RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 NWD2Q9ULI1 1742 aa18.13■□□□□ 0.49
HSPG2-212ENST00000493940 PLEKHG3A1L390 1219 aa18.13■□□□□ 0.49
HSPG2-212ENST00000493940 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
HSPG2-212ENST00000493940 ARHGEF10O15013 1369 aa18.13■□□□□ 0.49
HSPG2-212ENST00000493940 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
HSPG2-212ENST00000493940 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
HSPG2-212ENST00000493940 CCDC61Q9Y6R9 512 aa18.12■□□□□ 0.49
HSPG2-212ENST00000493940 ROCK2O75116 1388 aaKnown RBP18.12■□□□□ 0.49
HSPG2-212ENST00000493940 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
HSPG2-212ENST00000493940 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
HSPG2-212ENST00000493940 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
HSPG2-212ENST00000493940 UNC5CLQ8IV45 518 aa18.1■□□□□ 0.49
HSPG2-212ENST00000493940 PPIP5K1Q6PFW1 1433 aa18.09■□□□□ 0.49
HSPG2-212ENST00000493940 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
HSPG2-212ENST00000493940 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
HSPG2-212ENST00000493940 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-212ENST00000493940 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-212ENST00000493940 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
HSPG2-212ENST00000493940 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
HSPG2-212ENST00000493940 COL14A1Q05707 1796 aaKnown RBP18.07■□□□□ 0.48
HSPG2-212ENST00000493940 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
HSPG2-212ENST00000493940 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
HSPG2-212ENST00000493940 CARD11Q9BXL7 1154 aa18.03■□□□□ 0.48
HSPG2-212ENST00000493940 BTG4Q9NY30 223 aa18.03■□□□□ 0.48
HSPG2-212ENST00000493940 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
HSPG2-212ENST00000493940 CHRNA2Q15822 529 aa18.02■□□□□ 0.48
HSPG2-212ENST00000493940 VPS72Q15906 364 aa18.02■□□□□ 0.48
HSPG2-212ENST00000493940 SSH2Q76I76 1423 aa18.02■□□□□ 0.48
HSPG2-212ENST00000493940 NRKQ7Z2Y5 1582 aa18.02■□□□□ 0.48
HSPG2-212ENST00000493940 CCDC125Q86Z20 511 aa18.02■□□□□ 0.48
HSPG2-212ENST00000493940 PIK3C2AO00443 1686 aa18.02■□□□□ 0.47
HSPG2-212ENST00000493940 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
HSPG2-212ENST00000493940 KIAA0232Q92628 1395 aa18.01■□□□□ 0.47
HSPG2-212ENST00000493940 ABTB2Q8N961 1025 aa18■□□□□ 0.47
HSPG2-212ENST00000493940 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
HSPG2-212ENST00000493940 RGPD5Q99666 1765 aa17.99■□□□□ 0.47
HSPG2-212ENST00000493940 USP6P35125 1406 aa17.99■□□□□ 0.47
HSPG2-212ENST00000493940 ONECUT3O60422 494 aaPredicted RBP17.98■□□□□ 0.47
HSPG2-212ENST00000493940 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
HSPG2-212ENST00000493940 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
HSPG2-212ENST00000493940 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
HSPG2-212ENST00000493940 USP19O94966 1318 aa17.98■□□□□ 0.47
HSPG2-212ENST00000493940 CAMTA1Q9Y6Y1 1673 aa17.97■□□□□ 0.47
HSPG2-212ENST00000493940 COL18A1P39060 1754 aa17.96■□□□□ 0.47
HSPG2-212ENST00000493940 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
HSPG2-212ENST00000493940 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
HSPG2-212ENST00000493940 CCDC9Q9Y3X0 531 aaKnown RBP17.96■□□□□ 0.47
HSPG2-212ENST00000493940 CPSF1Q10570 1443 aaKnown RBP17.96■□□□□ 0.47
HSPG2-212ENST00000493940 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
HSPG2-212ENST00000493940 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
HSPG2-212ENST00000493940 GCP02774 474 aa17.94■□□□□ 0.46
HSPG2-212ENST00000493940 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
HSPG2-212ENST00000493940 TESK2Q96S53 571 aa17.94■□□□□ 0.46
HSPG2-212ENST00000493940 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
HSPG2-212ENST00000493940 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
HSPG2-212ENST00000493940 SLIT3O75094 1523 aa17.93■□□□□ 0.46
HSPG2-212ENST00000493940 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
HSPG2-212ENST00000493940 ST20-MTHFSA0A0A6YYL1 179 aa17.92■□□□□ 0.46
HSPG2-212ENST00000493940 NLRP6P59044 892 aa17.92■□□□□ 0.46
HSPG2-212ENST00000493940 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
HSPG2-212ENST00000493940 THSD7AQ9UPZ6 1657 aa17.92■□□□□ 0.46
HSPG2-212ENST00000493940 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
HSPG2-212ENST00000493940 BRD4O60885 1362 aaPredicted RBP17.91■□□□□ 0.46
HSPG2-212ENST00000493940 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
HSPG2-212ENST00000493940 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
HSPG2-212ENST00000493940 CPDO75976 1380 aa17.9■□□□□ 0.46
HSPG2-212ENST00000493940 ZNF692Q9BU19 519 aaPredicted RBP17.89■□□□□ 0.45
HSPG2-212ENST00000493940 SPATA31A1Q5TZJ5 1347 aa17.89■□□□□ 0.45
HSPG2-212ENST00000493940 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
HSPG2-212ENST00000493940 LARP1Q6PKG0 1096 aaKnown RBP17.88■□□□□ 0.45
HSPG2-212ENST00000493940 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-212ENST00000493940 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
HSPG2-212ENST00000493940 AXIN2Q9Y2T1 843 aa17.87■□□□□ 0.45
HSPG2-212ENST00000493940 USP54Q70EL1 1684 aa17.87■□□□□ 0.45
HSPG2-212ENST00000493940 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
HSPG2-212ENST00000493940 LTN1O94822 1766 aa17.85■□□□□ 0.45
HSPG2-212ENST00000493940 NFAT5O94916 1531 aa17.85■□□□□ 0.45
HSPG2-212ENST00000493940 COL5A2P05997 1499 aaPredicted RBP17.85■□□□□ 0.45
HSPG2-212ENST00000493940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
HSPG2-212ENST00000493940 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
HSPG2-212ENST00000493940 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
HSPG2-212ENST00000493940 NME9Q86XW9 330 aa17.84■□□□□ 0.45
HSPG2-212ENST00000493940 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.44
HSPG2-212ENST00000493940 A0A0G2JS52 829 aa17.83■□□□□ 0.44
HSPG2-212ENST00000493940 SOX12O15370 315 aa17.83■□□□□ 0.44
HSPG2-212ENST00000493940 EVA1CP58658 441 aa17.83■□□□□ 0.44
HSPG2-212ENST00000493940 MYT1Q01538 1121 aa17.83■□□□□ 0.44
HSPG2-212ENST00000493940 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
HSPG2-212ENST00000493940 USP47Q96K76 1375 aa17.82■□□□□ 0.44
HSPG2-212ENST00000493940 DEFB132Q7Z7B7 95 aa17.82■□□□□ 0.44
HSPG2-212ENST00000493940 ARHGEF25Q86VW2 580 aa17.82■□□□□ 0.44
HSPG2-212ENST00000493940 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
HSPG2-212ENST00000493940 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
HSPG2-212ENST00000493940 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
HSPG2-212ENST00000493940 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
HSPG2-212ENST00000493940 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
HSPG2-212ENST00000493940 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
HSPG2-212ENST00000493940 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
HSPG2-212ENST00000493940 PARP4Q9UKK3 1724 aaKnown RBP17.79■□□□□ 0.44
HSPG2-212ENST00000493940 MYOM1P52179 1685 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms