494613 USP35Q9P2H5 1018 aa22.01■■□□□ 1.11
LIMS2-216ENST00000494613 SLC24A1O60721 1099 aa22■■□□□ 1.11
LIMS2-216ENST00000494613 TTC21AQ8NDW8 1320 aa22■■□□□ 1.11
LIMS2-216ENST00000494613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.99■■□□□ 1.11
LIMS2-216ENST00000494613 NRAPQ86VF7 1730 aa21.99■■□□□ 1.11
LIMS2-216ENST00000494613 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
LIMS2-216ENST00000494613 HDGFL2Q7Z4V5 671 aaPredicted RBP21.98■■□□□ 1.11
LIMS2-216ENST00000494613 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
LIMS2-216ENST00000494613 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
LIMS2-216ENST00000494613 BRWD3Q6RI45 1802 aa21.97■■□□□ 1.11
LIMS2-216ENST00000494613 FAM182BQ5T319 152 aa21.97■■□□□ 1.11
LIMS2-216ENST00000494613 KCNH5Q8NCM2 988 aa21.97■■□□□ 1.11
LIMS2-216ENST00000494613 ZRANB1Q9UGI0 708 aa21.97■■□□□ 1.11
LIMS2-216ENST00000494613 ARHGEF25Q86VW2 580 aa21.96■■□□□ 1.11
LIMS2-216ENST00000494613 TERF2IPQ9NYB0 399 aa21.96■■□□□ 1.11
LIMS2-216ENST00000494613 AXIN2Q9Y2T1 843 aa21.96■■□□□ 1.11
LIMS2-216ENST00000494613 SOX12O15370 315 aa21.95■■□□□ 1.1
LIMS2-216ENST00000494613 BARGINQ6ZT62 677 aa21.95■■□□□ 1.1
LIMS2-216ENST00000494613 EP400Q96L91 3159 aa21.95■■□□□ 1.1
LIMS2-216ENST00000494613 SF3B2Q13435 895 aaKnown RBP21.94■■□□□ 1.1
LIMS2-216ENST00000494613 TCP11L2Q8N4U5 519 aa21.94■■□□□ 1.1
LIMS2-216ENST00000494613 AATKQ6ZMQ8 1374 aa21.94■■□□□ 1.1
LIMS2-216ENST00000494613 BLMP54132 1417 aaPredicted RBP21.93■■□□□ 1.1
LIMS2-216ENST00000494613 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
LIMS2-216ENST00000494613 DEFB132Q7Z7B7 95 aa21.93■■□□□ 1.1
LIMS2-216ENST00000494613 NME9Q86XW9 330 aa21.93■■□□□ 1.1
LIMS2-216ENST00000494613 THRAP3Q9Y2W1 955 aaKnown RBP21.92■■□□□ 1.1
LIMS2-216ENST00000494613 CD163L1Q9NR16 1453 aa21.91■■□□□ 1.1
LIMS2-216ENST00000494613 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
LIMS2-216ENST00000494613 SLIT3O75094 1523 aa21.9■■□□□ 1.1
LIMS2-216ENST00000494613 AKAP12Q02952 1782 aa21.89■■□□□ 1.1
LIMS2-216ENST00000494613 PIK3C2AO00443 1686 aa21.89■■□□□ 1.1
LIMS2-216ENST00000494613 TMF1P82094 1093 aa21.89■■□□□ 1.09
LIMS2-216ENST00000494613 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
LIMS2-216ENST00000494613 USP31Q70CQ4 1352 aa21.88■■□□□ 1.09
LIMS2-216ENST00000494613 USP47Q96K76 1375 aa21.88■■□□□ 1.09
LIMS2-216ENST00000494613 TOM1L2Q6ZVM7 507 aa21.88■■□□□ 1.09
LIMS2-216ENST00000494613 FAM196AQ6ZSG2 479 aa21.87■■□□□ 1.09
LIMS2-216ENST00000494613 COL5A2P05997 1499 aaPredicted RBP21.87■■□□□ 1.09
LIMS2-216ENST00000494613 LMO7Q8WWI1 1683 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms