RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 PHF8Q9UPP1 1060 aa27.8■■■□□ 2.04
KPNA1-210ENST00000494339 ATF3P18847 181 aa27.79■■■□□ 2.04
KPNA1-210ENST00000494339 NME9Q86XW9 330 aa27.79■■■□□ 2.04
KPNA1-210ENST00000494339 MSH6P52701 1360 aa27.77■■■□□ 2.04
KPNA1-210ENST00000494339 PNISRQ8TF01 805 aaKnown RBP27.77■■■□□ 2.04
KPNA1-210ENST00000494339 DCCP43146 1447 aa27.77■■■□□ 2.04
KPNA1-210ENST00000494339 TTC21BQ7Z4L5 1316 aa27.77■■■□□ 2.04
KPNA1-210ENST00000494339 ORAI2Q96SN7 254 aa27.76■■■□□ 2.03
KPNA1-210ENST00000494339 ZRANB1Q9UGI0 708 aa27.75■■■□□ 2.03
KPNA1-210ENST00000494339 C1orf167Q5SNV9 1468 aa27.74■■■□□ 2.03
KPNA1-210ENST00000494339 SSH2Q76I76 1423 aa27.74■■■□□ 2.03
KPNA1-210ENST00000494339 CADPS2Q86UW7 1296 aa27.73■■■□□ 2.03
KPNA1-210ENST00000494339 MST1RQ04912 1400 aa27.72■■■□□ 2.03
KPNA1-210ENST00000494339 COG3Q96JB2 828 aa27.7■■■□□ 2.02
KPNA1-210ENST00000494339 TTC21AQ8NDW8 1320 aa27.69■■■□□ 2.02
KPNA1-210ENST00000494339 MTHFSP49914 203 aa27.68■■■□□ 2.02
KPNA1-210ENST00000494339 FOXO3O43524 673 aa27.67■■■□□ 2.02
KPNA1-210ENST00000494339 PSME1Q06323 249 aa27.67■■■□□ 2.02
KPNA1-210ENST00000494339 PAK3O75914 559 aaPredicted RBP27.65■■■□□ 2.02
KPNA1-210ENST00000494339 FBLN1P23142 703 aa27.65■■■□□ 2.02
KPNA1-210ENST00000494339 KIF1AQ12756 1690 aa27.65■■■□□ 2.02
KPNA1-210ENST00000494339 HNRNPUQ00839 825 aaKnown RBP eCLIP27.64■■■□□ 2.02
KPNA1-210ENST00000494339 LTBP4Q8N2S1 1624 aa27.64■■■□□ 2.01
KPNA1-210ENST00000494339 PIK3C2AO00443 1686 aa27.63■■■□□ 2.01
KPNA1-210ENST00000494339 OVOS2A0A0J9YW53 1432 aa27.63■■■□□ 2.01
KPNA1-210ENST00000494339 OVOS2Q6IE36 1432 aa27.63■■■□□ 2.01
KPNA1-210ENST00000494339 XPCQ01831 940 aaPredicted RBP27.63■■■□□ 2.01
KPNA1-210ENST00000494339 MAP2P11137 1827 aaKnown RBP27.62■■■□□ 2.01
KPNA1-210ENST00000494339 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
KPNA1-210ENST00000494339 WDR43Q15061 677 aaKnown RBP eCLIP27.59■■■□□ 2.01
KPNA1-210ENST00000494339 ABTB2Q8N961 1025 aa27.59■■■□□ 2.01
KPNA1-210ENST00000494339 NUTM2GQ5VZR2 741 aa27.59■■■□□ 2.01
KPNA1-210ENST00000494339 CFAP53Q96M91 514 aa27.59■■■□□ 2.01
KPNA1-210ENST00000494339 NLRP6P59044 892 aa27.57■■■□□ 2
KPNA1-210ENST00000494339 POLKQ9UBT6 870 aa27.57■■■□□ 2
KPNA1-210ENST00000494339 ADAMTS8Q9UP79 889 aa27.57■■■□□ 2
KPNA1-210ENST00000494339 USP31Q70CQ4 1352 aa27.56■■■□□ 2
KPNA1-210ENST00000494339 PPM1GO15355 546 aaPredicted RBP27.56■■■□□ 2
KPNA1-210ENST00000494339 SLAIN2Q9P270 581 aa27.56■■■□□ 2
KPNA1-210ENST00000494339 AATKQ6ZMQ8 1374 aa27.56■■■□□ 2
KPNA1-210ENST00000494339 SOX12O15370 315 aa27.55■■■□□ 2
KPNA1-210ENST00000494339 KRT28Q7Z3Y7 464 aa27.55■■■□□ 2
KPNA1-210ENST00000494339 DDX17Q92841 729 aaKnown RBP27.55■■■□□ 2
KPNA1-210ENST00000494339 RRS1Q15050 365 aaKnown RBP27.55■■■□□ 2
KPNA1-210ENST00000494339 EMILIN1Q9Y6C2 1016 aa27.55■■■□□ 2
KPNA1-210ENST00000494339 SHPRHQ149N8 1683 aa27.54■■■□□ 2
KPNA1-210ENST00000494339 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
KPNA1-210ENST00000494339 TRPM3Q9HCF6 1732 aaPredicted RBP27.53■■■□□ 2
KPNA1-210ENST00000494339 SENP3-EIF4A1A0A087X0R7 540 aa27.53■■■□□ 2
KPNA1-210ENST00000494339 BRINP3Q76B58 766 aa27.52■■■□□ 2
KPNA1-210ENST00000494339 USP54Q70EL1 1684 aa27.51■■□□□ 1.99
KPNA1-210ENST00000494339 COL3A1P02461 1466 aaPredicted RBP27.5■■□□□ 1.99
KPNA1-210ENST00000494339 NPHP3Q7Z494 1330 aa27.5■■□□□ 1.99
KPNA1-210ENST00000494339 SMG6Q86US8 1419 aaKnown RBP27.49■■□□□ 1.99
KPNA1-210ENST00000494339 LMOD2Q6P5Q4 547 aa27.49■■□□□ 1.99
KPNA1-210ENST00000494339 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
KPNA1-210ENST00000494339 BLMP54132 1417 aaPredicted RBP27.48■■□□□ 1.99
KPNA1-210ENST00000494339 INSRP06213 1382 aa27.46■■□□□ 1.99
KPNA1-210ENST00000494339 CDK12Q9NYV4 1490 aaPredicted RBP27.46■■□□□ 1.99
KPNA1-210ENST00000494339 DIAPH1O60610 1272 aaKnown RBP27.44■■□□□ 1.98
KPNA1-210ENST00000494339 PLEKHG5O94827 1062 aa27.43■■□□□ 1.98
KPNA1-210ENST00000494339 PXDNQ92626 1479 aa27.43■■□□□ 1.98
KPNA1-210ENST00000494339 ALS2Q96Q42 1657 aa27.43■■□□□ 1.98
KPNA1-210ENST00000494339 ZBED9Q6R2W3 1325 aa27.42■■□□□ 1.98
KPNA1-210ENST00000494339 CCDC146Q8IYE0 955 aa27.42■■□□□ 1.98
KPNA1-210ENST00000494339 NUDCQ9Y266 331 aa27.42■■□□□ 1.98
KPNA1-210ENST00000494339 MAP3K19Q56UN5 1328 aa27.42■■□□□ 1.98
KPNA1-210ENST00000494339 PEAK1Q9H792 1746 aa27.42■■□□□ 1.98
KPNA1-210ENST00000494339 U2SURPO15042 1029 aaKnown RBP27.41■■□□□ 1.98
KPNA1-210ENST00000494339 U2AF1L5P0DN76 240 aaPredicted RBP27.41■■□□□ 1.98
KPNA1-210ENST00000494339 U2AF1Q01081 240 aaKnown RBP eCLIP27.41■■□□□ 1.98
KPNA1-210ENST00000494339 SBNO1A3KN83 1393 aa27.4■■□□□ 1.98
KPNA1-210ENST00000494339 SALL2Q9Y467 1007 aaPredicted RBP27.39■■□□□ 1.97
KPNA1-210ENST00000494339 TNS3Q68CZ2 1445 aa27.37■■□□□ 1.97
KPNA1-210ENST00000494339 AMPHP49418 695 aa27.36■■□□□ 1.97
KPNA1-210ENST00000494339 NFAT5O94916 1531 aa27.36■■□□□ 1.97
KPNA1-210ENST00000494339 HSP90AB2PQ58FF8 381 aa27.35■■□□□ 1.97
KPNA1-210ENST00000494339 KCNH5Q8NCM2 988 aa27.35■■□□□ 1.97
KPNA1-210ENST00000494339 SPATA31A3Q5VYP0 1347 aa27.35■■□□□ 1.97
KPNA1-210ENST00000494339 IL13P35225 146 aa27.35■■□□□ 1.97
KPNA1-210ENST00000494339 LTN1O94822 1766 aa27.35■■□□□ 1.97
KPNA1-210ENST00000494339 FLT4P35916 1363 aa27.34■■□□□ 1.97
KPNA1-210ENST00000494339 USP19O94966 1318 aa27.34■■□□□ 1.97
KPNA1-210ENST00000494339 SOS2Q07890 1332 aaPredicted RBP27.34■■□□□ 1.97
KPNA1-210ENST00000494339 SLIT3O75094 1523 aa27.34■■□□□ 1.97
KPNA1-210ENST00000494339 GCP02774 474 aa27.33■■□□□ 1.97
KPNA1-210ENST00000494339 NHSL1Q5SYE7 1610 aa27.33■■□□□ 1.97
KPNA1-210ENST00000494339 ROBO1Q9Y6N7 1651 aa27.32■■□□□ 1.96
KPNA1-210ENST00000494339 APAF1O14727 1248 aa27.31■■□□□ 1.96
KPNA1-210ENST00000494339 EIF4A2Q14240 407 aaKnown RBP27.31■■□□□ 1.96
KPNA1-210ENST00000494339 CERKQ8TCT0 537 aa27.31■■□□□ 1.96
KPNA1-210ENST00000494339 MED1Q15648 1581 aaPredicted RBP27.31■■□□□ 1.96
KPNA1-210ENST00000494339 ZBTB7CA1YPR0 619 aa27.29■■□□□ 1.96
KPNA1-210ENST00000494339 RUNDC1Q96C34 613 aa27.29■■□□□ 1.96
KPNA1-210ENST00000494339 ARHGEF10O15013 1369 aa27.29■■□□□ 1.96
KPNA1-210ENST00000494339 HOXC9P31274 260 aa27.29■■□□□ 1.96
KPNA1-210ENST00000494339 KIF24Q5T7B8 1368 aa27.28■■□□□ 1.96
KPNA1-210ENST00000494339 CABLES1Q8TDN4 633 aa27.28■■□□□ 1.96
KPNA1-210ENST00000494339 GTF3C3Q9Y5Q9 886 aa27.28■■□□□ 1.96
KPNA1-210ENST00000494339 HMOX1P09601 288 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms