RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
HDAC6-234ENST00000493923 ATP7BP35670 1465 aa11.76□□□□□ -0.53
HDAC6-234ENST00000493923 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
HDAC6-234ENST00000493923 UNC5CLQ8IV45 518 aa11.76□□□□□ -0.53
HDAC6-234ENST00000493923 SIN3AQ96ST3 1273 aa11.76□□□□□ -0.53
HDAC6-234ENST00000493923 CRYBG1Q9Y4K1 1723 aa11.76□□□□□ -0.53
HDAC6-234ENST00000493923 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
HDAC6-234ENST00000493923 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
HDAC6-234ENST00000493923 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-234ENST00000493923 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
HDAC6-234ENST00000493923 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
HDAC6-234ENST00000493923 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
HDAC6-234ENST00000493923 SRCAPQ6ZRS2 3230 aa11.73□□□□□ -0.53
HDAC6-234ENST00000493923 TOPAZ1Q8N9V7 1692 aa11.73□□□□□ -0.53
HDAC6-234ENST00000493923 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
HDAC6-234ENST00000493923 STAC3Q96MF2 364 aa11.73□□□□□ -0.53
HDAC6-234ENST00000493923 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
HDAC6-234ENST00000493923 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
HDAC6-234ENST00000493923 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.53
HDAC6-234ENST00000493923 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-234ENST00000493923 NUTM2GQ5VZR2 741 aa11.71□□□□□ -0.53
HDAC6-234ENST00000493923 NGDNQ8NEJ9 315 aaKnown RBP11.71□□□□□ -0.53
HDAC6-234ENST00000493923 ITSN1Q15811 1721 aa11.71□□□□□ -0.54
HDAC6-234ENST00000493923 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
HDAC6-234ENST00000493923 VPS72Q15906 364 aa11.7□□□□□ -0.54
HDAC6-234ENST00000493923 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
HDAC6-234ENST00000493923 ACEP12821 1306 aa11.69□□□□□ -0.54
HDAC6-234ENST00000493923 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-234ENST00000493923 SEPT12Q8IYM1 358 aa11.69□□□□□ -0.54
HDAC6-234ENST00000493923 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
HDAC6-234ENST00000493923 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
HDAC6-234ENST00000493923 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
HDAC6-234ENST00000493923 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
HDAC6-234ENST00000493923 NEUROD1Q13562 356 aa11.68□□□□□ -0.54
HDAC6-234ENST00000493923 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
HDAC6-234ENST00000493923 BTG4Q9NY30 223 aa11.68□□□□□ -0.54
HDAC6-234ENST00000493923 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
HDAC6-234ENST00000493923 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-234ENST00000493923 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
HDAC6-234ENST00000493923 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
HDAC6-234ENST00000493923 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
HDAC6-234ENST00000493923 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
HDAC6-234ENST00000493923 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-234ENST00000493923 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
HDAC6-234ENST00000493923 ONECUT3O60422 494 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-234ENST00000493923 KIAA0232Q92628 1395 aa11.66□□□□□ -0.54
HDAC6-234ENST00000493923 CLSPNQ9HAW4 1339 aa11.65□□□□□ -0.54
HDAC6-234ENST00000493923 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
HDAC6-234ENST00000493923 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
HDAC6-234ENST00000493923 FAM182BQ5T319 152 aa11.65□□□□□ -0.54
HDAC6-234ENST00000493923 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
HDAC6-234ENST00000493923 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
HDAC6-234ENST00000493923 NRKQ7Z2Y5 1582 aa11.64□□□□□ -0.55
HDAC6-234ENST00000493923 PPIP5K1Q6PFW1 1433 aa11.64□□□□□ -0.55
HDAC6-234ENST00000493923 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
HDAC6-234ENST00000493923 SPATA31A5Q5VU36 1347 aa11.63□□□□□ -0.55
HDAC6-234ENST00000493923 SPATA31A7Q8IWB4 1347 aa11.63□□□□□ -0.55
HDAC6-234ENST00000493923 CAPN15O75808 1086 aa11.63□□□□□ -0.55
HDAC6-234ENST00000493923 SRPK2P78362 688 aaKnown RBP11.63□□□□□ -0.55
HDAC6-234ENST00000493923 PRDM11Q9NQV5 511 aa11.63□□□□□ -0.55
HDAC6-234ENST00000493923 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
HDAC6-234ENST00000493923 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
HDAC6-234ENST00000493923 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
HDAC6-234ENST00000493923 CAMTA1Q9Y6Y1 1673 aa11.62□□□□□ -0.55
HDAC6-234ENST00000493923 USP19O94966 1318 aa11.61□□□□□ -0.55
HDAC6-234ENST00000493923 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
HDAC6-234ENST00000493923 LMO7Q8WWI1 1683 aa11.61□□□□□ -0.55
HDAC6-234ENST00000493923 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-234ENST00000493923 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
HDAC6-234ENST00000493923 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
HDAC6-234ENST00000493923 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
HDAC6-234ENST00000493923 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
HDAC6-234ENST00000493923 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
HDAC6-234ENST00000493923 ROCK2O75116 1388 aaKnown RBP11.59□□□□□ -0.55
HDAC6-234ENST00000493923 A0A0G2JS52 829 aa11.59□□□□□ -0.55
HDAC6-234ENST00000493923 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-234ENST00000493923 USP6P35125 1406 aa11.59□□□□□ -0.55
HDAC6-234ENST00000493923 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
HDAC6-234ENST00000493923 AKAP12Q02952 1782 aa11.57□□□□□ -0.56
HDAC6-234ENST00000493923 GCP02774 474 aa11.57□□□□□ -0.56
HDAC6-234ENST00000493923 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
HDAC6-234ENST00000493923 COL18A1P39060 1754 aa11.56□□□□□ -0.56
HDAC6-234ENST00000493923 CPDO75976 1380 aa11.56□□□□□ -0.56
HDAC6-234ENST00000493923 SLIT3O75094 1523 aa11.56□□□□□ -0.56
HDAC6-234ENST00000493923 TNS1Q9HBL0 1735 aaKnown RBP11.56□□□□□ -0.56
HDAC6-234ENST00000493923 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
HDAC6-234ENST00000493923 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
HDAC6-234ENST00000493923 EVC2Q86UK5 1308 aa11.56□□□□□ -0.56
HDAC6-234ENST00000493923 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
HDAC6-234ENST00000493923 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
HDAC6-234ENST00000493923 TTC21BQ7Z4L5 1316 aa11.55□□□□□ -0.56
HDAC6-234ENST00000493923 DSG3P32926 999 aa11.54□□□□□ -0.56
HDAC6-234ENST00000493923 NLRP6P59044 892 aa11.54□□□□□ -0.56
HDAC6-234ENST00000493923 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-234ENST00000493923 NLRP13Q86W25 1043 aa11.54□□□□□ -0.56
HDAC6-234ENST00000493923 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
HDAC6-234ENST00000493923 COL5A2P05997 1499 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-234ENST00000493923 CD163L1Q9NR16 1453 aa11.54□□□□□ -0.56
HDAC6-234ENST00000493923 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
HDAC6-234ENST00000493923 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms