RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 FYB1O15117 783 aa12.86□□□□□ -0.35
CSTF1-206ENST00000493039 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
CSTF1-206ENST00000493039 TTC21BQ7Z4L5 1316 aa12.86□□□□□ -0.35
CSTF1-206ENST00000493039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSTF1-206ENST00000493039 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
CSTF1-206ENST00000493039 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
CSTF1-206ENST00000493039 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
CSTF1-206ENST00000493039 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
CSTF1-206ENST00000493039 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
CSTF1-206ENST00000493039 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
CSTF1-206ENST00000493039 PXDNQ92626 1479 aa12.84□□□□□ -0.35
CSTF1-206ENST00000493039 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
CSTF1-206ENST00000493039 NME9Q86XW9 330 aa12.84□□□□□ -0.35
CSTF1-206ENST00000493039 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
CSTF1-206ENST00000493039 KIF1AQ12756 1690 aa12.84□□□□□ -0.35
CSTF1-206ENST00000493039 MON2Q7Z3U7 1717 aa12.83□□□□□ -0.36
CSTF1-206ENST00000493039 NRKQ7Z2Y5 1582 aa12.83□□□□□ -0.36
CSTF1-206ENST00000493039 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
CSTF1-206ENST00000493039 CC2D1BQ5T0F9 858 aaKnown RBP12.82□□□□□ -0.36
CSTF1-206ENST00000493039 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
CSTF1-206ENST00000493039 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
CSTF1-206ENST00000493039 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
CSTF1-206ENST00000493039 CNGB1Q14028 1251 aaPredicted RBP12.81□□□□□ -0.36
CSTF1-206ENST00000493039 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
CSTF1-206ENST00000493039 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
CSTF1-206ENST00000493039 SCAF1Q9H7N4 1312 aaKnown RBP12.81□□□□□ -0.36
CSTF1-206ENST00000493039 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
CSTF1-206ENST00000493039 TRPM3Q9HCF6 1732 aaPredicted RBP12.8□□□□□ -0.36
CSTF1-206ENST00000493039 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
CSTF1-206ENST00000493039 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
CSTF1-206ENST00000493039 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
CSTF1-206ENST00000493039 NHSL1Q5SYE7 1610 aa12.8□□□□□ -0.36
CSTF1-206ENST00000493039 HOMEZQ8IX15 550 aa12.8□□□□□ -0.36
CSTF1-206ENST00000493039 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
CSTF1-206ENST00000493039 AHDC1Q5TGY3 1603 aaPredicted RBP12.79□□□□□ -0.36
CSTF1-206ENST00000493039 FBLN1P23142 703 aa12.79□□□□□ -0.36
CSTF1-206ENST00000493039 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
CSTF1-206ENST00000493039 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
CSTF1-206ENST00000493039 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
CSTF1-206ENST00000493039 NLRP6P59044 892 aa12.78□□□□□ -0.36
CSTF1-206ENST00000493039 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
CSTF1-206ENST00000493039 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
CSTF1-206ENST00000493039 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
CSTF1-206ENST00000493039 PARD3Q8TEW0 1356 aa12.77□□□□□ -0.36
CSTF1-206ENST00000493039 TNS3Q68CZ2 1445 aa12.77□□□□□ -0.36
CSTF1-206ENST00000493039 NSD2O96028 1365 aa12.76□□□□□ -0.37
CSTF1-206ENST00000493039 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
CSTF1-206ENST00000493039 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
CSTF1-206ENST00000493039 ALS2Q96Q42 1657 aa12.76□□□□□ -0.37
CSTF1-206ENST00000493039 LRRC59Q96AG4 307 aaKnown RBP12.76□□□□□ -0.37
CSTF1-206ENST00000493039 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
CSTF1-206ENST00000493039 HSPA1LP34931 641 aa12.75□□□□□ -0.37
CSTF1-206ENST00000493039 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
CSTF1-206ENST00000493039 MIER1Q8N108 512 aa12.75□□□□□ -0.37
CSTF1-206ENST00000493039 CABLES1Q8TDN4 633 aa12.75□□□□□ -0.37
CSTF1-206ENST00000493039 COG3Q96JB2 828 aa12.75□□□□□ -0.37
CSTF1-206ENST00000493039 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
CSTF1-206ENST00000493039 USP19O94966 1318 aa12.74□□□□□ -0.37
CSTF1-206ENST00000493039 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
CSTF1-206ENST00000493039 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
CSTF1-206ENST00000493039 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
CSTF1-206ENST00000493039 RALBP1Q15311 655 aa12.73□□□□□ -0.37
CSTF1-206ENST00000493039 ANP32CO43423 234 aa12.73□□□□□ -0.37
CSTF1-206ENST00000493039 GCP02774 474 aa12.73□□□□□ -0.37
CSTF1-206ENST00000493039 ARHGEF10O15013 1369 aa12.73□□□□□ -0.37
CSTF1-206ENST00000493039 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
CSTF1-206ENST00000493039 PPP2R1AP30153 589 aa12.72□□□□□ -0.37
CSTF1-206ENST00000493039 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
CSTF1-206ENST00000493039 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
CSTF1-206ENST00000493039 SOX12O15370 315 aa12.72□□□□□ -0.37
CSTF1-206ENST00000493039 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
CSTF1-206ENST00000493039 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
CSTF1-206ENST00000493039 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
CSTF1-206ENST00000493039 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
CSTF1-206ENST00000493039 SLIT3O75094 1523 aa12.7□□□□□ -0.38
CSTF1-206ENST00000493039 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
CSTF1-206ENST00000493039 FBXO41Q8TF61 875 aa12.7□□□□□ -0.38
CSTF1-206ENST00000493039 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
CSTF1-206ENST00000493039 NFAT5O94916 1531 aa12.69□□□□□ -0.38
CSTF1-206ENST00000493039 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
CSTF1-206ENST00000493039 MYBBP1AQ9BQG0 1328 aaKnown RBP12.69□□□□□ -0.38
CSTF1-206ENST00000493039 MAP3K19Q56UN5 1328 aa12.68□□□□□ -0.38
CSTF1-206ENST00000493039 MTHFSP49914 203 aa12.68□□□□□ -0.38
CSTF1-206ENST00000493039 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
CSTF1-206ENST00000493039 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
CSTF1-206ENST00000493039 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
CSTF1-206ENST00000493039 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
CSTF1-206ENST00000493039 JCADQ9P266 1359 aa12.67□□□□□ -0.38
CSTF1-206ENST00000493039 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
CSTF1-206ENST00000493039 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
CSTF1-206ENST00000493039 KIAA0232Q92628 1395 aa12.65□□□□□ -0.38
CSTF1-206ENST00000493039 SMG6Q86US8 1419 aaKnown RBP12.65□□□□□ -0.38
CSTF1-206ENST00000493039 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
CSTF1-206ENST00000493039 PHRF1Q9P1Y6 1649 aaKnown RBP12.64□□□□□ -0.39
CSTF1-206ENST00000493039 FAM83GA6ND36 823 aa12.64□□□□□ -0.39
CSTF1-206ENST00000493039 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
CSTF1-206ENST00000493039 CPDO75976 1380 aa12.64□□□□□ -0.39
CSTF1-206ENST00000493039 CENPBP07199 599 aaPredicted RBP12.64□□□□□ -0.39
CSTF1-206ENST00000493039 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
CSTF1-206ENST00000493039 PEAK1Q9H792 1746 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms