RNA–Protein interactions for RNA: ENST00000493607.1

SERBP1-208, Transcript of SERPINE1 mRNA binding protein 1, human

TSL 2

Gene SERBP1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERBP1-208	ENST00000493607	BRD4	O60885	1362 aa	Predicted RBP	33.25	■■■□□ 2.91
SERBP1-208	ENST00000493607	HAP1	P54257	671 aa	Predicted RBP	33.25	■■■□□ 2.91
SERBP1-208	ENST00000493607	EVC2	Q86UK5	1308 aa		33.25	■■■□□ 2.91
SERBP1-208	ENST00000493607	CABLES1	Q8TDN4	633 aa		33.24	■■■□□ 2.91
SERBP1-208	ENST00000493607	RGS12	O14924	1447 aa		33.24	■■■□□ 2.91
SERBP1-208	ENST00000493607	PPIP5K1	Q6PFW1	1433 aa		33.24	■■■□□ 2.91
SERBP1-208	ENST00000493607	PLCH1	Q4KWH8	1693 aa		33.23	■■■□□ 2.91
SERBP1-208	ENST00000493607	UNC5CL	Q8IV45	518 aa		33.22	■■■□□ 2.91
SERBP1-208	ENST00000493607	CABP2	Q9NPB3	220 aa		33.21	■■■□□ 2.91
SERBP1-208	ENST00000493607	CLSPN	Q9HAW4	1339 aa		33.2	■■■□□ 2.91
SERBP1-208	ENST00000493607	CARD11	Q9BXL7	1154 aa		33.19	■■■□□ 2.9
SERBP1-208	ENST00000493607	PAK3	O75914	559 aa	Predicted RBP	33.18	■■■□□ 2.9
SERBP1-208	ENST00000493607	COL14A1	Q05707	1796 aa	Known RBP	33.18	■■■□□ 2.9
SERBP1-208	ENST00000493607	GJD4	Q96KN9	370 aa	Predicted RBP	33.16	■■■□□ 2.9
SERBP1-208	ENST00000493607	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.16	■■■□□ 2.9
SERBP1-208	ENST00000493607	NRAP	Q86VF7	1730 aa		33.13	■■■□□ 2.89
SERBP1-208	ENST00000493607	ATAD2	Q6PL18	1390 aa		33.12	■■■□□ 2.89
SERBP1-208	ENST00000493607	FAM83G	A6ND36	823 aa		33.12	■■■□□ 2.89
SERBP1-208	ENST00000493607	TIMELESS	Q9UNS1	1208 aa		33.12	■■■□□ 2.89
SERBP1-208	ENST00000493607	GLI3	P10071	1580 aa		33.12	■■■□□ 2.89
SERBP1-208	ENST00000493607	CABP1	Q9NZU7	370 aa		33.11	■■■□□ 2.89
SERBP1-208	ENST00000493607	USP6	P35125	1406 aa		33.11	■■■□□ 2.89
SERBP1-208	ENST00000493607	VPS72	Q15906	364 aa		33.1	■■■□□ 2.89
SERBP1-208	ENST00000493607	AKAP12	Q02952	1782 aa		33.09	■■■□□ 2.89
SERBP1-208	ENST00000493607	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
SERBP1-208	ENST00000493607	SSH2	Q76I76	1423 aa		33.07	■■■□□ 2.88
SERBP1-208	ENST00000493607	USP19	O94966	1318 aa		33.05	■■■□□ 2.88
SERBP1-208	ENST00000493607	PLEKHG5	O94827	1062 aa		33.05	■■■□□ 2.88
SERBP1-208	ENST00000493607	ABTB2	Q8N961	1025 aa		33.05	■■■□□ 2.88
SERBP1-208	ENST00000493607	ZNF692	Q9BU19	519 aa	Predicted RBP	33.05	■■■□□ 2.88
SERBP1-208	ENST00000493607	PUS7	Q96PZ0	661 aa	Known RBP	33.04	■■■□□ 2.88
SERBP1-208	ENST00000493607	NRK	Q7Z2Y5	1582 aa		33.04	■■■□□ 2.88
SERBP1-208	ENST00000493607	SLC24A1	O60721	1099 aa		33.03	■■■□□ 2.88
SERBP1-208	ENST00000493607	NLRP13	Q86W25	1043 aa		33.02	■■■□□ 2.88
SERBP1-208	ENST00000493607	CPSF1	Q10570	1443 aa	Known RBP	33.02	■■■□□ 2.88
SERBP1-208	ENST00000493607	PCGF6	Q9BYE7	350 aa		33.01	■■■□□ 2.87
SERBP1-208	ENST00000493607	ONECUT3	O60422	494 aa	Predicted RBP	33	■■■□□ 2.87
SERBP1-208	ENST00000493607	PRDM11	Q9NQV5	511 aa		33	■■■□□ 2.87
SERBP1-208	ENST00000493607	BTG4	Q9NY30	223 aa		33	■■■□□ 2.87
SERBP1-208	ENST00000493607	CPD	O75976	1380 aa		32.99	■■■□□ 2.87
SERBP1-208	ENST00000493607	KIAA0232	Q92628	1395 aa		32.99	■■■□□ 2.87
SERBP1-208	ENST00000493607	MON2	Q7Z3U7	1717 aa		32.98	■■■□□ 2.87
SERBP1-208	ENST00000493607	PIK3C2A	O00443	1686 aa		32.97	■■■□□ 2.87
SERBP1-208	ENST00000493607	NUTM2G	Q5VZR2	741 aa		32.96	■■■□□ 2.87
SERBP1-208	ENST00000493607	SLIT3	O75094	1523 aa		32.96	■■■□□ 2.87
SERBP1-208	ENST00000493607	TTC21A	Q8NDW8	1320 aa		32.94	■■■□□ 2.86
SERBP1-208	ENST00000493607	BRWD3	Q6RI45	1802 aa		32.93	■■■□□ 2.86
SERBP1-208	ENST00000493607	TESK2	Q96S53	571 aa		32.93	■■■□□ 2.86
SERBP1-208	ENST00000493607	LMO7	Q8WWI1	1683 aa		32.93	■■■□□ 2.86
SERBP1-208	ENST00000493607	GC	P02774	474 aa		32.92	■■■□□ 2.86
SERBP1-208	ENST00000493607	TTC21B	Q7Z4L5	1316 aa		32.91	■■■□□ 2.86
SERBP1-208	ENST00000493607	ST20-MTHFS	A0A0A6YYL1	179 aa		32.9	■■■□□ 2.86
SERBP1-208	ENST00000493607	ZC3H6	P61129	1189 aa	Known RBP	32.9	■■■□□ 2.86
SERBP1-208	ENST00000493607	CCDC9	Q9Y3X0	531 aa	Known RBP	32.9	■■■□□ 2.86
SERBP1-208	ENST00000493607	CD163L1	Q9NR16	1453 aa		32.89	■■■□□ 2.86
SERBP1-208	ENST00000493607	KTN1	Q86UP2	1357 aa	Known RBP	32.89	■■■□□ 2.86
SERBP1-208	ENST00000493607	SPATA31A5	Q5VU36	1347 aa		32.89	■■■□□ 2.86
SERBP1-208	ENST00000493607	SPATA31A7	Q8IWB4	1347 aa		32.89	■■■□□ 2.86
SERBP1-208	ENST00000493607	NLRP6	P59044	892 aa		32.89	■■■□□ 2.86
SERBP1-208	ENST00000493607	NINL	Q9Y2I6	1382 aa		32.88	■■■□□ 2.85
SERBP1-208	ENST00000493607	USP54	Q70EL1	1684 aa		32.88	■■■□□ 2.85
SERBP1-208	ENST00000493607	SEPT12	Q8IYM1	358 aa		32.86	■■■□□ 2.85
SERBP1-208	ENST00000493607	EP400	Q96L91	3159 aa		32.86	■■■□□ 2.85
SERBP1-208	ENST00000493607	CHRNA2	Q15822	529 aa		32.85	■■■□□ 2.85
SERBP1-208	ENST00000493607	CAMTA1	Q9Y6Y1	1673 aa		32.85	■■■□□ 2.85
SERBP1-208	ENST00000493607	USP47	Q96K76	1375 aa		32.84	■■■□□ 2.85
SERBP1-208	ENST00000493607	CCDC125	Q86Z20	511 aa		32.84	■■■□□ 2.85
SERBP1-208	ENST00000493607	THSD7A	Q9UPZ6	1657 aa		32.82	■■■□□ 2.84
SERBP1-208	ENST00000493607	KCNH5	Q8NCM2	988 aa		32.81	■■■□□ 2.84
SERBP1-208	ENST00000493607	USP31	Q70CQ4	1352 aa		32.81	■■■□□ 2.84
SERBP1-208	ENST00000493607	SPATA31A1	Q5TZJ5	1347 aa		32.8	■■■□□ 2.84
SERBP1-208	ENST00000493607	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.8	■■■□□ 2.84
SERBP1-208	ENST00000493607	AATK	Q6ZMQ8	1374 aa		32.8	■■■□□ 2.84
SERBP1-208	ENST00000493607	EDC4	Q6P2E9	1401 aa	Known RBP	32.79	■■■□□ 2.84
SERBP1-208	ENST00000493607	COL18A1	P39060	1754 aa		32.79	■■■□□ 2.84
SERBP1-208	ENST00000493607	SLC12A5	Q9H2X9	1139 aa		32.79	■■■□□ 2.84
SERBP1-208	ENST00000493607	TERF2IP	Q9NYB0	399 aa		32.79	■■■□□ 2.84
SERBP1-208	ENST00000493607	FAM98C	Q17RN3	349 aa	Known RBP	32.77	■■■□□ 2.84
SERBP1-208	ENST00000493607	TMC1	Q8TDI8	760 aa		32.77	■■■□□ 2.84
SERBP1-208	ENST00000493607	COL5A2	P05997	1499 aa	Predicted RBP	32.76	■■■□□ 2.84
SERBP1-208	ENST00000493607	KRT27	Q7Z3Y8	459 aa		32.76	■■■□□ 2.83
SERBP1-208	ENST00000493607	ABCC6	O95255	1503 aa		32.75	■■■□□ 2.83
SERBP1-208	ENST00000493607		A0A1W2PP64	1363 aa		32.74	■■■□□ 2.83
SERBP1-208	ENST00000493607	NFAT5	O94916	1531 aa		32.74	■■■□□ 2.83
SERBP1-208	ENST00000493607	EVA1C	P58658	441 aa		32.74	■■■□□ 2.83
SERBP1-208	ENST00000493607	TMF1	P82094	1093 aa		32.74	■■■□□ 2.83
SERBP1-208	ENST00000493607	CCER1	Q8TC90	406 aa	Predicted RBP	32.74	■■■□□ 2.83
SERBP1-208	ENST00000493607	STRN4	Q9NRL3	753 aa		32.74	■■■□□ 2.83
SERBP1-208	ENST00000493607	BARGIN	Q6ZT62	677 aa		32.72	■■■□□ 2.83
SERBP1-208	ENST00000493607	BLM	P54132	1417 aa	Predicted RBP	32.71	■■■□□ 2.83
SERBP1-208	ENST00000493607	ARHGEF25	Q86VW2	580 aa		32.71	■■■□□ 2.83
SERBP1-208	ENST00000493607	CDCA8	Q53HL2	280 aa		32.7	■■■□□ 2.83
SERBP1-208	ENST00000493607	THRAP3	Q9Y2W1	955 aa	Known RBP	32.7	■■■□□ 2.83
SERBP1-208	ENST00000493607	LARP1	Q6PKG0	1096 aa	Known RBP	32.68	■■■□□ 2.82
SERBP1-208	ENST00000493607		A0A0G2JS52	829 aa		32.67	■■■□□ 2.82
SERBP1-208	ENST00000493607	MYT1	Q01538	1121 aa		32.67	■■■□□ 2.82
SERBP1-208	ENST00000493607	CRB1	P82279	1406 aa		32.67	■■■□□ 2.82
SERBP1-208	ENST00000493607	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
SERBP1-208	ENST00000493607	ANKRD36B	Q8N2N9	1353 aa		32.66	■■■□□ 2.82
SERBP1-208	ENST00000493607	TCP11L2	Q8N4U5	519 aa		32.65	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms